Overview of the Processes driving Exchange At Cape Hatteras Program

© The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Seim, H., Savidge, D., Andres, M., Bane, J., Edwards, C., Gawarkiewicz, G., He, R., Todd, R., Muglia, M., Zambon, J., Han, L., & Mao, S. Overview of the Processes driving Exchange at Cape Hatteras Program. Oceanography, (2022), https://doi.org/10.5670/oceanog.2022.205.The Processes driving Exchange At Cape Hatteras (PEACH) program seeks to better understand seawater exchanges between the continental shelf and the open ocean near Cape Hatteras, North Carolina. This location is where the Gulf Stream transitions from a boundary-trapped current to a free jet, and where robust along-shelf convergence brings cool, relatively fresh Middle Atlantic Bight and warm, salty South Atlantic Bight shelf waters together, forming an important and dynamic biogeographic boundary. The magnitude of this convergence implies large export of shelf water to the open ocean here. Background on the oceanography of the region provides motivation for the study and gives context for the measurements that were made. Science questions focus on the roles that wind forcing, Gulf Stream forcing, and lateral density gradients play in driving exchange. PEACH observational efforts include a variety of fixed and mobile observing platforms, and PEACH modeling included two different resolutions and data assimilation schemes. Findings to date on mean circulation, the nature of export from the southern Middle Atlantic Bight shelf, Gulf Stream variability, and position variability of the Hatteras Front are summarized, together with a look ahead to forthcoming analyses.We gratefully acknowledge NSF funding (OCE-1558920 to UNC-CH, OCE-1559476 to SkIO, OCE-1558521 to WHOI, OCE-1559178 to NCSU); technical support from Sara Haines, Craig Marquette, Trip Patterson, Nick DeSimone, Erran Sousa, Gabe Matthias, Patrick Deane, Brian Hogue, Frank Bahr, and Ben Hefner; cruise participants Jacob Forsyth, Joleen Heiderich, Chuxuan Li, Marco Valero, Lauren Ball, John McCord, and Kyle Maddux-Lawrence; and the crew of R/V Armstrong for their able support during three PEACH cruises

Quantifying vertical mixing in estuaries

© 2008 The Authors. This is an open-access article distributed under the terms of the Creative Commons Attribution Noncommercial License. The definitive version was published in Environmental Fluid Mechanics 8 (2008): 495-509, doi:10.1007/s10652-008-9107-2.Estuarine turbulence is notable in that both the dissipation rate and the buoyancy frequency extend to much higher values than in other natural environments. The high dissipation rates lead to a distinct inertial subrange in the velocity and scalar spectra, which can be exploited for quantifying the turbulence quantities. However, high buoyancy frequencies lead to small Ozmidov scales, which require high sampling rates and small spatial aperture to resolve the turbulent fluxes. A set of observations in a highly stratified estuary demonstrate the effectiveness of a vessel-mounted turbulence array for resolving turbulent processes, and for relating the turbulence to the forcing by the Reynolds-averaged flow. The observations focus on the ebb, when most of the buoyancy flux occurs. Three stages of mixing are observed: (1) intermittent and localized but intense shear instability during the early ebb; (2) continuous and relatively homogeneous shear-induced mixing during the mid-ebb, and weakly stratified, boundary-layer mixing during the late ebb. The mixing efficiency as quantified by the flux Richardson number Rf was frequently observed to be higher than the canonical value of 0.15 from Osborn (J Phys Oceanogr 10:83–89, 1980). The high efficiency may be linked to the temporal–spatial evolution of shear instabilities.The funding for this research was obtained from ONR Grant N00014-06-1-0292 and NSF Grant OCE-0729547

Cold event in the South Atlantic Bight during summer of 2003 : model simulations and implications

Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): C05022, doi:10.1029/2006JC003903.A set of model simulations are used to determine the principal forcing mechanisms that resulted in anomalously cold water in the South Atlantic Bight (SAB) in the summer of 2003. Updated mass field and elevation boundary conditions from basin-scale Hybrid Coordinate Ocean Model (HYCOM) simulations are compared to climatological forcing to provide offshore and upstream influences in a one-way nesting sense. Model skill is evaluated by comparing model results with observations of velocity, water level, and surface and bottom temperature. Inclusion of realistic atmospheric forcing, river discharge, and improved model dynamics produced good skill on the inner shelf and midshelf. The intrusion of cold water onto the shelf occurred predominantly along the shelf-break associated with onshore flow in the southern part of the domain north of Cape Canaveral (29° to 31.5°). The atmospheric forcing (anomalously strong and persistent upwelling-favorable winds) was the principal mechanism driving the cold event. Elevated river discharge increased the level of stratification across the inner shelf and midshelf and contributed to additional input of cold water into the shelf. The resulting pool of anomalously cold water constituted more than 50% of the water on the shelf in late July and early August. The excess nutrient flux onto the shelf associated with the upwelling was approximated using published nitrate-temperature proxies, suggesting increased primary production during the summer over most of the SAB shelf.The preparation of this paper was primarily supported by the Southeast Atlantic Coastal Ocean Observing System (SEACOOS) and the South Atlantic Bight Limited Area Model (SABLAM). SEACOOS is a collaborative, regional program sponsored by the Office of Naval Research under award N00014-02-1-0972 and managed by the University of North Carolina-General Administration. SABLAM was sponsored by the National Ocean Partnership Program (award NAG 13-00041). Data from ship surveys were collected and processed with the support from NSF grant OCE-0099167 (J. R. Nelson), NSF grant OCE-9982133 (J. O. Blanton, SkIO), NASA grant NAG-10557 (J. R. Nelson), and SEACOOS. NOAA NDBC buoy data and NOS coastal water level records were obtained through NOAA-supported data archives and web portals. Moored instrument data from the Carolina Coastal Ocean Observation and Prediction System (Caro-COOPS) were acquired from the system’s website (http://www.carocoops.org). Caro-COOPS is sponsored by NOAA grant NA16RP2543

The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights

Antarctic krill (Euphausia superba) is Earth’smost abundant wild animal, and its enormous biomass is vital to the Southern Ocean ecosystem. Here, we report a 48.01-Gb chromosome-level Antarctic krill genome, whose large genome size appears to have resulted from inter-genic transposable element expansions. Our assembly reveals the molecular architecture of the Antarctic krill circadian clock and uncovers expanded gene families associated with molting and energy metabolism, providing insights into adaptations to the cold and highly seasonal Antarctic environment. Population-level genome re-sequencing from four geographical sites around the Antarctic continent reveals no clear population structure but highlights natural selection associated with environmental variables. An apparent drastic reduction in krill population size 10 mya and a subsequent rebound 100 thousand years ago coincides with climate change events. Our findings uncover the genomic basis of Antarctic krill adaptations to the Southern Ocean and provide valuable resources for future Antarctic research

Global perspectives on observing ocean boundary current systems

Ocean boundary current systems are key components of the climate system, are hometo highly productive ecosystems, and have numerous societal impacts. Establishmentof a global network of boundary current observing systems is a critical part of ongoingdevelopment of the Global Ocean Observing System. The characteristics of boundarycurrent systems are reviewed, focusing on scientific and societal motivations forsustained observing. Techniques currently used to observe boundary current systemsare reviewed, followed by a census of the current state of boundary current observingsystems globally. The next steps in the development of boundary current observingsystems are considered, leading to several specific recommendations

Velocity Comparisons from Upward and Downward Acoustic Doppler Current Profilers on the West Florida Shelf

Current observations are compared from upward- and downward-looking acoustic Doppler current profilers (ADCPs) deployed on the West Florida Shelf (WFS). Despite regional differences, statistical analyses show good agreement between all sets of observations throughout the water column except in the upper few meters where all downward-looking ADCPs exhibit small, but significant, reduction in rms speed values. Evidence suggests that this reduction is mooring related. It is possible that the presence of near-surface bubbles caused by wave activity could bias the near-surface observations. Otherwise, either the upward- or downward-looking mooring systems produce equivalent observations with differences due to spatial variations

Towards a Regional Coastal Ocean Observing System: an Initial Design for the Southeast Coastal Ocean Observing Regional Association

A conceptual design for a southeast United States regional coastal ocean observing system (RCOOS) is built upon a partnership between institutions of the region and among elements of the academic, government and private sectors. This design envisions support of a broad range of applications (e.g., marine operations, natural hazards, and ecosystem-based management) through the routine operation of predictive models that utilize the system observations to ensure their validity. A distributed information management system enables information flow, and a centralized information hub serves to aggregate information regionally and distribute it as needed. A variety of observing assets are needed to satisfy model requirements. An initial distribution of assets is proposed that recognizes the physical structure and forcing in the southeast U.S. coastal ocean. In-situ data collection includes moorings, profilers and gliders to provide 3D, time-dependent sampling, HF radar and surface drifters for synoptic sampling of surface currents, and satellite remote sensing of surface ocean properties. Nested model systems are required to properly represent ocean conditions from the outer edge of the EEZ to the watersheds. An effective RCOOS will depend upon a vital National Backbone (federally supported) system of in situ and satellite observations, model products, and data management. This dependence highlights the needs for a clear definition of the National Backbone components and a Concept of Operations (CONOPS) that defines the roles, functions and interactions of regional and federal components of the integrated system. A preliminary CONOPS is offered for the Southeast (SE) RCOOS. Thorough system testing is advocated using a combination of application-specific and process-oriented experiments. Estimates of costs and personnel required as initial components of the SE RCOOS are included. Initial thoughts on the Research and Development program required to support the RCOOS are also outlined