Calibration of star formation rate tracers for short- and long-lived star formation episodes

To derive the history of star formation in the Universe a set of calibrated star formation rate tracers at different wavelengths is required. The calibration has to consistently take into account the effects of extinction, star formation regime (short or long-lived) and evolutionary state to avoid biases at different redshift ranges. We use evolutionary synthesis models optimized for intense episodes of star formation in order to compute a consistent calibration of the most usual star formation rate tracers at different energy ranges, from X-ray to radio luminosities. Nearly-instantaneous and continuous star formation regimes, and the effect of interstellar extinction are considered, as well as the effect of metallicity on the calibration of the different estimators. A consistent calibration of a complete set of star formation rate tracers is presented, computed for the most usual star-forming regions conditions: evolutionary state, star formation regime, interstellar extinction and initial mass function. We discuss the validity of the different tracers in different star formation scenarios and compare our predictions with previous calibrations of general use. Nearly-instantaneous and continuous star formation regimes must be distinguished. While the Star Formation Strength (\msun) should be used for the former, the more common Star Formation Rate (\msun yr$^{-1}$) is only valid for episodes forming stars at a constant rate during extended periods for time. Moreover, even for the latter, the evolutionary state should be taken into account, since most SFR tracers stabilize only after 100 Myr of evolution.Comment: Accepted for publication in A&A, webtool in http://www.laeff.cab.inta-csic.es/research/sfr/, 19 pages, 10 figures, 14 tables. New version including language style revisio

Activity Identification and Local Linear Convergence of Douglas--Rachford/ADMM under Partial Smoothness

Convex optimization has become ubiquitous in most quantitative disciplines of science, including variational image processing. Proximal splitting algorithms are becoming popular to solve such structured convex optimization problems. Within this class of algorithms, Douglas--Rachford (DR) and alternating direction method of multipliers (ADMM) are designed to minimize the sum of two proper lower semi-continuous convex functions whose proximity operators are easy to compute. The goal of this work is to understand the local convergence behaviour of DR (resp. ADMM) when the involved functions (resp. their Legendre-Fenchel conjugates) are moreover partly smooth. More precisely, when both of the two functions (resp. their conjugates) are partly smooth relative to their respective manifolds, we show that DR (resp. ADMM) identifies these manifolds in finite time. Moreover, when these manifolds are affine or linear, we prove that DR/ADMM is locally linearly convergent. When $J$ and $G$ are locally polyhedral, we show that the optimal convergence radius is given in terms of the cosine of the Friedrichs angle between the tangent spaces of the identified manifolds. This is illustrated by several concrete examples and supported by numerical experiments.Comment: 17 pages, 1 figure, published in the proceedings of the Fifth International Conference on Scale Space and Variational Methods in Computer Visio

Improving the nutritive value of rice seeds: elevation of cysteine and methionine contents in rice plants by ectopic expression of a bacterial serine acetyltransferase

With the aim of increasing the cysteine level in rice (Oryza sativa L.) and thus improving its nutritional quality, transgenic rice plants were generated expressing an Escherichia coli serine acetyltransferase isoform (EcSAT), the enzyme synthesizing O-acetylserine, the precursor of cysteine. The gene was fused to the transit peptide of the Arabidopsis Rubisco and driven by a ubiquitin promoter to target the enzyme to plastids. Twenty-two transgenic plants were examined for transgene protein expression, and five lines with a high expression level and enzymatic activity, respectively, were selected for further analysis. In these lines, the contents of cysteine and glutathione increased 2.4-fold and 2-fold, respectively. More important is the increase in free methionine and methionine incorporated into the water-soluble protein fraction in seeds. Free methionine increased in leaves up to 2.7-fold, in seeds up to 1.4-fold, and bound to seed proteins up to 4.8-fold, respectively, while the bound methionine level remained constant or even decreased in leaves. Notably, the transgenic lines exhibited higher isoleucine, leucine, and valine contents (each up to 2-fold depending on tissue, free, or bound), indicating a potential conversion of methionine via methionine -lyase to isoleucine. As the transgenic rice plants overexpressing EcSAT had significantly higher levels of both soluble and protein-bound methionine, isoleucine, cysteine, and glutathione in rice they may represent a model and target system for improving the nutritional quality of cereal crops

Modelling light scattering by absorbing smooth and slightly rough facetted particles

A method for approximating light scattering properties of strongly absorbing facetted particles which are large compared to the wavelength is presented. It consists in adding the approximated external diffraction and reflection far fields and is demonstrated for a smooth hexagonal prism. This computationally fast method is extended towards prisms with slightly rough surfaces by introducing a surface scaling factor in order to account for edge effects on subfacets forming the rough surface. These effects become more pronounced with decreasing subfacet dimension to wavelength ratio. Azimuthally resolved light scattering patterns, phase functions and degree of linear polarisation obtained by this method and by the Discrete Dipole Approximation are compared for hexagonal prisms with smooth and slightly rough surfaces, respectively.Peer reviewedSubmitted Versio

Multiwavelength analysis of the Lyman alpha emitting galaxy Haro 2: relation between the diffuse Lyman alpha and soft X-ray emissions

In order to use Lyman alpha (Lya) emission as star formation tracer in cosmological studies, we must understand how the resonant scattering affects the escape fraction of the Lya photons. Thus, high spatial resolution multiwavelength studies of nearby Lya emitters, like Haro 2, are highly needed. For that purpose, we have used Chandra X-ray and HST (UV, optical and NIR) images of Haro 2, and STIS and ground-based spectral images along its major and minor axes, to characterize the Lya emission and the properties of the stellar population. The UV, Ha (Halpha) and FIR luminosities of the Haro 2 nuclear starburst are reproduced using evolutionary synthesis models assuming a young stellar population with ages ~3.5-5.0 Myr, affected by differential interstellar extinctions. The observed X-ray emission is attributed to gas heated by the mechanical energy released by the starburst (soft component) and a Ultra-Luminous X-ray source candidate (hard). Both compact and diffuse Lya components are observed. Whereas Lya is spatially decoupled from Balmer lines emission, Balmer decrement and UV continuum, the diffuse Lya component is spatially correlated with the diffuse soft X-ray emission. Moreover, unlike the compact one, diffuse Lya shows luminosities larger than predicted from Ha, assuming case B recombination and dust extinction as derived from Ha/Hbeta. We propose that, whereas the compact Lya emission is associated to the massive stellar clusters and is affected by outflows and dust extinction, the diffuse Lya originates in gas ionized by the hot plasma responsible for the soft X-ray radiation, as suggested by their spatial correlation and by the measured L(Ha)/LsoftX ratios. Calibration of Lya as star formation rate tracer should therefore include both effects (destruction vs. enhancement) to avoid biases in the study of galaxies at cosmological distances.Comment: Accepted for publication in A&A, 18 pages, 8 figures, 9 tables. If problems with quality of images, see http://www.cab.inta-csic.es/users/otih/haro2-v63.clean.pd

Physical properties and evolutionary state of the Lyman alpha emitting starburst galaxy IRAS 08339+6517

Though Lyman alpha emission (Lya) is one of the most used tracers of massive star formation at high redshift, a correct understanding of radiation transfer effects by neutral gas is required to properly quantify the star formation rate along the history of the Universe. We are embarked in a program to study the properties of the Lya emission (spectral profile, spatial distribution, relation to Balmer lines intensity,...) in several local starburst galaxies. We present here the results obtained for IRAS 08339+6517. Using evolutionary population synthesis models, we have characterized the properties of the starburst (UV continuum, Halpha, total infrared and X-ray emissions, etc.), which transformed 1.4e+8 Mo of gas into stars around 5-6 Myr ago. In addition to the central compact emission blob, we have identified a diffuse Lya emission component smoothly distributed over the whole central area of IRAS 08339+6517. This diffuse emission is spatially decoupled from the UV continuum, the Halpha emission or the Halpha/Hbeta ratio. Both locally and globally, the Lya/Halpha ratio is lower than the Case B predictions, even after reddening correction, with an overall Lya escape fraction of only 4%. We conclude that in IRAS 08339+6517 the resonant scattering of Lya photons by an outflowing shell of neutral gas causes their highly-efficient destruction by dust, which explains the low Lya escape fraction measured. These results stress again the importance of a proper correction of scattering and transfer effects when using Lya to derive the star formation rate in high-redshift galaxies.Comment: Accepted for publication in A&A, 17 pages, 13 figures, 8 tables. If problems with quality of images, see https://cloud.cab.inta-csic.es/public.php?service=files&file=%2Fotih%2Ffiles%2Foti_mas%2Firas%2Firas-v53.ack_referee.pd

Incidence of rough and irregular atmospheric ice particles from Small Ice Detector 3 measurements

NERC, NE/E011225/1 © Author(s) 2013. This work is distributed under the Creative Commons Attribution 3.0 LicenseThe knowledge of properties of ice crystals such as size, shape, concavity and roughness is critical in the context of radiative properties of ice and mixed phase clouds. Limitations of current cloud probes to measure these properties can be circumvented by acquiring two-dimensional light scattering patterns instead of particle images. Such patterns were obtained in situ for the first time using the Small Ice Detector 3 (SID-3) probe during several flights in a variety of mid-latitude mixed phase and cirrus clouds. The patterns are analyzed using several measures of pattern texture, selected to reveal the magnitude of particle roughness or complexity. The retrieved roughness is compared to values obtained from a range of well-characterized test particles in the laboratory. It is found that typical in situ roughness corresponds to that found in the rougher subset of the test particles, and sometimes even extends beyond the most extreme values found in the laboratory. In this study we do not differentiate between small-scale, fine surface roughness and large-scale crystal complexity. Instead, we argue that both can have similar manifestations in terms of light scattering properties and also similar causes. Overall, the in situ data is consistent with ice particles with highly irregular or rough surfaces being dominant. Similar magnitudes of roughness were found in growth and sublimation zones of cirrus. The roughness was found to be negatively correlated with the halo ratio, but not with other thermodynamic or microphysical properties found in situ. Slightly higher roughness was observed in cirrus forming in clean oceanic airmasses than in a continental, polluted one. Overall, the roughness and complexity is expected to lead to increased shortwave cloud reflectivity, in comparison with cirrus composed of more regular, smooth ice crystal shapes. These findings put into question suggestions that climate could be modified through aerosol seeding to reduce cirrus cover and optical depth, as the seeding may result in decreased shortwave reflectivity.Peer reviewe

Model-based Aeroservoelastic Design and Load Alleviation of Large Wind Turbine Blades

This paper presents an aeroservoelastic modeling approach for dynamic load alleviation in large wind turbines with trailing-edge aerodynamic surfaces. The tower, potentially on a moving base, and the rotating blades are modeled using geometrically non-linear composite beams, which are linearized around reference conditions with arbitrarily-large structural displacements. Time-domain aerodynamics are given by a linearized 3-D unsteady vortexlattice method and the resulting dynamic aeroelastic model is written in a state-space formulation suitable for model reductions and control synthesis. A linear model of a single blade is used to design a Linear-Quadratic-Gaussian regulator on its root-bending moments, which is finally shown to provide load reductions of about 20% in closed-loop on the full wind turbine non-linear aeroelastic model