Slabs in the lower mantle and their modulation of plume formation

Numerical mantle convection models indicate that subducting slabs can reach the core-mantle boundary (CMB) for a wide range of assumed material properties and plate tectonic histories. An increase in lower mantle viscosity, a phase transition at 660 km depth, depth-dependent thermal expansivity, and depth-dependent thermal diffusivity do not preclude model slabs from reaching the CMB. We find that ancient slabs could be associated with lateral temperature anomalies ~500°C cooler than ambient mantle. Plausible increases of thermal conductivity with depth will not cause slabs to diffuse away. Regional spherical models with actual plate evolutionary models show that slabs are unlikely to be continuous from the upper mantle to the CMB, even for radially simple mantle structures. The observation from tomography showing only a few continuous slab-like features from the surface to the CMB may be a result of complex plate kinematics, not mantle layering. There are important consequences of deeply penetrating slabs. Our models show that plumes preferentially develop on the edge of slabs. In areas on the CMB free of slabs, plume formation and eruption are expected to be frequent while the basal thermal boundary layer would be thin. However, in areas beneath slabs, the basal thermal boundary layer would be thicker and plume formation infrequent. Beneath slabs, a substantial amount of hot mantle can be trapped over long periods of time, leading to “mega-plume” formation. We predict that patches of low seismic velocity may be found beneath large-scale high seismic velocity structures at the core-mantle boundary. We find that the location, buoyancy, and geochemistry of mega-plumes will differ from those plumes forming at the edge of slabs. Various geophysical and geochemical implications of this finding are discussed

High quality of bacterial dna extraction from Corbicula fluminea (Müller, 1774) tissue in Kelantan

Corbicula fluminea is a freshwater clam that is served as a popular traditional food in Kelantan, Malaysia. However, there are limited studies that report on high quality bacterial metagenome deoxyribonucleic acid (DNA) from C. fluminea. Therefore, this study compares the effectiveness and efficiency of conventional cetyltrimethylammonium bromide (CTAB) protocol, a commercial kit, and modified CTAB protocol for bacterial DNA extraction from the soft tissue surface of raw C. fluminea. The instruments used to examine the quality of the extracted bacterial DNA were DeNovix DS-11 spectrophotometer, gel electrophoresis machine, and UV transilluminator. The results showed that the bacterial DNA extracted from modified CTAB protocol had the highest purity and integrity with the A260/A280 ratio of 1.92 ± 0.01 and A260/A230 ratio of 1.83 ± 0.06 as well as the DNA band with minimum smear. This concludes that modified CTAB protocol is the best approach for the bacterial extraction from the C. fluminea

Potential of Leucas zeylanica extract to eliminate E. coli and S. aureus in Corbicula fluminea (“Etak”) tissue

“Etak” or Corbicula fluminea, is a freshwater mollusc species regularly consumed as a popular snack among the Kelantanese in Malaysia. The “etak” is usually heated with traditional smoking process which is considered as half cooked and the smoked C. fluminea is commonly known as “etak salai”. This study focuses on the potential of Leucas zeylanica leaves extract to eliminate the bacteria content in “etak salai”. Extraction of bacterial genomic DNA was performed and confirmed the existence of Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus) in “etak salai”. Antibacterial properties of L. zeylanica leaves extract was identified using disc diffusion assay and the result obtained exhibit that 70 μg/μL of L. zeylanica extract was the optimum concentration to give the effect of 11 mm inhibition zone for E. coli and 15 mm inhibition zone for S. aureus. This finding proof that L. zeylanica leaves could be the ingredients in the paste for “etak salai” preparation

Silver-based surface plasmon waveguide for terahertz quantum cascade lasers

Terahertz quantum cascade lasers (THz QCLs) have undergone rapid developments since their first demonstration in 2002. Presently, the wide spectral range (1.2–5.2 THz) and high output power (1 W) make THz QCLs promising sources for applications in high-resolution spectroscopy and THz imaging. However, their maximum operating temperature is only 199.5 K and therefore cryogenic cooling is still needed. Improving the thermal performance of THz QCLs is a key challenge for their practical usage. The waveguide loss is closely related with the device thermal performance. To lower the loss, copper has been used to replace the gold in the standard metal–metal waveguide scheme, and around 10 K increase in the maximum lasing temperature has been achieved. Here, we employ silver as the waveguide metal and investigate its effects on devices with a single surface-plasmon waveguide configuration

Use of archival versus newly collected tumor samples for assessing PD-L1 expression and overall survival : an updated analysis of KEYNOTE-010 trial

Background: In KEYNOTE-010, pembrolizumab versus docetaxel improved overall survival (OS) in patients with programmed death-1 protein (PD)-L1-positive advanced non-small-cell lung cancer (NSCLC). A prespecified exploratory analysis compared outcomes in patients based on PD-L1 expression in archival versus newly collected tumor samples using recently updated survival data. Patients and methods: PD-L1 was assessed centrally by immunohistochemistry (22C3 antibody) in archival or newly collected tumor samples. Patients received pembrolizumab 2 or 10 mg/kg Q3W or docetaxel 75 mg/m2 Q3W for 24 months or until progression/intolerable toxicity/other reason. Response was assessed by RECIST v1.1 every 9 weeks, survival every 2 months. Primary end points were OS and progression-free survival (PFS) in tumor proportion score (TPS) 50% and 1%; pembrolizumab doses were pooled in this analysis. Results: At date cut-off of 24 March 2017, median follow-up was 31 months (range 23-41) representing 18 additional months of follow-up from the primary analysis. Pembrolizumab versus docetaxel continued to improve OS in patients with previously treated, PD-L1-expressing advanced NSCLC; hazard ratio (HR) was 0.66 [95% confidence interval (CI): 0.57, 0.77]. Of 1033 patients analyzed, 455(44%) were enrolled based on archival samples and 578 (56%) on newly collected tumor samples. Approximately 40% of archival samples and 45% of newly collected tumor samples were PD-L1 TPS 50%. For TPS 50%, the OS HRs were 0.64 (95% CI: 0.45, 0.91) and 0.40 (95% CI: 0.28, 0.56) for archival and newly collected samples, respectively. In patients with TPS 1%, OS HRs were 0.74 (95% CI: 0.59, 0.93) and 0.59 (95% CI: 0.48, 0.73) for archival and newly collected samples, respectively. In TPS 50%, PFS HRs were similar across archival [0.63 (95% CI: 0.45, 0.89)] and newly collected samples [0.53 (95% CI: 0.38, 0.72)]. In patients with TPS 1%, PFS HRs were similar across archival [0.82 (95% CI: 0.66, 1.02)] and newly collected samples [0.83 (95% CI: 0.68, 1.02)]. Conclusion: Pembrolizumab continued to improve OS over docetaxel in intention to treat population and in subsets of patients with newly collected and archival samples

Terahertz frequency quantum cascade lasers for use as waveguide-integrated local oscillators

Since their first demonstration in 2002, the performance of terahertz frequency quantum cascade lasers has developed extremely rapidly. We consider the potential use of terahertz frequency quantum cascade lasers as local oscillators in satellite-borne instrumentation for future Earth observation and planetary science missions. A specific focus will be on the development of compact, waveguide-integrated, heterodyne detection systems for the supra-terahertz range

Feedhorn-integrated THz QCL local oscillators for the LOCUS atmospheric sounder

The LOCUS atmospheric sounder is a satellite-borne THz radiometer concept, for studying molecular species in the mesosphere and lower thermosphere. We report waveguide-integrated THz quantum-cascade lasers for use as 3.5 THz local oscillators. A waveguide-integration scheme, using an integrated diagonal feedhorn significantly improves power outcoupling. 1.3 mW THz emission is demonstrated in a space-qualified Stirling cryocooler at 57 K, with ∼15° beam divergence

Extraction-controlled terahertz frequency quantum cascade lasers with a diagonal LO-phonon extraction and injection stage

We report an extraction-controlled terahertz (THz)-frequency quantum cascade laser design in which a diagonal LO-phonon scattering process is used to achieve efficient current injection into the upper laser level of each period and simultaneously extract electrons from the adjacent period. The effects of the diagonality of the radiative transition are investigated, and a design with a scaled oscillator strength of 0.45 is shown experimentally to provide the highest temperature performance. A 3.3 THz device processed into a double-metal waveguide configuration operated up to 123 K in pulsed mode, with a threshold current density of 1.3 kA/cm2 at 10 K. The QCL structures are modeled using an extended density matrix approach, and the large threshold current is attributed to parasitic current paths associated with the upper laser levels. The simplicity of this design makes it an ideal platform to investigate the scattering injection process

Mid-infrared plasmons in scaled graphene nanostructures

Plasmonics takes advantage of the collective response of electrons to electromagnetic waves, enabling dramatic scaling of optical devices beyond the diffraction limit. Here, we demonstrate the mid-infrared (4 to 15 microns) plasmons in deeply scaled graphene nanostructures down to 50 nm, more than 100 times smaller than the on-resonance light wavelength in free space. We reveal, for the first time, the crucial damping channels of graphene plasmons via its intrinsic optical phonons and scattering from the edges. A plasmon lifetime of 20 femto-seconds and smaller is observed, when damping through the emission of an optical phonon is allowed. Furthermore, the surface polar phonons in SiO2 substrate underneath the graphene nanostructures lead to a significantly modified plasmon dispersion and damping, in contrast to a non-polar diamond-like-carbon (DLC) substrate. Much reduced damping is realized when the plasmon resonance frequencies are close to the polar phonon frequencies. Our study paves the way for applications of graphene in plasmonic waveguides, modulators and detectors in an unprecedentedly broad wavelength range from sub-terahertz to mid-infrared.Comment: submitte