The energy budget in Rayleigh-Benard convection

It is shown using three series of Rayleigh number simulations of varying aspect ratio AR and Prandtl number Pr that the normalized dissipation at the wall, while significantly greater than 1, approaches a constant dependent upon AR and Pr. It is also found that the peak velocity, not the mean square velocity, obeys the experimental scaling of Ra^{0.5}. The scaling of the mean square velocity is closer to Ra^{0.46}, which is shown to be consistent with experimental measurements and the numerical results for the scaling of Nu and the temperature if there are strong correlations between the velocity and temperature.Comment: 5 pages, 3 figures, new version 13 Mar, 200

Stripes, Non-Fermi-Liquid Behavior, and High-Tc Superconductivity

The electronic structure of the high-Tc cuprates is studied in terms of "large-U" and "small-U" orbitals. A striped structure and three types of quasiparticles are obtained, polaron-like "stripons" carrying charge, "svivons" carrying spin, and "quasielectrons" carrying both. The anomalous properties are explained, and specifically the behavior of the resistivity, Hall constant, and thermoelectric power. High-temperature superconductivity results from transitions between pair states of quasielectrons and stripons.Comment: 4 page

On the evolution of decoys in plant immune systems

The Guard-Guardee model for plant immunity describes how resistance proteins (guards) in host cells monitor host target proteins (guardees) that are manipulated by pathogen effector proteins. A recently suggested extension of this model includes decoys, which are duplicated copies of guardee proteins, and which have the sole function to attract the effector and, when modified by the effector, trigger the plant immune response. Here we present a proof-of-principle model for the functioning of decoys in plant immunity, quantitatively developing this experimentally-derived concept. Our model links the basic cellular chemistry to the outcomes of pathogen infection and resulting fitness costs for the host. In particular, the model allows identification of conditions under which it is optimal for decoys to act as triggers for the plant immune response, and of conditions under which it is optimal for decoys to act as sinks that bind the pathogen effectors but do not trigger an immune response.Comment: 15 pages, 6 figure

Ordered and periodic chaos of the bounded one dimensinal multibarrier potential

Numerical analysis indicates that there exists an unexpected new ordered chaos for the bounded one-dimensional multibarrier potential. For certain values of the number of barriers, repeated identical forms (periods) of the wavepackets result upon passing through the multibarrier potential.Comment: 16 pages, 9 figures, 1 Table. Some former text removed and other introduce

The effect of weaning diet type on grey mullet (Mugil cephalus) juvenile performance during the trophic shift from carnivory to omnivory

In captive grey mullet (Mugil cephalus) juveniles, the weaning stage overlaps the period where there are changes in the ontogeny of digestive enzymes as the fry transit from carnivory to omnivory. The aim of this study was to evaluate growth, survival, weight distribution and the activity of pancreatic and brush border digestive enzymes when fry are fed a carnivorous, herbivorous or omnivorous weaning diet. Fifteen 17-L aquaria in a flow through system with 40‰, UV treated, temperature (24.5 ± 0.5 °C) controlled seawater were stocked with eighty-five 23 dph grey mullet larvae per aquarium. This allowed the testing of three weaning dietary treatments, differing in their protein and carbohydrate content, in 5 replicate aquaria per treatment from 24 to 53 dph. Diet 1 was the dried macroalgal species Ulva lactuca and was designated as a low protein: high carbohydrate herbivorous diet. Diet 2 was a commercial microencapsulated starter feed designated as a high protein: low carbohydrate carnivorous diet. Diet 3 was a 1:1 ww mixture of diets 1 and diet 2 representing an omnivorous feeding regime. The average final weight of the omnivorous feeding fish was significantly (P .05). The activity levels of brush border alkaline phosphatase and intracellular leucine alanine peptidase were similar in grey mullet fry fed the carnivorous and omnivorous diets, but were higher than those in fish fed the herbivorous diet (P < .05). The intestinal maturation index exhibited the highest and lowest values in mullet fry fed the carnivorous and herbivorous diets, respectively, whereas those from the omnivorous group showed intermediate values (P = .03). This study broadly suggests that aquaculture feeds for juvenile grey mullet should be designed for omnivorous feeding habits.info:eu-repo/semantics/acceptedVersio

PI(5)P regulates autophagosome biogenesis.

Phosphatidylinositol 3-phosphate (PI(3)P), the product of class III PI3K VPS34, recruits specific autophagic effectors, like WIPI2, during the initial steps of autophagosome biogenesis and thereby regulates canonical autophagy. However, mammalian cells can produce autophagosomes through enigmatic noncanonical VPS34-independent pathways. Here we show that PI(5)P can regulate autophagy via PI(3)P effectors and thereby identify a mechanistic explanation for forms of noncanonical autophagy. PI(5)P synthesis by the phosphatidylinositol 5-kinase PIKfyve was required for autophagosome biogenesis, and it increased levels of PI(5)P, stimulated autophagy, and reduced the levels of autophagic substrates. Inactivation of VPS34 impaired recruitment of WIPI2 and DFCP1 to autophagic precursors, reduced ATG5-ATG12 conjugation, and compromised autophagosome formation. However, these phenotypes were rescued by PI(5)P in VPS34-inactivated cells. These findings provide a mechanistic framework for alternative VPS34-independent autophagy-initiating pathways, like glucose starvation, and unravel a cytoplasmic function for PI(5)P, which previously has been linked predominantly to nuclear roles.We are grateful for funding from a Wellcome Trust Principal Research Fellowship (095317/Z/11/Z to D.C.R.), a Wellcome Trust Strategic Award (100140/Z/ 12/Z), the NIHR Biomedical Research Centre in Dementia at Addenbrooke’s Hospital, an MRC Confidence in Concepts grant (D.C.R.), and a FEBS Long- Term Fellowship (A.A.).This article was originally published in Molecular Cell (M Vicinanza, VI Korolchuk, A Ashkenazi, C Puri, FM Menzies, JH Clarke, DC Rubinsztein, Molecular Cell 2015, 57, 219-234

Electronic Collective Modes and Superconductivity in Layered Conductors

A distinctive feature of layered conductors is the presence of low-energy electronic collective modes of the conduction electrons. This affects the dynamic screening properties of the Coulomb interaction in a layered material. We study the consequences of the existence of these collective modes for superconductivity. General equations for the superconducting order parameter are derived within the strong-coupling phonon-plasmon scheme that account for the screened Coulomb interaction. Specifically, we calculate the superconducting critical temperature Tc taking into account the full temperature, frequency and wave-vector dependence of the dielectric function. We show that low-energy plasmons may contribute constructively to superconductivity. Three classes of layered superconductors are discussed within our model: metal-intercalated halide nitrides, layered organic materials and high-Tc oxides. In particular, we demonstrate that the plasmon contribution (electronic mechanism) is dominant in the first class of layered materials. The theory shows that the description of so-called ``quasi-two-dimensional superconductors'' cannot be reduced to a purely 2D model, as commonly assumed. While the transport properties are strongly anisotropic, it remains essential to take into account the screened interlayer Coulomb interaction to describe the superconducting state of layered materials.Comment: Final version (minor changes) 14 pages, 6 figure

Measurement of polarization-transfer to bound protons in carbon and its virtuality dependence

We measured the ratio $P_{x}/P_{z}$ of the transverse to longitudinal components of polarization transferred from electrons to bound protons in $^{12}\mathrm{C}$ by the $^{12}\mathrm{C}(\vec{e},e'\vec{p})$ process at the Mainz Microtron (MAMI). We observed consistent deviations from unity of this ratio normalized to the free-proton ratio, $(P_{x}/P_{z})_{^{12}\mathrm{C}}/(P_{x}/P_{z})_{^{1}\mathrm{H}}$, for both $s$- and $p$-shell knocked out protons, even though they are embedded in averaged local densities that differ by about a factor of two. The dependence of the double ratio on proton virtuality is similar to the one for knocked out protons from $^{2}\mathrm{H}$ and $^{4}\mathrm{He}$, suggesting a universal behavior. It further implies no dependence on average local nuclear density

The key neuroendocrine regulators of the onset of puberty in the Atlantic bluefin tuna (Thunnus thynnus)

Recently, significant progress on spawning induction in captive bluefin tuna (BFT, Thunnus thynnus), has been achieved providing the basis for the species' domestication. To further promote the development of a self- sustained BFT aquaculture, we investigated first sexual maturity in BFT reared from an immature stage in captivity. Accordingly, our major objectives were to evaluate: (i) maturational status of the brain-pituitary-gonadal (BPG) axis, and (ii) responsiveness of the BPG to exogenous hormones. Special emphasis was given to characterize the gonadotropins follicle stimulating hormone (FSH) and luteinizing hormone (LH) that act as central regulators of gonadal development and gamete maturation. The growth parameters recorded for the captive BFT juveniles are consistent with the length-weight relationship established for wild Mediterranean BFT stocks. The histological analyses of the gonads indicate advanced sexual maturation in BFT males compared to females, yet it is not yet clear whether this phenomenon typifies wild stocks or is induced due to the culture conditions. The hormone measurements show expression and accumulation of both gonadotropins in the pituitaries of immature and mature BFT. The pituitary LH content increased concomitantly with the age of the fish, exhibiting sex dimorphic patterns (i.e. 3-fold higher levels in females) in adult but not in juvenile BFT. The pituitary FSH levels, however, were elevated in 2Y immature males and in fully mature adults. Comparable to mammals, the intra-pituitary FSH/LH ratio was found to be higher (>1) in sexually immature than in maturing or pubertal BFT. Nevertheless, in the 3Y BFT females, which were all immature, the onset of puberty appears to require some other prerequisites, such as a rise in the LH storage above a minimal threshold. Our in vitro trials further demonstrated the capacity of rFSH and to a lesser extent that of rLH to stimulate cell proliferation in the immature ovarian and testicular fragments. Both rFSH and rLH have failed to stimulate steroidogenesis, yet pre-treatment with KiSS containing EVAc implants appeared to potentiate FSH-stimulated steroidogenesis in the immature testes. On the other hand, the expression levels of both the GtH-R and IGF I genes in the testicular fragments, derived from BFT juveniles and further exposed to the rLH treatment, showed dose-dependent pattern. Future studies testing the effects of captivity and hormone-based treatments on precocious maturity at relatively small body size are expected to facilitate the handling in confined environments, and to greatly improve the cost-efficiency of BFT farming.Postprin

Crustal strain in central Greece from repeated GPS measurements in the interval 1989-1997

A 66-station GPS network spanning central Greece, first observed in 1989, has been occupied fully on three occasions: June 1989, October 1991 and May 1993. Subsets of this network bounding the Gulf of Korinthos have also been occupied in June 1995, October 1995, May 1996 and September/October 1997. The first three occupations were processed using a fiducial GPS methodology, whereas later surveys were processed using CODE precise orbits. Combination of data from different surveys to yield smooth site velocities requires global network translations at each epoch to compensate for errors in the realization of the reference frame. This method provides a posteriori estimates of the relative coordinate errors and reference frame noise. Only one earthquake, the 1995 June 15 Egion event, has caused significant local coseismic displacement, and its effects on the interseismic velocity field are removed using an elastic dislocation model. We constrain the orientation of the 100 yr triangulation—GPS velocity estimates of Davies et al. (1997) using 14 sites common to the two networks. The goodness of fit of this transformation indicates that the short-term and 100 yr geodetic estimates of deformation are highly compatible. We infer that short-term geodetic studies are capable of determining longer-term deformation rates provided that transient, local effects can be modelled. From the combined velocity field, we estimate principal strains and rigid-body rotation rates at points on a regular grid using data from neighbouring sites. Strain rates are high within the Gulf of Korinthos and much lower elsewhere. The extension rate across the Gulf of Korinthos increases from east to west. Comparison of the extension rate with historical and recent rates of seismic release of strain reveals significant medium-term seismic hazard in the western Gulf of Korinthos, and may also indicate long-term aseismic strai