Leaching of Mycobacterium avium Subsp paratuberculosis in Soil under In Vitro Conditions

Mycobacterium avium subsp paratuberculosis (Map), the causative agent of Johne's disease, has a robust ability to survive in the environment. However, the ability of Map to migrate through soil to drainage tiles or ground water, leave the farm, and leak into local watersheds is inadequately documented. In order to assess the ability of Map to leach through soil, two laboratory experiments were conducted. In the first study, 8 columns (30 cm long each) of a sandy loam soil were treated with pure cultures of Map. Two soil moisture levels and two Map concentrations were used. The columns were leached with 500 mL of water once a week for three weeks, the leachate was collected, and detection analysis was conducted. In the second experiment, manure from Map negative cows (control) and Map high shedder cows (treatment) were deposited on 8 similar columns and the columns were leached with 500 mL of water once a week for four weeks. Map detection and numeration in leachate samples were done with RT-PCR and culture techniques, respectively. Using RT-PCR, Map could be detected in the leachates in both experiments for several weeks but could only be recovered using culture techniques in experiment one. Combined, these experiments indicate the potential for Map to move through soil as a result of rainfall or irrigation following application

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Mycobacterium avium subsp paratuberculosis (Map), the causative agent of Johne's disease, has a robust ability to survive in the environment. However, the ability of Map to migrate through soil to drainage tiles or ground water, leave the farm, and leak into local watersheds is inadequately documented. In order to assess the ability of Map to leach through soil, two laboratory experiments were conducted. In the first study, 8 columns (30 cm long each) of a sandy loam soil were treated with pure cultures of Map. Two soil moisture levels and two Map concentrations were used. The columns were leached with 500 mL of water once a week for three weeks, the leachate was collected, and detection analysis was conducted. In the second experiment, manure from Map negative cows (control) and Map high shedder cows (treatment) were deposited on 8 similar columns and the columns were leached with 500 mL of water once a week for four weeks. Map detection and numeration in leachate samples were done with RT-PCR and culture techniques, respectively. Using RT-PCR, Map could be detected in the leachates in both experiments for several weeks but could only be recovered using culture techniques in experiment one. Combined, these experiments indicate the potential for Map to move through soil as a result of rainfall or irrigation following application

Laboratory-Scale Study on the Effects of Freezing in Soils when Subjected to Different Moisture Content

This study was undertaken to investigate how soil characteristics and moisture content impact the freezing process in soils that are common in Georgia, United States. Three soil types (sand, loam, clay loam) with a water content of 30% or 40% field capacity were subjected to temperatures of −1.0 °C, −1.5 °C and −2.0 °C, respectively, in a freezing chamber. The three soil types revealed unique freezing profiles at both 30% and 40% field capacity. In general, all soil types at 40% field capacity remained at higher temperatures for longer periods of time compared to the same soil type at 30% field capacity. The loam soil at 40% WHC (water holding capacity) took the longest time to reach all four threshold temperatures. Both the soil texture and amount of water available for freezing affected the time each soil and water combination took to reach the threshold temperatures. These results have practical implications for the ornamental landscape industry and gardeners in subtropical climates where annual flowers are commonly grown in winter color beds. Since subfreezing soil temperatures are not as common in subtropical areas as they are in more northern climates, especially in recent decades, it would be worthwhile to examine the impact of additional factors such as organic content and nutrition on freezing processes in subtropical soils

Ammonia-oxidizer communities in an agricultural soil treated with contrasting nitrogen sources

The community of ammonia-oxidizing prokaryotes was examined in an agricultural soil treated for six seasons with contrasting nitrogen (N) sources. Molecular tools based on the genes encoding ammonia monooxygenase were used to characterize the ammonia oxidizer (AO) communities and their abundance. Soil DNA was extracted from soils sampled from silage corn plots that received no additional N (control), dairy waste compost, liquid dairy waste (LW), and ammonium sulfate (AS) treatments at approximately 100 and 200 kg available N ha(-1) over 6 years. The N treatment affected the quantity of AO based on estimates of amoA by real-time PCR. Ammonia oxidizing bacteria (AOB) were higher in soils from the AS200, AS100, and LW200 treatments (2.5 × 10(7), 2.5 × 10(7), and 2.1 × 10(7)copies g(-1) soil, respectively) than in the control (8.1 × 10(6) copies g(-1) soil) while the abundance of amoA encoding archaea [ammonia oxidizing archaea (AOA)] was not significantly affected by treatment (3.8 × 10(7) copies g(-1) soil, average). The ratio of AOA/AOB was higher in the control and compost treated soils, both treatments have the majority of their ammonium supplied through mineralization of organic nitrogen. Clone libraries of partial amoA sequences indicated AOB related to Nitrosospira multiformis and AOA related to uncultured Nitrososphaera similar to those described by soil fosmid 54d9 were prevalent. Profiles of the amoC-amoA intergenic region indicated that both Nitrosospira- and Nitrosomonas-type AOB were present in all soils examined. In contrast to the intergenic amoC-amoA profile results, Nitrosomonas-like clones were recovered only in the LW200 treated soil-DNA. The impact of 6 years of contrasting nitrogen sources applications caused changes in AO abundance while the community composition remained relatively stable for both AOB and AOA

Preliminary Study on the Effect of Wastewater Storage in Septic Tank on E. coli Concentration in Summer

On-site wastewater treatment systems (OWTS) work by first storing the wastewater in a septic tank before releasing it to soils for treatment that is generally effective and sustainable. However, it is not clear how the abundance of E. coli changes during its passage through the tank. In this study, which was conducted under the UGA young Scholar Program in summer of 2010, we examined the change in wastewater quality parameters during the passage of the wastewater through the tank and after its release into soil. We collected wastewater samples at the inlet and outlet of an experimental septic tank in addition to obtaining water samples from lysimeters below trenches where the drainpipes were buried. We report that E. coli concentration was higher by 100-fold in the septic tank effluent than influent wastewater samples, indicating the growth of E. coli inside the tank under typical Georgian summer weather. This is contrary to the assumption that E. coli cells do not grow outside their host and suggests that the microbial load of the wastewater is potentially enhanced during its storage in the tank. Electrical conductivity, pH and nitrogen were similar between the influent and effluent wastewater samples. E. coli and total coliform concentrations were mainly below detection in lysimeter samples, indicating the effectiveness of the soil in treating the wastewater

Hepatic Transcriptome Responses in Mice (<i>Mus musculus</i>) Exposed to the Nafion Membrane and Its Combustion Products

<div><p>Nafion 117 membrane (N117), an important polymer electrolyte membrane (PEM), has been widely used for numerous chemical technologies. Despite its increasing production and use, the toxicity data for N117 and its combustion products remain lacking. Toxicity studies are necessary to avoid problems related to waste disposal in landfills and incineration that may arise. In this study, we investigated the histopathological alterations, oxidative stress biomarker responses, and transcriptome profiles in the liver of male mice exposed to N117 and its combustion products for 24 days. An ion-chromatography system and liquid chromatography system coupled to a hybrid quadrupole time-of-flight mass spectrometry were used to analyze the chemical compositions of these combustion products. The transcriptomics analysis identified several significantly altered molecular pathways, including the metabolism of xenobiotics, carbohydrates and lipids; signal transduction; cellular processes; immune system; and signaling molecules and interaction. These studies provide preliminary data for the potential toxicity of N117 and its combustion products on living organisms and may fill the information gaps in the toxicity databases for the currently used PEMs.</p></div

Nutrient Sufficiency Ranges for Corn at the Early Growth Stage: Implications for Nutrient Management

Growers rely on nutrient sufficiency ranges (NSRs) after plant tissue analysis to inform timely nutrient management decisions. The NSRs are typically established from survey studies across multiple locations, which could be confounded by several abiotic and biotic factors. We conducted field studies in 2020, 2021, and 2022 to validate the lower thresholds of the NSRs for corn (Zea mays) at the early growth stage as reported in the Southern Cooperative Series Bulletin #394. We induced various corn nutritional levels by making different nutrient application rates. If the NSRs are valid, samples within the same replication that satisfy the NSRs of all nutrients should have similar biomass accumulation. The results showed that the NSRs were not valid under the conditions tested. In total, 47.6% of the samples satisfied all the lower thresholds of the NSRs, and 25.4% of those samples had relative biomass <50%, with relative biomass even as low as 24.2% observed. Moreover, 9.6% of the total samples had P and Cu levels that failed to meet the lower threshold but still had relative biomass ≥75%. The findings highlight the sensitivity of corn to nutrient imbalance and the need to optimize nutrient diagnostic methods at the early growth stage