Monte Carlo Study of the Inflation-Deflation Transition in a Fluid Membrane

We study the conformation and scaling properties of a self-avoiding fluid membrane, subject to an osmotic pressure $p$, by means of Monte Carlo simulations. Using finite size scaling methods in combination with a histogram reweighting techniques we find that the surface undergoes an abrupt conformational transition at a critical pressure $p^\ast$, from low pressure deflated configurations with a branched polymer characteristics to a high pressure inflated phase, in agreement with previous findings \cite{gompper,baum}. The transition pressure $p^{\ast}$ scales with the system size as $p^\ast \propto N^{-\alpha}$, with $\alpha = 0.69 \pm 0.01$. Below $p^\ast$ the enclosed volume scales as $V \propto N$, in accordance with the self-avoiding branched polymer structure, and for $p\searrow p^{\ast}$ our data are consistent with the finite size scaling form $V \propto N^{\beta_{+}}$, where $\beta_{+} = 1.43 \pm 0.04$. Also the finite size scaling behavior of the radii of gyration and the compressibility moduli are obtained. Some of the observed exponents and the mechanism behind the conformational collapse are interpreted in terms of a Flory theory.Comment: 20 pages + postscript-file, Latex + Postscript, IFA Report No. 94/1

Effects of steam and vacuum administration during decontamination on essential oil content in herbal medicines

Saturated steam decontamination is an application for elimination of microorganisms from the surface of different materials. This technique has been optimized for the treatment of dried spices or pharmaceuticals, which could have been contaminated with microorganisms during cultivation, processing, storage or transport. The described saturated steam decontamination is based on the Lemgo process. This method does not kill microorganisms, but removes them physically from the surface.Our investigation focused on measuring the effects of steam temperatures at 120 °C and 100 °C, respectively, for 20 s with a subsequent fl ash vacuum of 20 s. Applications of fl ash vacuum as well as saturated steam heated to 120 °C were also tested separately. The impact of these parameters on the essential oil content and on the surface of different medicinal plants such as marjoram, oregano, fennel and eucalyptus was analysed using gas chromatography and scanning electron microscopy.Especially in herbal drugs with glandular trichomes such as marjoram and oregano severe surface destruction was visible accompanied by high losses of essential oil from 93 % in marjoram tissue to 59 % in oregano tissue. For fennel and eucalyptus that possess protected essential oil storage cells only minor or no reduction of volatiles has been observed during exposure to saturated steam. The experiments show clearly a positive correlation between stability of essential oil cavities and essential oil content preservation

Development of Ground-testable Phase Fresnel Lenses in Silicon

Diffractive/refractive optics, such as Phase Fresnel Lenses (PFL's), offer the potential to achieve excellent imaging performance in the x-ray and gamma-ray photon regimes. In principle, the angular resolution obtained with these devices can be diffraction limited. Furthermore, improvements in signal sensitivity can be achieved as virtually the entire flux incident on a lens can be concentrated onto a small detector area. In order to verify experimentally the imaging performance, we have fabricated PFL's in silicon using gray-scale lithography to produce the required Fresnel profile. These devices are to be evaluated in the recently constructed 600-meter x-ray interferometry testbed at NASA/GSFC. Profile measurements of the Fresnel structures in fabricated PFL's have been performed and have been used to obtain initial characterization of the expected PFL imaging efficiencies.Comment: Presented at GammaWave05: "Focusing Telescopes in Nuclear Astrophysics", Bonifacio, Corsica, September 2005, to be published in Experimental Astronomy, 8 pages, 3 figure

The dual specificity phosphatase 2 gene is hypermethylated in human cancer and regulated by epigenetic mechanisms

Background: Dual specificity phosphatases are a class of tumor-associated proteins involved in the negative regulation of the MAP kinase pathway. Downregulation of the dual specificity phosphatase 2 (DUSP2) has been reported in cancer. Epigenetic silencing of tumor suppressor genes by abnormal promoter methylation is a frequent mechanism in oncogenesis. It has been shown that the epigenetic factor CTCF is involved in the regulation of tumor suppressor genes. Methods: We analyzed the promoter hypermethylation of DUSP2 in human cancer, including primary Merkel cell carcinoma by bisulfite restriction analysis and pyrosequencing. Moreover we analyzed the impact of a DNA methyltransferase inhibitor (5-Aza-dC) and CTCF on the epigenetic regulation of DUSP2 by qRT-PCR, promoter assay, chromatin immuno-precipitation and methylation analysis. Results: Here we report a significant tumor-specific hypermethylation of DUSP2 in primary Merkel cell carcinoma (p=0.05). An increase in methylation of DUSP2 was also found in 17 out of 24 (71 %) cancer cell lines, including skin and lung cancer. Treatment of cancer cells with 5-Aza-dC induced DUSP2 expression by its promoter demethylation, Additionally we observed that CTCF induces DUSP2 expression in cell lines that exhibit silencing of DUSP2. This reactivation was accompanied by increased CTCF binding and demethylation of the DUSP2 promoter. Conclusions: Our data show that aberrant epigenetic inactivation of DUSP2 occurs in carcinogenesis and that CTCF is involved in the epigenetic regulation of DUSP2 expression

FPGA basierte, konfigurierbare OFDM Sender-Plattform für die Positionsbestimmung mittels TDoA

Für die Evaluierung von Algorithmen zur Positionsbestimmung nach dem Time Difference of Arrival – Verfahren wird eine frei konfigurierbare OFDM Sender-Plattform benötigt. Da die Berechnung in Echtzeit erfolgen soll, ist eine Implementierung in rekonfigurierbarer Hardware (FPGA) erforderlich. Das Manuskript gibt sowohl einen Überblick über die Hintergründe und die Architektur des Sendesystems, als auch einen tieferen Einblick in verschiedene Lösungsdetails

Frequent epigenetic inactivation of RASSF2 in thyroid cancer and functional consequences

<p>Abstract</p> <p>Background</p> <p>The Ras association domain family (RASSF) encodes for distinct tumor suppressors and several members are frequently silenced in human cancer. In our study, we analyzed the role of RASSF2, RASSF3, RASSF4, RASSF5A, RASSF5C and RASSF6 and the effectors MST1, MST2 and WW45 in thyroid carcinogenesis.</p> <p>Results</p> <p>Frequent methylation of the <it>RASSF2 </it>and <it>RASSF5A </it>CpG island promoters in thyroid tumors was observed. <it>RASSF2 </it>was methylated in 88% of thyroid cancer cell lines and in 63% of primary thyroid carcinomas. <it>RASSF2 </it>methylation was significantly increased in primary thyroid carcinoma compared to normal thyroid, goiter and follicular adenoma (0%, 17% and 0%, respectively; p < 0.05). Patients which were older than 60 years were significantly hypermethylated for <it>RASSF2 </it>in their primary thyroid tumors compared to those younger than 40 years (90% vs. 38%; p < 0.05). <it>RASSF2 </it>promoter hypermethylation correlated with its reduced expression and treatment with a DNA methylation inhibitor reactivated <it>RASSF2 </it>transcription. Over-expression of RASSF2 reduced colony formation of thyroid cancer cells. Functionally our data show that RASSF2 interacts with the proapoptotic kinases MST1 and MST2 and induces apoptosis in thyroid cancer cell lines. Deletion of the MST interaction domain of RASSF2 reduced apoptosis significantly (p < 0.05).</p> <p>Conclusion</p> <p>These results suggest that <it>RASSF2 </it>encodes a novel epigenetically inactivated candidate tumor suppressor gene in thyroid carcinogenesis.</p

The SARAH Domain of RASSF1A and Its Tumor Suppressor Function

The Ras association domain family 1A (RASSF1A) tumor suppressor encodes a Sav-RASSF-Hpo domain (SARAH), which is an interaction domain characterized by hWW45 (dSAV) and MST1/2 (dHpo). In our study, the interaction between RASSF1A and RASSF1C with MST1 and MST2 was demonstrated and it was shown that this interaction depends on the SARAH domain. SARAH domain-deleted RASSF1A had a similar growth-reducing effect as full-length RASSF1A and inhibited anchorage independent growth of the lung cancer cell lines A549 significantly. In cancer cells expressing the SARAH deleted form of RASSF1A, reduced mitotic rates (P = 0.001) with abnormal metaphases (P < 0.001) were observed and a significantly increased rate of apoptosis was found (P = 0.006) compared to full-length RASSF1A. Although the association with microtubules and their stabilization was unaffected, mitotic spindle formation was altered by deletion of the SARAH domain of RASSF1A. In summary, our results suggest that the SARAH domain plays an important role in regulating the function of RASSF1A

RASSF10 Promoter Hypermethylation Is Frequent in Malignant Melanoma of the Skin but Uncommon in Nevus Cell Nevi

The Ras association domain family (RASSF) consists of several tumor suppressor genes, which are frequently silenced in human cancers. We analyzed the epigenetic inactivation of RASSF2 and RASSF10 in malignant melanoma (MM) of the skin, including 5 MM cell lines, 28 primary MM, 33 metastases of MM, 47 nevus cell nevi (NCN), and 22 control tissues. The RASSF2 promoter was epigenetically downregulated in two MM cell lines only, but not in any of the investigated tumor samples. In contrast, hypermethylation of the RASSF10 promoter was found in all investigated cell lines, 19/28 (68%) of the primary MM and 30/33 (91%) of the MM metastases, 2/18 (11%) of the dysplastic NCN, and 0/29 (0%) of the non-dysplastic NCN (difference between MM and all nevi, P<0.001). RASSF10 promoter hypermethylation correlated with a reduced RASSF10 mRNA expression in 3/4 MM cell lines, and treatment with a DNA methylation inhibitor reactivated RASSF10 transcription. Furthermore, immunohistological RASSF10 expression corresponds negatively to its promoter methylation state. In summary, RASSF10 proved to be a characteristically epigenetically silenced tumor suppressor in melanomagenesis, and analysis of RASSF10 methylation status represents a new candidate tool to assist in discrimination between MM and NCN

The Dynamic Exponent of the Two-Dimensional Ising Model and Monte Carlo Computation of the Sub-Dominant Eigenvalue of the Stochastic Matrix

We introduce a novel variance-reducing Monte Carlo algorithm for accurate determination of autocorrelation times. We apply this method to two-dimensional Ising systems with sizes up to $15 \times 15$, using single-spin flip dynamics, random site selection and transition probabilities according to the heat-bath method. From a finite-size scaling analysis of these autocorrelation times, the dynamical critical exponent $z$ is determined as $z=2.1665$ (12)