Analysis of multispectral signatures and investigation of multi-aspect remote sensing techniques

Two major aspects of remote sensing with multispectral scanners (MSS) are investigated. The first, multispectral signature analysis, includes the effects on classification performance of systematic variations found in the average signals received from various ground covers as well as the prediction of these variations with theoretical models of physical processes. The foremost effects studied are those associated with the time of day airborne MSS data are collected. Six data collection runs made over the same flight line in a period of five hours are analyzed, it is found that the time span significantly affects classification performance. Variations associated with scan angle also are studied. The second major topic of discussion is multi-aspect remote sensing, a new concept in remote sensing with scanners. Here, data are collected on multiple passes by a scanner that can be tilted to scan forward of the aircraft at different angles on different passes. The use of such spatially registered data to achieve improved classification of agricultural scenes is investigated and found promising. Also considered are the possibilities of extracting from multi-aspect data, information on the condition of corn canopies and the stand characteristics of forests

Studies of recognition with multitemporal remote sensor data

Characteristics of multitemporal data and their use in recognition processing were investigated. Principal emphasis was on satellite data collected by the LANDSAT multispectral scanner and on temporal changes throughout a growing season. The effects of spatial misregistration on recognition performance with multitemporal data were examined. A capability to compute probabilities of detection and false alarm was developed and used with simulated distributions for misregistered pixels. Wheat detection was found to be degraded and false alarms increased by misregistration effects. Multitemporal signature characteristics and multitemporal recognition processing were studied to gain insights into problems associated with this approach and possible improvements. Recognition performance with one multitemporal data set displayed marked improvements over results from single-time data

Wheat classification exercise, using 11 June 1973, ERTS MSS data for Fayette County, Illinois (for CITARS task)

The prime emphasis was on classification of pixels in field centers, away from boundary effects. Results were encouraging in both training and test field centers for wheat and other major types of vegetation present. However, the location of fields was found to be a serious problem and it was even more difficult to select field-center pixels for fields of sizes less than 20 acres (or even larger, depending upon field shape) for use in the field-center analysis. The majority of fields in the segment are less than 20 acres in size. ERTS-1 data were received on 12 September 1973. Ground truth information and aerial photography were received on 9 and 15 September. The data were analyzed and processed digitally using the ERIM multispectral software system

Target-Dependent Regulation of Retinal Nicotinic Acetylcholine Receptor and Tubulin RNAs During Optic Nerve Regeneration in Goldfish

A fundamental issue in central nervous system development regards the effect of target tissue on the differentiation of innervating neurons. We address this issue by characterizing the role the retinal ganglion cell target, i.e., the optic tectum, plays in regulating expression of tubulin and nicotinic acetylcholine receptor genes in regenerating retinal ganglion cells. Tubulins are involved in axonal growth, whereas nicotinic acetylcholine receptors mediate communication across synapses. Retinal ganglion cell axons were induced to regenerate by crushing the optic nerve. Following crush, there was a rapid increase in a-tubulin RNAs (3 days),-which preceded the increase in nicotinic acetylcholine receptor RNAs (10-15 days). Both classes of RNAs approached control levels by the time retinotectal synapses and functional recovery were restored (4-6 weeks). If the optic nerve was repeatedly crushed or its target ablated, tubulin RNAs remained elevated, and the increase in receptor RNAs that would otherwise be seen 2 weeks after a single nerve crush did not occur. The interaction of retinal ganglion cell axons with their targets in the optic tectum appears, then, to exert a suppressive effect on the RNA encoding a cytoskeletal protein, tubulin, and an inductive effect on RNAs encoding nicotinic acetylcholine receptors involved in synaptic communication.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/66269/1/j.1471-4159.1992.tb09355.x.pd

The role of glycosidically bound mannose in the assimilation of [beta]-galactosidase by generalized gangliosidosis fibroblasts

Bovine testicular [beta]-galactosidase is rapidly assimilated by generalized gangliosidosis skin fibroblasts. The enzyme contains equimolar amounts of mannose and glucosamine and strongly binds to concanavalin A-Sepharose. Pretreatment of [beta]-galactosidase with a mannosidase preparation from reduced the rate of assimilation of the enzyme 97%. These data indicate that mannosyl residues play a role in assimilation of the enzyme. This conclusion is supported by observed inhibition of [beta]-galactosidase assimilation by mannose, methyl [alpha]- and [beta]-mannopyranosides, and mannose-containing testicular glycoproteins.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/21625/1/0000004.pd

A genetically encoded reporter of synaptic activity in vivo

To image synaptic activity within neural circuits, we tethered the genetically encoded calcium indicator (GECI) GCaMP2 to synaptic vesicles by fusion to synaptophysin. The resulting reporter, SyGCaMP2, detected the electrical activity of neurons with two advantages over existing cytoplasmic GECIs: it identified the locations of synapses and had a linear response over a wider range of spike frequencies. Simulations and experimental measurements indicated that linearity arises because SyGCaMP2 samples the brief calcium transient passing through the presynaptic compartment close to voltage-sensitive calcium channels rather than changes in bulk calcium concentration. In vivo imaging in zebrafish demonstrated that SyGCaMP2 can assess electrical activity in conventional synapses of spiking neurons in the optic tectum and graded voltage signals transmitted by ribbon synapses of retinal bipolar cells. Localizing a GECI to synaptic terminals provides a strategy for monitoring activity across large groups of neurons at the level of individual synapses

Studies of the dose-effect relation

Dose-effect relations and, specifically, cell survival curves are surveyed with emphasis on the interplay of the random factors — biological variability, stochastic reaction of the cell, and the statistics of energy deposition —that co-determine their shape. The global parameters mean inactivation dose, , and coefficient of variance, V, represent this interplay better than conventional parameters. Mechanisms such as lesion interaction, misrepair, repair overload, or repair depletion have been invoked to explain sigmoid dose dependencies, but these notions are partly synonymous and are largely undistinguishable on the basis of observed dose dependencies. All dose dependencies reflect, to varying degree, the microdosimetric fluctuations of energy deposition, and these have certain implications, e.g. the linearity of the dose dependence at small doses, that apply regardless of unresolved molecular mechanisms of cellular radiation action

Identification of Key Residues for pH Dependent Activation of Violaxanthin De-Epoxidase from Arabidopsis thaliana

Plants are often exposed to saturating light conditions, which can lead to oxidative stress. The carotenoid zeaxanthin, synthesized from violaxanthin by Violaxanthin De-Epoxidase (VDE) plays a major role in the protection from excess illumination. VDE activation is triggered by a pH reduction in the thylakoids lumen occurring under saturating light. In this work the mechanism of the VDE activation was investigated on a molecular level using multi conformer continuum electrostatic calculations, site directed mutagenesis and molecular dynamics. The pKa values of residues of the inactive VDE were determined to identify target residues that could be implicated in the activation. Five such target residues were investigated closer by site directed mutagenesis, whereas variants in four residues (D98, D117, H168 and D206) caused a reduction in enzymatic activity indicating a role in the activation of VDE while D86 mutants did not show any alteration. The analysis of the VDE sequence showed that the four putative activation residues are all conserved in plants but not in diatoms, explaining why VDE in these algae is already activated at higher pH. Molecular dynamics showed that the VDE structure was coherent at pH 7 with a low amount of water penetrating the hydrophobic barrel. Simulations carried out with the candidate residues locked into their protonated state showed instead an increased amount of water penetrating the barrel and the rupture of the H121–Y214 hydrogen bond at the end of the barrel, which is essential for VDE activation. These results suggest that VDE activation relies on a robust and redundant network, in which the four residues identified in this study play a major role