3,432 research outputs found
Distinct functions of S. pombe Rec12 (Spo11) protein and Rec12-dependent crossover recombination (chiasmata) in meiosis I; and a requirement for Rec12 in meiosis II
BACKGROUND: In most organisms proper reductional chromosome segregation during meiosis I is strongly correlated with the presence of crossover recombination structures (chiasmata); recombination deficient mutants lack crossovers and suffer meiosis I nondisjunction. We report that these functions are separable in the fission yeast Schizosaccharomyces pombe. RESULTS: Intron mapping and expression studies confirmed that Rec12 is a member of the Spo11/Top6A topoisomerase family required for the formation of meiotic dsDNA breaks and recombination. rec12-117, rec12-D15 (null), and rec12-Y98F (active site) mutants lacked most crossover recombination and chromosomes segregated abnormally to generate aneuploid meiotic products. Since S. pombe contains only three chromosome pairs, many of those aneuploid products were viable. The types of aberrant chromosome segregation were inferred from the inheritance patterns of centromere linked markers in diploid meiotic products. The rec12-117 and rec12-D15 mutants manifest segregation errors during both meiosis I and meiosis II. Remarkably, the rec12-Y98F (active site) mutant exhibited essentially normal meiosis I segregation patterns, but still exhibited meiosis II segregation errors. CONCLUSIONS: Rec12 is a 345 amino acid protein required for most crossover recombination and for chiasmatic segregation of chromosomes during meiosis I. Rec12 also participates in a backup distributive (achiasmatic) system of chromosome segregation during meiosis I. In addition, catalytically-active Rec12 mediates some signal that is required for faithful equational segregation of chromosomes during meiosis II
Effect of somatic mutation on DNA binding properties of anti-DNA autoantibodies
Autoantibodies that bind DNA are a hallmark of systemic lupus erythematosus. A subset of autoantibody•DNA complexes localize to kidney tissue and lead to damage and even death. 11F8, 9F11, and 15B10 are clonally related anti-DNA autoantibodies isolated from an autoimmune mouse. 11F8 binds ssDNA in a sequence-specific manner and causes tissue damage, while 9F11 and 15B10 bind ssDNA non-specifically and are benign. Among these antibodies, DNA binding properties are mediated by five amino acid differences in primary sequence. Thermodynamic and kinetic parameters associated with recognition of structurally different DNA sequences were determined for each antibody to provide insight toward recognition strategies, and to explore a link between binding properties and disease pathogenesis. A model of 11F8 bound to its high affinity consensus sequence provides a foundation for understanding the differences in thermodynamic and kinetic parameters between the three mAbs. Our data suggest that 11F8 utilizes the proposed ssDNA recognition motif including Y32 V L , a hydrogen bonding residue at 91 V L , and an aromatic residue at the tip of the third heavy chain complementarity determining region. Interestingly, a somatic mutation to arginine at 31 V H in 11F8 may afford additional binding site contacts including R31 V H , R96 V H , and R98 V H that could determine specificity. © 2007 Wiley Periodicals, Inc. Biopolymers 85: 471–480, 2007. This article was originally published online as an accepted preprint. The “Published Online” date corresponds to the preprint version. You can request a copy of the preprint by emailing the Biopolymers editorial office at [email protected] Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/55984/1/20691_ftp.pd
The two-fluid model with superfluid entropy
The two-fluid model of liquid helium is generalized to the case that the
superfluid fraction has a small entropy content. We present theoretical
arguments in favour of such a small superfluid entropy. In the generalized
two-fluid model various sound modes of HeII are investigated. In a
superleak carrying a persistent current the superfluid entropy leads to a new
sound mode which we call sixth sound. The relation between the sixth sound and
the superfluid entropy is discussed in detail.Comment: 22 pages, latex, published in Nuovo Cimento 16 D (1994) 37
Top Management Team Diversity: A systematic Review
Empirical research investigating the impact of top management team (TMT)
diversity on executives’ decision making has produced inconclusive results.
To synthesize and aggregate the results on the diversity-performance
link, a meta-regression analysis (MRA) is conducted. It integrates more
than 200 estimates from 53 empirical studies investigating TMT diversity
and its impact on the quality of executives’ decision making as reflected
in corporate performance. The analysis contributes to the literature by
theoretically discussing and empirically examining the effects of TMT diversity
on corporate performance. Our results do not show a link between TMT
diversity and performance but provide evidence for publication bias. Thus,
the findings raise doubts on the impact of TMT diversity on performance
Legitimizing intimate partner violence: the role of romantic love and the mediating effect of patriarchal ideologies
Romantic love in heterosexual relationships is recognized as an important aspect to be considered in relation to the psychosocial mechanisms associated with the persistence of intimate partner violence and the help-seeking barriers faced by female victims. However, few studies have explored the processes underlying the relationship between this form of love and attitudes toward this kind of violence. To do this, the current study aims to analyze the relationship between the adherence to romantic love and the legitimization of intimate partner violence (i.e., perceived severity of violence, victim blame, and exoneration of the perpetrator). It was also to test the mediating effect of patriarchal ideologies (i.e., ambivalent sexism and domestic violence myths) on this relationship. Two hundred thirty-five French adults (51.1% women) were surveyed. The data were analyzed with structural equation models to study the mediations between the variables considered. Consistent with our hypotheses, the results showed that the more the participants adhered to romantic love, the more they blamed the victim and exonerated the perpetrator. They also showed a positive link between romantic love, ambivalent sexism, and domestic violence myths. Finally, the results demonstrated that the relationship between romantic love and the legitimization of violence is mediatized by ambivalent sexism and domestic violence myths. The findings illustrate the need to deconstruct romantic love ideology and the psychosocial logics underlying the legitimization of intimate partner violence.info:eu-repo/semantics/publishedVersio
Real Time Turbulent Video Perfecting by Image Stabilization and Super-Resolution
Image and video quality in Long Range Observation Systems (LOROS) suffer from
atmospheric turbulence that causes small neighbourhoods in image frames to
chaotically move in different directions and substantially hampers visual
analysis of such image and video sequences. The paper presents a real-time
algorithm for perfecting turbulence degraded videos by means of stabilization
and resolution enhancement. The latter is achieved by exploiting the turbulent
motion. The algorithm involves generation of a reference frame and estimation,
for each incoming video frame, of a local image displacement map with respect
to the reference frame; segmentation of the displacement map into two classes:
stationary and moving objects and resolution enhancement of stationary objects,
while preserving real motion. Experiments with synthetic and real-life
sequences have shown that the enhanced videos, generated in real time, exhibit
substantially better resolution and complete stabilization for stationary
objects while retaining real motion.Comment: Submitted to The Seventh IASTED International Conference on
Visualization, Imaging, and Image Processing (VIIP 2007) August, 2007 Palma
de Mallorca, Spai
Evaluation of machine-learning methods for ligand-based virtual screening
Machine-learning methods can be used for virtual screening by analysing the structural characteristics of molecules of known (in)activity, and we here discuss the use of kernel discrimination and naive Bayesian classifier (NBC) methods for this purpose. We report a kernel method that allows the processing of molecules represented by binary, integer and real-valued descriptors, and show that it is little different in screening performance from a previously described kernel that had been developed specifically for the analysis of binary fingerprint representations of molecular structure. We then evaluate the performance of an NBC when the training-set contains only a very few active molecules. In such cases, a simpler approach based on group fusion would appear to provide superior screening performance, especially when structurally heterogeneous datasets are to be processed
Evolutionary trajectories in rugged fitness landscapes
We consider the evolutionary trajectories traced out by an infinite
population undergoing mutation-selection dynamics in static, uncorrelated
random fitness landscapes. Starting from the population that consists of a
single genotype, the most populated genotype \textit{jumps} from a local
fitness maximum to another and eventually reaches the global maximum. We use a
strong selection limit, which reduces the dynamics beyond the first time step
to the competition between independent mutant subpopulations, to study the
dynamics of this model and of a simpler one-dimensional model which ignores the
geometry of the sequence space. We find that the fit genotypes that appear
along a trajectory are a subset of suitably defined fitness \textit{records},
and exploit several results from the record theory for non-identically
distributed random variables. The genotypes that contribute to the trajectory
are those records that are not \textit{bypassed} by superior records arising
further away from the initial population. Several conjectures concerning the
statistics of bypassing are extracted from numerical simulations. In
particular, for the one-dimensional model, we propose a simple relation between
the bypassing probability and the dynamic exponent which describes the scaling
of the typical evolution time with genome size. The latter can be determined
exactly in terms of the extremal properties of the fitness distribution.Comment: Figures in color; minor revisions in tex
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