1,314 research outputs found
Molecular systematics of the cotton root rot pathogen, Phymatotrichopsis omnivora
Cotton root rot is an important soilborne disease of cotton and numerous dicot plants in the south-western United States and Mexico. The causal organism, Phymatotrichopsis omnivora (= Phymatotrichum omnivorum), is known only as an asexual, holoanamorphic (mitosporic) fungus, and produces conidia resembling those of Botrytis. Although the corticoid basidiomycetes Phanerochaete omnivora (Polyporales) and Sistotrema brinkmannii (Cantharellales; both Agaricomycetes) have been suggested as teleomorphs of Phymatotrichopsis omnivora, phylogenetic analyses of nuclear small- and large-subunit ribosomal DNA and subunit 2 of RNA polymerase II from multiple isolates indicate that it is neither a basidiomycete nor closely related to other species of Botrytis (Sclerotiniaceae, Leotiomycetes). Phymatotrichopsis omnivora is a member of the family Rhizinaceae, Pezizales (Ascomycota: Pezizomycetes) allied to Psilopezia and Rhizina
Microscopic multicluster description of neutron-halo nuclei with a stochastic variational method
To test a multicluster approach for halo nuclei, we give a unified
description for the ground states of He and He in a model comprising an
cluster and single-neutron clusters. The intercluster wave function is
taken a superposition of terms belonging to different arrangements, each
defined by a set of Jacobi coordinates. Each term is then a superposition of
products of gaussian functions of the individual Jacobi coordinates with
different widths, projected to angular momenta or 1. To avoid excessively
large dimensions and ``overcompleteness", stochastic methods were tested for
selecting the gaussians spanning the basis. For He, we were able to
calculate ground-state energies that are virtully exact within the subspace
defined by the arrangements and values, and we found that preselected
random sets of bases (with or without simulated annealing) yield excellent
numerical convergence to this ``exact" value with thoroughly truncated bases.
For He good energy convergence was achieved in a state space comprising
three arrangements with all , and there are indications showing that the
contributions of other subspaces are likely to be small. The He and He
energies are reproduced by the same effective force very well, and the matter
radii obtained are similar to those of other sophisticated calculations.Comment: Latex , 8 figures available on request, ATOMKI-4-1993-
Adsorption-desorption kinetics in nanoscopically confined oligomer films under shear
The method of molecular dynamics computer simulations is employed to study oligomer melts confined in ultra-thin films and subjected to shear. The focus is on the self-diffusion of oligomers near attractive surfaces and on their desorption, together with the effects of increasing energy of adsorption and shear. It is found that the mobility of the oligomers near an attractive surface is strongly decreased. Moreover, although shearing the system forces the chains to stretch parallel to the surfaces and thus increase the energy of adsorption per chain, flow also promotes desorption. The study of chain desorption kinetics reveals the molecular processes responsible for the enhancement of desorption under shear. They involve sequences of conformations starting with a desorbed tail and proceeding in a very fast, correlated, segment-by-segment manner to the desorption of the oligomers from the surfaces.
Meteorological effects of the solar eclipse of 20 March 2015: analysis of UK Met Office automatic weather station data and comparison with automatic weather station data from the Faroes and Iceland.
Here, we analyse high-frequency (1 min) surface air temperature, mean sea-level pressure (MSLP), wind speed and direction and cloud-cover data acquired during the solar eclipse of 20 March 2015 from 76 UK Met Office weather stations, and compare the results with those from 30 weather stations in the Faroe Islands and 148 stations in Iceland. There was a statistically significant mean UK temperature drop of 0.83±0.63°C, which occurred over 39 min on average, and the minimum temperature lagged the peak of the eclipse by about 10 min. For a subset of 14 (16) relatively clear (cloudy) stations, the mean temperature drop was 0.91±0.78 (0.31±0.40)°C but the mean temperature drops for relatively calm and windy stations were almost identical. Mean wind speed dropped significantly by 9% on average during the first half of the eclipse. There was no discernible effect of the eclipse on the wind-direction or MSLP time series, and therefore we can discount any localized eclipse cyclone effect over Britain during this event. Similar changes in air temperature and wind speed are observed for Iceland, where conditions were generally clearer, but here too there was no evidence of an eclipse cyclone; in the Faroes, there was a much more muted meteorological signature.This article is part of the themed issue 'Atmospheric effects of solar eclipses stimulated by the 2015 UK eclipse'
Polynomial kernels for 3-leaf power graph modification problems
A graph G=(V,E) is a 3-leaf power iff there exists a tree T whose leaves are
V and such that (u,v) is an edge iff u and v are at distance at most 3 in T.
The 3-leaf power graph edge modification problems, i.e. edition (also known as
the closest 3-leaf power), completion and edge-deletion, are FTP when
parameterized by the size of the edge set modification. However polynomial
kernel was known for none of these three problems. For each of them, we provide
cubic kernels that can be computed in linear time for each of these problems.
We thereby answer an open problem first mentioned by Dom, Guo, Huffner and
Niedermeier (2005).Comment: Submitte
Neutron scattering and molecular correlations in a supercooled liquid
We show that the intermediate scattering function for neutron
scattering (ns) can be expanded naturely with respect to a set of molecular
correlation functions that give a complete description of the translational and
orientational two-point correlations in the liquid. The general properties of
this expansion are discussed with special focus on the -dependence and hints
for a (partial) determination of the molecular correlation functions from
neutron scattering results are given. The resulting representation of the
static structure factor is studied in detail for a model system using
data from a molecular dynamics simulation of a supercooled liquid of rigid
diatomic molecules. The comparison between the exact result for and
different approximations that result from a truncation of the series
representation demonstrates its good convergence for the given model system. On
the other hand it shows explicitly that the coupling between translational
(TDOF) and orientational degrees of freedom (ODOF) of each molecule and
rotational motion of different molecules can not be neglected in the
supercooled regime.Further we report the existence of a prepeak in the
ns-static structure factor of the examined fragile glassformer, demonstrating
that prepeaks can occur even in the most simple molecular liquids. Besides
examining the dependence of the prepeak on the scattering length and the
temperature we use the expansion of into molecular correlation
functions to point out intermediate range orientational order as its principle
origin.Comment: 13 pages, 7 figure
A-dependence of nuclear transparency in quasielastic A(e,e'p) at high Q^2
The A-dependence of the quasielastic A(e,e'p) reaction has been studied at
SLAC with H-2, C, Fe, and Au nuclei at momentum transfers Q^2 = 1, 3, 5, and
6.8 (GeV/c)^2. We extract the nuclear transparency T(A,Q^2), a measure of the
average probability that the struck proton escapes from the nucleus A without
interaction. Several calculations predict a significant increase in T with
momentum transfer, a phenomenon known as Color Transparency. No significant
rise within errors is seen for any of the nuclei studied.Comment: 5 pages incl. 2 figures, Caltech preprint OAP-73
Five Dimensional Cosmological Models in General Relativity
A Five dimensional Kaluza-Klein space-time is considered in the presence of a
perfect fluid source with variable G and . An expanding universe is
found by using a relation between the metric potential and an equation of
state. The gravitational constant is found to decrease with time as whereas the variation for the cosmological constant follows as
, and
where is the equation of state parameter and is the scale factor.Comment: 13 pages, 4 figures, accepted in Int. J. Theor. Phy
The , interaction in finite volume and the resonance
In this work the interaction of the coupled channels and
in an SU(4) extrapolation of the chiral unitary theory, where the
resonance appears as dynamically generated from that
interaction, is extended to produce results in finite volume. Energy levels in
the finite box are evaluated and, assuming that they would correspond to
lattice results, the inverse problem of determining the phase shifts in the
infinite volume from the lattice results is solved. We observe that it is
possible to obtain accurate phase shifts and the position of the
resonance, but it requires the explicit consideration of the
two coupled channels. We also observe that some of the energy levels in the box
are attached to the closed channel, such that their use to induce the phase shifts via L\"uscher's formula leads to incorrect results.Comment: 10 pages, 13 figures, accepted for publication in Eur. Phys. J.
The Persistence Length of a Strongly Charged, Rod-like, Polyelectrolyte in the Presence of Salt
The persistence length of a single, intrinsically rigid polyelectrolyte
chain, above the Manning condensation threshold is investigated theoretically
in presence of added salt. Using a loop expansion method, the partition
function is consistently calculated, taking into account corrections to
mean-field theory. Within a mean-field approximation, the well-known results of
Odijk, Skolnick and Fixman are reproduced. Beyond mean-field, it is found that
density correlations between counterions and thermal fluctuations reduce the
stiffness of the chain, indicating an effective attraction between monomers for
highly charged chains and multivalent counterions. This attraction results in a
possible mechanical instability (collapse), alluding to the phenomenon of DNA
condensation. In addition, we find that more counterions condense on slightly
bent conformations of the chain than predicted by the Manning model for the
case of an infinite cylinder. Finally, our results are compared with previous
models and experiments.Comment: 13 pages, 2 ps figure
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