Home Ranges of Rusty Blackbirds Breeding in Wetlands: How Much Would Buffers from Timber Harvest Protect Habitat?

We calculated the home ranges and core areas of 13 adult Rusty Blackbirds (Euphagus carolinus) in Maine to determine (1) the area requirements of breeding adults, (2) whether area requirements of the sexes and of colonial and noncolonial individuals differ, and (3) the proportion of the home range and core area that would be protected by a buffer of no logging of 50–100 m around occupied wetlands. Mean home ranges (37.5 ± 12.6 ha) and core areas (11.1 ± 2.8 ha) were large in comparison to those of other breeding icterids, and adults often foraged in multiple unconnected wetlands. Rusty Blackbirds that were part of a loose colony had home ranges and core areas three times larger than those of pairs that nested solitarily, which we speculate may be due to adults following one other to feed on unpredictable emergences of aquatic insects. Home ranges and core areas included a surprisingly small amount of wetland habitat, only 12% and 19% respectively, but adults often foraged in small wet patches (\u3c16 m2) in otherwise upland habitat. The 75-m buffers around wetlands that we recommended in a concurrent study may help protect the Rusty Blackbird\u27s nesting habitat, but such buffers contained less than half the average home range, suggesting that they may be of only limited benefit as a conservation strategy for protecting foraging habitat

Habitat occupancy of Rusty Blackbirds (Euphagus carolinus) breeding in northern New England, USA

The Rusty Blackbird (Euphagus carolinus), an uncommon songbird often associated with northern coniferous wetlands, has experienced a precipitous population decline since at least the early 20th century. Here, we provide the first analysis of breeding-habitat occupancy at the wetland scale and make recommendations for streamlined monitoring. We modeled occupancy and detectability as a function of site (i.e. habitat-based) and sampling (i.e. visit-specific) variables collected at 546 wetlands in northern New England, USA. Wetland occupancy (mean 6 SE ¼ 0.07 6 0.02 in randomly selected wetlands, and 0.12 6 0.02 in all wetlands surveyed) was best explained by variables describing Rusty Blackbird foraging habitat (PUDDLES: a proxy for shallow water), nesting habitat (coniferous adjacent uplands), and evidence of beavers. In contrast to Rusty Blackbirds’ selection of pole-stage conifers at the nest-site scale, stand age did not affect occupancy at the wetland scale. It appears that most wetlands in northern coniferous forest landscapes, regardless of stand age, offer dense conifer patches nearby and provide suitable breeding habitat if quality foraging sites (e.g., areas of shallow water) also are available. Detectability (0.29 6 0.04) decreased with increasing wind speed, and decreased about fourfold over the course of the breeding season. Rusty Blackbirds responded to broadcast of conspecific vocalizations by flying toward the observer and perching more often than prior to broadcast, demonstrating that broadcasts can be a useful tool to enhance visual detectability. Given our results, observers can now focus site selection on wetlands and sampling conditions most likely to maximize detections of Rusty Blackbirds

Nest-Site Selection and Nest Survival of the Rusty Blackbird: Does Timber Management Adjacent to Wetlands Create Ecological Traps?

Animals are subject to ecological traps when anthropogenic changes create habitat that appears suitable but when selected results in decreased fitness. The Rusty Blackbird (Euphagus carolinus) breeds in boreal wetlands and has declined by 85–95% over the last half century. We studied nest-site selection and daily nest survival rate (DSR) of 43 Rusty Blackbird nests in northern New England and evaluated whether regenerating logged areas adjacent to wetlands created ecological traps. Although nesting adults avoided high-canopied forests and selected areas with dense balsam fir (Abies balasmea) 1 to 3 m high, those characteristics were not associated with DSR. Conversely, the frequency of speckled alder (Alnus incana) and sedges (Cyperaceae) in the nest plot varied with DSR, suggesting that the risk of predation of nests within wetlands was lower. DSR also varied with past logging; nests in plots not harvested recently were 2.3x more likely to fledge young than nests in plots harvested within 20 years. When logging extends to the edges of or into wetlands, the subsequent dense regenerating conifers appear to attract Rusty Blackbirds to nest closer to or within these human-altered uplands, exposing their nests to increased predation not typical of unaltered wetlands. Three surrogates for habitat preference did not differ by timber-management history, suggesting that the birds do not prefer habitats that increase their fitness. Rusty Blackbirds nesting in harvested wetlands may be subject to “equal preference” ecological traps, and we suggest that buffers 75 m wide around the perimeter of suitable wetlands should increase DSR

Survival of the quantum depletion of a Bose-Einstein condensate after release from a magnetic trap

We present observations of quantum depletion in expanding condensates released from a harmonic trap. We confirm experimental observations of slowly-decaying tails in the far-field beyond the thermal component, consistent with the survival of the quantum depletion. Our measurements support the hypothesis that the depletion survives the expansion, and even appears stronger in the far-field than expected before release based on the Bogoliubov theory. This result is in conflict with the hydrodynamic theory which predicts that the in-situ depletion does not survive when atoms are released from a trap. Simulations of our experiment show that the depletion should indeed survive into the far field and become stronger. However, while in qualitative agreement, the final depletion observed in the experiment is much larger than in the simulation. In light of the predicted power-law decay of the momentum density, we discuss general issues inherent in characterizing power laws.Comment: 17 pages, 9 figure

Whole genome sequence and manual annotation of Clostridium autoethanogenum, an industrially relevant bacterium

Clostridium autoethanogenum is an acetogenic bacterium capable of producing high value commodity chemicals and biofuels from the C1 gases present in synthesis gas. This common industrial waste gas can act as the sole energy and carbon source for the bacterium that converts the low value gaseous components into cellular building blocks and industrially relevant products via the action of the reductive acetyl-CoA (Wood-Ljungdahl) pathway. Current research efforts are focused on the enhancement and extension of product formation in this organism via synthetic biology approaches. However, crucial to metabolic modelling and directed pathway engineering is a reliable and comprehensively annotated genome sequence

Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study

Background: Congenital anomalies are the fifth leading cause of mortality in children younger than 5 years globally. Many gastrointestinal congenital anomalies are fatal without timely access to neonatal surgical care, but few studies have been done on these conditions in low-income and middle-income countries (LMICs). We compared outcomes of the seven most common gastrointestinal congenital anomalies in low-income, middle-income, and high-income countries globally, and identified factors associated with mortality. // Methods: We did a multicentre, international prospective cohort study of patients younger than 16 years, presenting to hospital for the first time with oesophageal atresia, congenital diaphragmatic hernia, intestinal atresia, gastroschisis, exomphalos, anorectal malformation, and Hirschsprung's disease. Recruitment was of consecutive patients for a minimum of 1 month between October, 2018, and April, 2019. We collected data on patient demographics, clinical status, interventions, and outcomes using the REDCap platform. Patients were followed up for 30 days after primary intervention, or 30 days after admission if they did not receive an intervention. The primary outcome was all-cause, in-hospital mortality for all conditions combined and each condition individually, stratified by country income status. We did a complete case analysis. // Findings: We included 3849 patients with 3975 study conditions (560 with oesophageal atresia, 448 with congenital diaphragmatic hernia, 681 with intestinal atresia, 453 with gastroschisis, 325 with exomphalos, 991 with anorectal malformation, and 517 with Hirschsprung's disease) from 264 hospitals (89 in high-income countries, 166 in middle-income countries, and nine in low-income countries) in 74 countries. Of the 3849 patients, 2231 (58·0%) were male. Median gestational age at birth was 38 weeks (IQR 36–39) and median bodyweight at presentation was 2·8 kg (2·3–3·3). Mortality among all patients was 37 (39·8%) of 93 in low-income countries, 583 (20·4%) of 2860 in middle-income countries, and 50 (5·6%) of 896 in high-income countries (p<0·0001 between all country income groups). Gastroschisis had the greatest difference in mortality between country income strata (nine [90·0%] of ten in low-income countries, 97 [31·9%] of 304 in middle-income countries, and two [1·4%] of 139 in high-income countries; p≤0·0001 between all country income groups). Factors significantly associated with higher mortality for all patients combined included country income status (low-income vs high-income countries, risk ratio 2·78 [95% CI 1·88–4·11], p<0·0001; middle-income vs high-income countries, 2·11 [1·59–2·79], p<0·0001), sepsis at presentation (1·20 [1·04–1·40], p=0·016), higher American Society of Anesthesiologists (ASA) score at primary intervention (ASA 4–5 vs ASA 1–2, 1·82 [1·40–2·35], p<0·0001; ASA 3 vs ASA 1–2, 1·58, [1·30–1·92], p<0·0001]), surgical safety checklist not used (1·39 [1·02–1·90], p=0·035), and ventilation or parenteral nutrition unavailable when needed (ventilation 1·96, [1·41–2·71], p=0·0001; parenteral nutrition 1·35, [1·05–1·74], p=0·018). Administration of parenteral nutrition (0·61, [0·47–0·79], p=0·0002) and use of a peripherally inserted central catheter (0·65 [0·50–0·86], p=0·0024) or percutaneous central line (0·69 [0·48–1·00], p=0·049) were associated with lower mortality. // Interpretation: Unacceptable differences in mortality exist for gastrointestinal congenital anomalies between low-income, middle-income, and high-income countries. Improving access to quality neonatal surgical care in LMICs will be vital to achieve Sustainable Development Goal 3.2 of ending preventable deaths in neonates and children younger than 5 years by 2030

Mortality from gastrointestinal congenital anomalies at 264 hospitals in 74 low-income, middle-income, and high-income countries: a multicentre, international, prospective cohort study

Summary Background Congenital anomalies are the fifth leading cause of mortality in children younger than 5 years globally. Many gastrointestinal congenital anomalies are fatal without timely access to neonatal surgical care, but few studies have been done on these conditions in low-income and middle-income countries (LMICs). We compared outcomes of the seven most common gastrointestinal congenital anomalies in low-income, middle-income, and high-income countries globally, and identified factors associated with mortality. Methods We did a multicentre, international prospective cohort study of patients younger than 16 years, presenting to hospital for the first time with oesophageal atresia, congenital diaphragmatic hernia, intestinal atresia, gastroschisis, exomphalos, anorectal malformation, and Hirschsprung’s disease. Recruitment was of consecutive patients for a minimum of 1 month between October, 2018, and April, 2019. We collected data on patient demographics, clinical status, interventions, and outcomes using the REDCap platform. Patients were followed up for 30 days after primary intervention, or 30 days after admission if they did not receive an intervention. The primary outcome was all-cause, in-hospital mortality for all conditions combined and each condition individually, stratified by country income status. We did a complete case analysis. Findings We included 3849 patients with 3975 study conditions (560 with oesophageal atresia, 448 with congenital diaphragmatic hernia, 681 with intestinal atresia, 453 with gastroschisis, 325 with exomphalos, 991 with anorectal malformation, and 517 with Hirschsprung’s disease) from 264 hospitals (89 in high-income countries, 166 in middleincome countries, and nine in low-income countries) in 74 countries. Of the 3849 patients, 2231 (58·0%) were male. Median gestational age at birth was 38 weeks (IQR 36–39) and median bodyweight at presentation was 2·8 kg (2·3–3·3). Mortality among all patients was 37 (39·8%) of 93 in low-income countries, 583 (20·4%) of 2860 in middle-income countries, and 50 (5·6%) of 896 in high-income countries (p<0·0001 between all country income groups). Gastroschisis had the greatest difference in mortality between country income strata (nine [90·0%] of ten in lowincome countries, 97 [31·9%] of 304 in middle-income countries, and two [1·4%] of 139 in high-income countries; p≤0·0001 between all country income groups). Factors significantly associated with higher mortality for all patients combined included country income status (low-income vs high-income countries, risk ratio 2·78 [95% CI 1·88–4·11], p<0·0001; middle-income vs high-income countries, 2·11 [1·59–2·79], p<0·0001), sepsis at presentation (1·20 [1·04–1·40], p=0·016), higher American Society of Anesthesiologists (ASA) score at primary intervention (ASA 4–5 vs ASA 1–2, 1·82 [1·40–2·35], p<0·0001; ASA 3 vs ASA 1–2, 1·58, [1·30–1·92], p<0·0001]), surgical safety checklist not used (1·39 [1·02–1·90], p=0·035), and ventilation or parenteral nutrition unavailable when needed (ventilation 1·96, [1·41–2·71], p=0·0001; parenteral nutrition 1·35, [1·05–1·74], p=0·018). Administration of parenteral nutrition (0·61, [0·47–0·79], p=0·0002) and use of a peripherally inserted central catheter (0·65 [0·50–0·86], p=0·0024) or percutaneous central line (0·69 [0·48–1·00], p=0·049) were associated with lower mortality. Interpretation Unacceptable differences in mortality exist for gastrointestinal congenital anomalies between lowincome, middle-income, and high-income countries. Improving access to quality neonatal surgical care in LMICs will be vital to achieve Sustainable Development Goal 3.2 of ending preventable deaths in neonates and children younger than 5 years by 2030

nest-site selection and nest survival of the Rusty Blackbirds: does timber management adjacent to wetlands create ecological traps? condor 112:800–809.

JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. . Abstract. animals are subject to ecological traps when anthropogenic changes create habitat that appears suitable but when selected results in decreased fitness. the Rusty Blackbird (Euphagus carolinus) breeds in boreal wetlands and has declined by 85-95% over the last half century. we studied nest-site selection and daily nestsurvival rate (dSR) of 43 Rusty Blackbird nests in northern new england and evaluated whether regenerating logged areas adjacent to wetlands created ecological traps. although nesting adults avoided high-canopied forests and selected areas with dense balsam fir (Abies balasmea) 1 to 3 m high, those characteristics were not associated with dSR. conversely, the frequency of speckled alder (Alnus incana) and sedges (cyperaceae) in the nest plot varied with dSR, suggesting that the risk of predation of nests within wetlands was lower. dSR also varied with past logging; nests in plots not harvested recently were 2.3× more likely to fledge young than nests in plots harvested within 20 years. when logging extends to the edges of or into wetlands, the subsequent dense regenerating conifers appear to attract Rusty Blackbirds to nest closer to or within these human-altered uplands, exposing their nests to increased predation not typical of unaltered wetlands. three surrogates for habitat preference did not differ by timber-management history, suggesting that the birds do not prefer habitats that increase their fitness. Rusty Blackbirds nesting in harvested wetlands may be subject to &quot;equal preference&quot; ecological traps, and we suggest that buffers 75 m wide around the perimeter of suitable wetlands should increase dSR. Resumen. los animales son sujeto de trampas ecológicas cuando cambios antropogénicos crean un hábitat que parece apropiado pero, al ser seleccionado, resulta en una disminución de la aptitud biológica. Euphagus carolinus se reproduce en humedales boreales y sus poblaciones han disminuido en un 85-95% durante los últimos cincuenta años. estudiamos la selección de sitios de nidificación y la tasa diaria de supervivencia (tdS) de 43 nidos de E. carolinus en el norte de nueva inglaterra y evaluamos si las áreas aprovechadas en recuperación adyacentes a los humedales generaron trampas ecológicas. aunque los adultos que anidaban evitaron bosques de dosel alto y seleccionaron áreas densamente pobladas de Abies balasmea de 1 a 3 m de altura, estas características no estuvieron asociadas con la tdS. por el contrario, la frecuencia de Alnus incana y de ciperáceas en la parcela del nido varió con la tdS, sugiriendo que el riesgo de depredación de los nidos dentro de los humedales era menor. la tdS varió también con los aprovechamientos antiguos; los nidos de las parcelas no cosechadas recientemente tuvieron una probabilidad 2,3 veces mayor de criar pichones que los nidos en parcelas aprovechadas hace 20 años. cuando el aprovechamiento maderero se extiende a los bordes de los humedales o dentro de los mismos, la regeneración posterior de coníferas parece atraer a individuos de E. carolinus a nidificar más cerca o dentro de estas tierras altas alteradas por los humanos, exponiendo sus nidos a una depredación mayor, atípica en humedales inalterados. tres indicadores de preferencia de hábitat demostraron no ser diferentes entre historias de manejo forestal, sugiriendo que las aves no prefieren habitats que incrementen su aptitud biológica. los individuos de E. carolinus que nidifican en humedales aprovechados pueden ser sujeto de trampas ecológicas de &quot;igual preferencia&quot;, y sugerimos que las zonas de amortiguamiento de 75 m de ancho alrededor del perímetro de los humedales adecuados deberían incrementar la tdS. University of California Press an

Habitat occupancy of Rusty Blackbirds ( Euphagus carolinus

The Rusty Blackbird (Euphagus carolinus), an uncommon songbird often associated with northern coniferous wetlands, has experienced a precipitous population decline since at least the early 20th century. Here, we provide the first analysis of breeding-habitat occupancy at the wetland scale and make recommendations for streamlined monitoring. We modeled occupancy and detectability as a function of site (i.e. habitat-based) and sampling (i.e. visit-specific) variables collected at 546 wetlands in northern New England, USA. Wetland occupancy (mean 6 SE ¼ 0.07 6 0.02 in randomly selected wetlands, and 0.12 6 0.02 in all wetlands surveyed) was best explained by variables describing Rusty Blackbird foraging habitat (PUDDLES: a proxy for shallow water), nesting habitat (coniferous adjacent uplands), and evidence of beavers. In contrast to Rusty Blackbirds’ selection of pole-stage conifers at the nest-site scale, stand age did not affect occupancy at the wetland scale. It appears that most wetlands in northern coniferous forest landscapes, regardless of stand age, offer dense conifer patches nearby and provide suitable breeding habitat if quality foraging sites (e.g., areas of shallow water) also are available. Detectability (0.29 6 0.04) decreased with increasing wind speed, and decreased about fourfold over the course of the breeding season. Rusty Blackbirds responded to broadcast of conspecific vocalizations by flying toward the observer and perching more often than prior to broadcast, demonstrating that broadcasts can be a useful tool to enhance visual detectability. Given our results, observers can now focus site selection on wetlands and sampling conditions most likely to maximize detections of Rusty Blackbirds