Genesis and petrology of Late Neoproterozoic pegmatites and aplites associated with the Taba metamorphic complex in southern Sinai, Egypt

We present new field, petrographical, mineralogical and geochemical data from late Neoproterozoic pegmatites and aplites in southern Sinai, Egypt, at the northernmost limit of the Arabian-Nubian Shield. The pegmatites cross-cut host rocks in the Taba Metamorphic Complex (TMC) with sharp contacts and are divided into massive and zoned pegmatites. Massive pegmatites are the most common and form veins, dykes and masses of variable dimensions; strikes range mainly from E-W through NW-SE to N-S. Mineralogically, the massive pegmatites are divided into K-feldspar-rich and albite-rich groups. Zoned pegmatites occur as lenses of variable dimensions, featuring a quartz core, an intermediate zone rich in K-feldspars and an outer finer-grained zone rich in albite. All compositions are highly evolved and display geochemical characteristics of post-collisional A-type granites: high SiO2, Na2O+K2O, FeO*/MgO, Ga/Al, Zr, Nb, Ga and Y alongside low CaO, MgO, Ba and Sr. They are rich in Rare Earth Elements (REE) and have extreme negative Eu anomalies (Eu/Eu*= 0.03-0.09). A genetic linkage between the pegmatites, aplites and alkali granite is confirmed by their common mild alkaline affinity and many other geochemical characteristics. These pegmatites and aplites represent the last small fraction of liquid remaining after extensive crystallization of granitic magma, injected along the foliation and into fractures of the host metamorphic rocks. The extensional tectonic regime and shallow depth of emplacement are consistent with a post-collisional environment

Petrological Characteristics of the Bou-azzer Ophiolote, Anti-atlas, Morocco : Nature of Proterozoic Oceanic Lithosphere

金沢大学大学院自然科学研究科Promoting Environmental Pesearch in Pan-Japan Sea Area : Young Researchers\u27 Network, Schedule: March 8-10,2006,Kanazawa Excel Hotel Tokyu, Japan, Organized by: Kanazawa University 21st-Century COE Program, Environmental Monitoring and Prediction of Long- & Short- Term Dynamics of Pan-Japan Sea Area ; IICRC(Ishikawa International Cooperation Research Centre), Sponsors : Japan Sea Research ; UNU-IAS(United Nations University Institute of Advanced Studies)+Ishikawa Prefecture Government ; City of Kanazaw

Late Neoproterozoic layered mafic intrusion of arc-affinity in the Arabian-Nubian Shield : a case study from the Shahira layered mafic intrusion, southern Sinai, Egypt

The Shahira Layered Mafic Intrusion (SLMI), which belongs to the late Neoproterozoic plutonic rocks of the Arabian-Nubian Shield, is the largest layered mafic intrusion in southern Sinai. Field relations indicate that it is younger than the surrounding metamorphic rocks and older han the post-orogenic granites. Based on variation in mineral paragenesis and chemical composition, the SLMI is distinguished into pyroxene-hornblende gabbro, hornblende gabbro and diorite lithologies. The outer zone of the mafic intrusion is characterized by fine-grained rocks (chilled margin gabbroic facies), with typical subophitic and/or microgranular textures. ifferent rock units from the mafic intrusion show gradational boundaries in between. They show some indications of low grade metamorphism, where primary minerals are transformed into secondary ones. Geochemically, the Shahira layered mafic intrusion is characterized by enrichment in LILE relative to HFSE (e.g. Nb, P, Zr, Ti, Y), and LREE relative to HREE [(La/Lu)n= 4.75-8.58], with subalkaline characters. It has geochemical characteristics of pre-collisional arc-type environment. The geochemical signature of the investigated gabbros indicates partial melting of mantle wedge in a volcanic-arc setting, being followed by fractional crystallization and crustal contamination. Fractional crystallization processes played a vital role during emplacement of the Shahira intrusion and evolution of its mafic and intermediate rock units. The initial magma was evolved through crystallization of ornblende which was caused by slight increasing of H2O in the magma after crystallization of iquidus olivine, pyroxene and Ca-rich plagioclase. The gabbroic rocks crystallized at pressures between 4.5 and 6.9kbar (~15-20km depth). Whereas, the diorites yielded the lowest crystallization pressure between 1.0 to 4.4Kbar (<10km depth). Temperature was estimated by several eothermometers, which yielded crystallization temperatures ranging from 835º to 958ºC for the gabbros, and from 665º to 862ºC for the diorites. Field, petrological, geochemical and mineralogical characteristics of the SLMI are akin to the Egyptian layered mafic-ultramafic ntrusions of volcanic-arc setting, not ophiolitic rock

Why uproot Picrorhiza kurrooa, an endangered medicinal herb?

Picrorhiza (Picrorhiza kurrooa Royle ex Benth.) is a small, perennial herb widely used in traditional as well as modern system of medicine. This plant grows in Himalayan region at elevations ranging from 3000 to 5000 m above the sea level and listed as endangered species due to extensive extraction of plant from the nature and lack of organized cultivation. Underground parts (roots and rhizomes) are used for extraction of picrosides, the medicinally important constituents of Picrorhiza. We studied the presence of picrosides in leaf tissue. Reverse phase high-performance liquid chromatography was employed for the detection of picrosides in different tissues, viz. root, rhizome and leaf, as well as during different stages of plant development. Picrosides were present in leaf tissues at all the stages of development. Importantly, the leaf biomass was higher compared to that of roots and rhizomes. Results suggested that the leaf, rather than rhizomes and roots may be used as source of picrosides so that the underground parts left after leaf harvest can give rise to new plants in the subsequent year, thus helping in multiplication of plants year after year and conserving Picrorhiza

Genesis and petrology of Late Neoproterozoic pegmatites and aplites associated with the Taba metamorphic complex in southern Sinai, Egypt

We present new field, petrographical, mineralogical and geochemical data from late Neoproterozoic pegmatites and aplites in southern Sinai, Egypt, at the northernmost limit of the Arabian-Nubian Shield. The pegmatites cross-cut host rocks in the Taba Metamorphic Complex (TMC) with sharp contacts and are divided into massive and zoned pegmatites. Massive pegmatites are the most common and form veins, dykes and masses of variable dimensions; strikes range mainly from E-W through NW-SE to N-S. Mineralogically, the massive pegmatites are divided into K-feldspar-rich and albite-rich groups. Zoned pegmatites occur as lenses of variable dimensions, featuring a quartz core, an intermediate zone rich in K-feldspars and an outer finer-grained zone rich in albite. All compositions are highly evolved and display geochemical characteristics of post-collisional A-type granites: high SiO2, Na2O+K2O, FeO*/MgO, Ga/Al, Zr, Nb, Ga and Y alongside low CaO, MgO, Ba and Sr. They are rich in Rare Earth Elements (REE) and have extreme negative Eu anomalies (Eu/Eu*= 0.03-0.09). A genetic linkage between the pegmatites, aplites and alkali granite is confirmed by their common mild alkaline affinity and many other geochemical characteristics. These pegmatites and aplites represent the last small fraction of liquid remaining after extensive crystallization of granitic magma, injected along the foliation and into fractures of the host metamorphic rocks. The extensional tectonic regime and shallow depth of emplacement are consistent with a post-collisional environment

De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments

Background Picrorhiza kurrooa Royle ex Benth. is an endangered plant species of medicinal importance. The medicinal property is attributed to monoterpenoids picroside I and II, which are modulated by temperature. The transcriptome information of this species is limited with the availability of few hundreds of expressed sequence tags (ESTs) in the public databases. In order to gain insight into temperature mediated molecular changes, high throughput de novo transcriptome sequencing and analyses were carried out at 15°C and 25°C, the temperatures known to modulate picrosides content. Results Using paired-end (PE) Illumina sequencing technology, a total of 20,593,412 and 44,229,272 PE reads were obtained after quality filtering for 15°C and 25°C, respectively. Available (e.g., De-Bruijn/Eulerian graph) and in-house developed bioinformatics tools were used for assembly and annotation of transcriptome. A total of 74,336 assembled transcript sequences were obtained, with an average coverage of 76.6 and average length of 439.5. Guaninecytosine (GC) content was observed to be 44.6%, while the transcriptome exhibited abundance of trinucleotide simple sequence repeat (SSR; 45.63%) markers. Large scale expression profiling through “read per exon kilobase per million (RPKM)”, showed changes in several biological processes and metabolic pathways including cytochrome P450s (CYPs), UDP-glycosyltransferases (UGTs) and those associated with picrosides biosynthesis. RPKM data were validated by reverse transcriptase-polymerase chain reaction using a set of 19 genes, wherein 11 genes behaved in accordance with the two expression methods. Conclusions Study generated transcriptome of P. kurrooa at two different temperatures. Large scale expression profiling through RPKM showed major transcriptome changes at the two temperatures reflecting alterations in major biological processes and metabolic pathways and provided insight of GC content and SSR markers. Analysis also identified putative CYPs and UGTs that could help in discovering the hitherto unknown genes associated with picrosides biosynthesi