346 research outputs found
Methods for Facilitating the Blind Landing of Airplanes
Since the introduction of blind flying, the accomplishment of blind landing on prepared fields has become one of the most pressing problems, and many attempts are being made to solve it. The methods employed, in so far as they have been published, are summarized in this report
HOMELESS HIGH SCHOOL STUDENTS IN AMERICA: WHO COUNTS?
After interviewing homeless high school students, the research team in a Colorado school district discovered that many students had not revealed their true living conditions (homelessness) to anyone in the school district. This research team developed an anonymous survey written around the homeless categories identified in the McKinney-Vento federal legislation. Results revealed students who identified as homeless for a portion of their high school years in numbers and percentages alarmingly higher than the district had on file. In fact, over 25 times as many homeless students were identified by this process than by the previously-used district system for identifying homelessness. An equally alarming finding is that very few students identified their homeless status to a teacher, counselor, or school administrator. This article identifies statistical patterns to predict homelessness and provides recommendations for administrative practices
Finding the Right Fit: A Comparison of Process Assumptions Underlying Popular Drift-Diffusion Models
Recent research makes increasing use of eye-tracking methodologies to generate and test process models. Overall, such research suggests that attention, generally indexed by fixations (gaze duration), plays a critical role in the construction of preference, although the methods employed to support this supposition differ substantially. In two studies we empirically test prototypical versions of prominent processing assumptions against one another and several base models. We find that general evidence accumulation processes provide a good fit to the data. An accumulation process that assumes leakage and temporal variability in evidence weighting (i.e. a primacy effect) fits the aggregate data, both in terms of choices and decision times, and does so across varying types of choices (e.g., charitable giving and hedonic consumption) and numbers of options well. However, when comparing models on the level of the individual, for a majority of participants simpler models capture choice data better. The theoretical and practical implications of these findings are discussed
Phylogeny-aware identification and correction of taxonomically mislabeled sequences
Molecular sequences in public databases are mostly annotated by the submitting authors without further validation. This procedure can generate erroneous taxonomic sequence labels. Mislabeled sequences are hard to identify, and they can induce downstream errors because new sequences are typically annotated using existing ones. Furthermore, taxonomic mislabelings in reference sequence databases can bias metagenetic studies which rely on the taxonomy. Despite significant efforts to improve the quality of taxonomic annotations, the curation rate is low because of the labor-intensive manual curation process. Here, we present SATIVA, a phylogeny-aware method to automatically identify taxonomically mislabeled sequences (‘mislabels’) using statistical models of evolution. We use the Evolutionary Placement Algorithm (EPA) to detect and score sequences whose taxonomic annotation is not supported by the underlying phylogenetic signal, and automatically propose a corrected taxonomic classification for those. Using simulated data, we show that our method attains high accuracy for identification (96.9% sensitivity/91.7% precision) as well as correction (94.9% sensitivity/89.9% precision) of mislabels. Furthermore, an analysis of four widely used microbial 16S reference databases (Greengenes, LTP, RDP and SILVA) indicates that they currently contain between 0.2% and 2.5% mislabels. Finally, we use SATIVA to perform an in-depth evaluation of alternative taxonomies for Cyanobacteria. SATIVA is freely available at https://github.com/amkozlov/sativa
ARHGEF7 (BETA-PIX) Acts as Guanine Nucleotide Exchange Factor for Leucine-Rich Repeat Kinase 2
Background: Mutations within the leucine-rich repeat kinase 2 (LRRK2) gene are a common cause of familial and sporadic Parkinson’s disease. The multidomain protein LRRK2 exhibits overall low GTPase and kinase activity in vitro. Methodology/Principal Findings: Here, we show that the rho guanine nucleotide exchange factor ARHGEF7 and the small GTPase CDC42 are interacting with LRRK2 in vitro and in vivo. GTPase activity of full-length LRRK2 increases in the presence of recombinant ARHGEF7. Interestingly, LRRK2 phosphorylates ARHGEF7 in vitro at previously unknown phosphorylation sites. We provide evidence that ARHGEF7 might act as a guanine nucleotide exchange factor for LRRK2 and that R1441C mutant LRRK2 with reduced GTP hydrolysis activity also shows reduced binding to ARHGEF7. Conclusions/Significance: Downstream effects of phosphorylation of ARHGEF7 through LRRK2 could be (i) a feedback control mechanism for LRRK2 activity as well as (ii) an impact of LRRK2 on actin cytoskeleton regulation. A newly identified familial mutation N1437S, localized within the GTPase domain of LRRK2, further underlines the importance of the GTPas
Application of realistic effective interactions to the structure of the Zr isotopes
We calculate the low-lying spectra of the zirconium isotopes Z=40 with
neutron numbers from N=52 to N=60 using the 1p1/20g9/2 proton and
2s1d0g7/20h11/2 neutron sub-shells to define the model space. Effective
proton-proton, neutron--neutron and proton-neutron interactions have been
derived using 88Sr as closed core and employing perturbative many-body
techniques. The starting point is the nucleon-nucleon potential derived from
modern meson exchange models. The comprehensive shell-model calculation
performed in this work provides a qualitative reproduction of essential
properties such as the sub-shell closures in 96Zr and 98Zr.Comment: To appear in Phys Rev C, june 2000, 8 figs, Revtex latex styl
New calculations of the PNC Matrix Element for the 0 doublet in N
A new calculation of the predominantly isoscalar PNC matrix element between
the (E 8.7 MeV) states in N has
been carried out in a (0+1+2+3+4) model space with the
Warburton-Brown interaction. The magnitude of the PNC matrix element of 0.22 to
0.34 eV obtained with the DDH PNC interaction is substantially suppressed
compared with previous calculations in smaller model spaces but shows agreement
with the preliminary Seattle experimental data. The calculated sign is opposite
to that obtained experimentally, and the implications of this are discussed.Comment: REVTEX, 28 page
Local barrier dysfunction identified by confocal laser endomicroscopy predicts relapse in inflammatory bowel disease
Loss of intestinal barrier function plays an important role in the pathogenesis of inflammatory bowel disease (IBD). Shedding of intestinal epithelial cells is a potential cause of barrier loss during inflammation. The objectives of the study were (1) to determine whether cell shedding and barrier loss in humans can be detected by confocal endomicroscopy and (2) whether these parameters predict relapse of IBD
Signal Transduction Protein Array Analysis Links LRRK2 to Ste20 Kinases and PKC Zeta That Modulate Neuronal Plasticity
substrate phosphorylation..Ste20 kinases and PKC zeta contribute to neuronal Tau phosphorylation, neurite outgrowth and synaptic plasticity under physiological conditions. Our data suggest that these kinases may also be involved in synaptic dysfunction and neurite fragmentation in transgenic mice and in human PD patients carrying toxic gain-of-function LRRK2 mutations
Toward a Consistent Description of the PNC Experiments in A=18-21 Nuclei
The experimental PNC results in F, F, Ne and the current
theoretical analysis show a discrepancy . If one interprets the small limit of
the experimentally extracted PNC matrix element for Ne as a destructive
interference between the isoscalar and the isovector contribution, then it is
difficult to understand why the isovector contribution in F is so small
while the isoscalar + isovector contribution in F is relatively large.
In order to understand the origin of this discrepancy a comparison of the
calculated PNC matrix elements was performed. It is shown that the F and
Ne matrix elements contain important contributions from 3
and 4 configuration and that the (0+1) calculations
give distorted results.Comment: REVTEX, 16 pages, 1 postscriptum figure uuencoded and appende
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