60 research outputs found

    A Small but Efficient Collaboration for the Spiral2 Control System Development

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    http://accelconf.web.cern.ch/AccelConf/ICALEPCS2013/papers/tucobab01.pdfThe Spiral2 radioactive ion beam facility to be commissioned in 2014 at Ganil (Caen) is built within international collaborations. This also concerns the control system development shared by three laboratories: Ganil has to coordinate the control and automated systems work packages, CEA/IRFU is in charge of the "injector" (sources and low energy beam lines) and the LLRF, CNRS/IPHC provides the emittancemeters and a beam diagnostics platform. Besides the technology Epics based, this collaboration, although being handled with a few people, nevertheless requires an appropriate and tight organization to reach the objectives given by the project. This contribution describes how, started in 2006, the collaboration for controls has been managed both from the technological point of view and the organizational one, taking into account not only the previous experience, technical background or skill of each partner, but also their existing working practices and "cultural" approaches. A first feedback comes from successful beam tests carried out at Saclay and Grenoble; a next challenge is the migration to operation, Ganil having to run Spiral2 as the other members are moving to new projects

    Proteogenomic integration reveals therapeutic targets in breast cancer xenografts

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    Recent advances in mass spectrometry (MS) have enabled extensive analysis of cancer proteomes. Here, we employed quantitative proteomics to profile protein expression across 24 breast cancer patient-derived xenograft (PDX) models. Integrated proteogenomic analysis shows positive correlation between expression measurements from transcriptomic and proteomic analyses; further, gene expression-based intrinsic subtypes are largely re-capitulated using non-stromal protein markers. Proteogenomic analysis also validates a number of predicted genomic targets in multiple receptor tyrosine kinases. However, several protein/phosphoprotein events such as overexpression of AKT proteins and ARAF, BRAF, HSP90AB1 phosphosites are not readily explainable by genomic analysis, suggesting that druggable translational and/or post-translational regulatory events may be uniquely diagnosed by MS. Drug treatment experiments targeting HER2 and components of the PI3K pathway supported proteogenomic response predictions in seven xenograft models. Our study demonstrates that MS-based proteomics can identify therapeutic targets and highlights the potential of PDX drug response evaluation to annotate MS-based pathway activities

    Orbital Observations of Dust Lofted by Daytime Convective Turbulence

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    Over the past several decades, orbital observations of lofted dust have revealed the importance of mineral aerosols as a climate forcing mechanism on both Earth and Mars. Increasingly detailed and diverse data sets have provided an ever-improving understanding of dust sources, transport pathways, and sinks on both planets, but the role of dust in modulating atmospheric processes is complex and not always well understood. We present a review of orbital observations of entrained dust on Earth and Mars, particularly that produced by the dust-laden structures produced by daytime convective turbulence called “dust devils”. On Earth, dust devils are thought to contribute only a small fraction of the atmospheric dust budget; accordingly, there are not yet any published accounts of their occurrence from orbit. In contrast, dust devils on Mars are thought to account for several tens of percent of the planet’s atmospheric dust budget; the literature regarding martian dust devils is quite rich. Because terrestrial dust devils may temporarily contribute significantly to local dust loading and lowered air quality, we suggest that martian dust devil studies may inform future studies of convectively-lofted dust on Earth

    Application of Biophysical Techniques to Cellular and Molecular Oncology.

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    Dysregulated cellular processes drive malignant transformation, tumor progression, and metastasis, and affect responses to therapies [...]

    Activation of autophagic flux blunts cardiac ischemia/reperfusion injury

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    RATIONALE: Reperfusion injury accounts for up to half of myocardial infarct size, and meaningful clinical therapies targeting it do not exist. We have reported previously that autophagy is reduced during reperfusion and that HDAC (histone deacetylase) inhibition enhances cardiomyocyte autophagy and blunts ischemia/reperfusion (I/R) injury when administered at the time of reperfusion. However, whether inducing autophagy per se, as opposed to other effects triggered by HDAC inhibition, is sufficient to protect against reperfusion injury is not clear. OBJECTIVE: We set out to test whether augmentation of autophagy using a specific autophagy-inducing peptide, TB (Tat-Beclin), protects the myocardium through reduction of reactive oxygen species (ROS) during reperfusion injury. METHODS AND RESULTS: Eight- to 12-week-old, WT (wild type) C57BL6 mice and tamoxifen-inducible cardiomyocyte-specific ATG7 KO (ATG7 knockout) mice (to test the dependency on autophagy) were randomized into 2 groups: exposed to a control TS (Tat-scrambled) peptide or a TB peptide. Each group was subjected to I/R surgery (45-minute coronary ligation, 24-hour reperfusion). Infarct size, systolic function, autophagic flux, and ROS were assayed. Cultured neonatal rat ventricular myocytes were exposed to TB during simulated I/R injury. ATG7 knockdown by small interfering RNA in neonatal rat ventricular myocytes was used to evaluate the role of autophagy. TB treatment at reperfusion reduced infarct size by 20% (absolute reduction; 50% relative reduction) and improved contractile function. Improvement correlated with increased autophagic flux in the border zone with less oxidative stress. ATG7 KO mice did not manifest TB-promoted cardioprotection during I/R. In neonatal rat ventricular myocytes subjected to I/R, TB reduced cell death by 41% and reduced I/R-induced ROS generation. Conversely, ATG7 knockdown in neonatal rat ventricular myocytes abolished these beneficial effects of TB on cell death and ROS reduction. CONCLUSIONS: Induction of autophagy at the time of reperfusion is sufficient to mitigate myocardial reperfusion injury by reducing ROS and cell death. Maintenance of appropriate autophagic flux may emerge as a viable clinical therapy to reduce reperfusion injury in acute myocardial infarction

    Immediate Disclosure or Secrecy? The Release of Information in Experimental Asset Markets

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    This paper reports the results of experimental asset markets designed to investigate how the public disclosure of uncertain information affects market and individual outcomes. In some markets, no information is released as trading starts, and in others, an imperfect pre-announcement is disclosed. The reliability of the pre-announcement varies across markets. Our data indicate under-reaction to a pre-announcement that is highly reliable and over-reaction to one with much lower reliability. Price volatility is higher and allocational efficiency is lower with a pre-announcement that reflects substantial uncertainty. Furthermore, when the reliability of the pre-announcement is low, traders extract a smaller proportion of the total attainable profit. Thus, in a highly uncertain environment better outcomes may result when information is withheld. These results have important policy implications regarding the disclosure of information by the Federal Reserve. In a highly uncertain environment, better outcomes may actually result with less information
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