Supporting nested parallelism

Many parallel applications do not completely fit into the data parallel model. Although these applications contain data parallelism, task parallelism is needed to represent the natural computation structure or enhance performance. To combine the easiness of programming of the data parallel model with the efficiency of the task parallel model allows to parallel forms to be nested, giving Nested parallelism. In this work, we examine the solutions provided to N ested parallelism in two standard parallel programming platforms, HPF and MPI. Both their expression capacity and their efficiency are compared on a Cray- 3TE, which is distributed memory machine. Finally, an additional speech about the use of the methodology proposed for MPI is done on two different architecturesI Workshop de Procesamiento Distribuido y Paralelo (WPDP)Red de Universidades con Carreras en Informática (RedUNCI

Formulación y análisis fitoquímico de una bebida potencialmente funcional obtenida de la combinación de un extracto de hojas y pulpa de Annona muricata (Annonaceae)

Background and Aims: Annona muricata beverages are widely used in traditional medicine to treat different ailments; however, they have been little characterized phytochemically and are consumed as sugary beverages, and may contribute to non-communicable diseases, including obesity. The objective of this work was to obtain and characterize a sensorially acceptable beverage from an extract of A. muricata leaves and pulp. Methods: A mixture design was used to formulate nine beverages by combining different ratios of the aqueous extract of A. muricata leaves and pulp. These beverages were subjected to physicochemical and sensory evaluation. Based on these results, one beverage was selected to be characterized by spectrophotometry and compared with an infused and commercial beverage. In addition, the selected beverage was further analyzed for its phytochemical composition by ultra-high-performance chromatography coupled to mass spectrometry and high-performance liquid chromatography coupled to a photodiode array detector. Key results: The selected beverage was formulated with 25% pulp, 50% leaf extract, and 25% water; it also displayed a 7.63 °Brix, pH 3.42, and 0.40% acidity. This beverage was up to three times higher in bioactive compounds than infused and commercial beverages. Fourteen phenolic compounds and two acetogenins were quantified, while two alkaloids (coclaurine and reticuline) and fifteen acetogenins were tentatively identified. Conclusions: The combination of A. muricata leaf extract and pulp is a vital alternative to obtain a sensorially acceptable beverage that contains bioactive compounds with a potential medicinal action since the phenolic compounds, alkaloids, and acetogenins present in the beverage could have efficient biological activities in the prevention of chronic degenerative diseases.Antecedentes y Objetivos: Las bebidas de Annona muricata se utilizan ampliamente en la medicina tradicional para tratar diferentes padecimientos; sin embargo, han sido poco caracterizadas fitoquímicamente y se consumen como bebidas azucaradas, y pueden contribuir a enfermedades no trasmisibles, entre ellas la obesidad. El objetivo de este trabajo fue obtener y caracterizar una bebida sensorialmente aceptable a partir de un extracto de hojas y pulpa de A. muricata. Métodos: Se utilizó un diseño de mezcla para formular nueve bebidas, combinando diferentes proporciones del extracto acuoso de hojas y pulpa de A. muricata. Estas bebidas se sometieron a una evaluación fisicoquímica y sensorial. A partir de estos resultados, se seleccionó una bebida para caracterizarla por espectrofotometría y compararla con una bebida infusionada y otra comercial. Además, se analizó la composición fitoquímica de la bebida seleccionada mediante cromatografía de ultra alta resolución acoplada a espectrometría de masas y cromatografía líquida de alta resolución acoplada a un detector de matriz de fotodiodos. Resultados clave: La bebida seleccionada se formuló con 25% de pulpa, 50% de extracto de hojas y 25% de agua; además, presentó un valor de 7.63 °Brix, un pH 3.42 y una acidez de 0.40%. Esta bebida fue hasta tres veces superior en compuestos bioactivos respecto a las bebidas infusionada y comercial. Se cuantificaron catorce compuestos fenólicos y dos acetogeninas, mientras que se identificaron provisionalmente dos alcaloides (coclaurina y reticulina) y quince acetogeninas. Conclusiones: La combinación de extracto de hojas y pulpa de A. muricata es una alternativa vital para obtener una bebida sensorialmente aceptable que contiene compuestos bioactivos con potencial acción medicinal, ya que los compuestos fenólicos, alcaloides y acetogeninas presentes en la bebida podrían tener actividades biológicas eficientes en la prevención de enfermedades crónicas degenerativas

Fan worms (Annelida: Sabellidae) from Indonesia collected by the Snellius II Expedition (1984) with descriptions of three new species and tube microstructure

The Indonesian archipelago is one of the most diverse regions in the marine World. Many contributions on polychaete worms have been published since the Dutch Siboga Expedition to the Indonesian archipelago at the end of the 19th century. In this study, we examined specimens of Sabellidae Latreille, 1825 collected during the Snellius II Expedition (1984) to Indonesia, carried out by the Dutch Research Vessel (RV) “Tyro” and the Indonesian RV “Samudera”. The results include reports of Acromegalomma acrophthalmos, A. interruptum, A. sp., Bispira manicata, B. porifera, B. secusoluta, Branchiomma boholense, Notaulax pyrrohogaster, N. tenuitorques, N. sp. 3, Parasabella crassichaetae, Perkinsiana anodina, and Sabellastarte spectabilis. In addition, three new species are described: Acromegalomma sumbense sp. nov., Claviramus olivager sp. nov., and Notaulax montiporicola sp. nov., the latter in living coral (Montipora nodosa). Further, Sabella (Potamilla) polyophthalmos Grube is transferred to Pseudopotamilla. Additional histological accounts of B. porifera and tube microstructure of A. acrophthalmos, B. porifera, P. anodina, Pseudopotamilla polyophthalmos and Sabellastarte spectabilis are also included

Pregnancy-associated osteoporosis. Presentation of 5 cases and long term monitoring

Fundamento: La osteoporosis del embarazo (OPE) es una entidad claramente descrita y relativamente frecuente, aunque existen pocos estudios que hayan realizado un seguimiento a largo plazo de la enfermedad. Material y métodos: Se estudió a 5 mujeres afectas de osteoporosis del embarazo a las que se les hizo un seguimiento a largo plazo, entre 4 y 16 años. A todas las pacientes se les realizó un cuestionario sobre estilos de vida y factores de riesgo, una exploración física completa, así como una densitometría tras el embarazo y posteriormente cada año mientras duró el seguimiento. Al finalizar éste, se les realizó una radiografía lateral de columna dorsal y lumbar. Resultados: En 3 casos, se produjo una fractura espontánea como primera manifestación de la OPE, mientras que en 2 casos se observó un valor densitométrico muy bajo sin fracturas en el postparto inmediato. Todas las pacientes recibieron un suplemento de calcio y vitamina D, y en 3 casos se indicó un bifosfonato (risedronato). No se observó ninguna nueva fractura en ningún caso a lo largo del periodo de seguimiento. La densidad mineral ósea (DMO) aumentó en la columna lumbar en todas las pacientes, pero en una de ellas se observó un descenso en la medición de cadera, tanto en cuello femoral como en el total de cadera. Ninguna paciente volvió a quedarse embarazada en el periodo de estudio. Conclusiones: Aunque ninguna de las 5 pacientes con OPE estudiadas a largo plazo sufrió una nueva fractura, y en todas se observó un incremento en la densidad mineral ósea de la columna lumbar, lo que nos hace pensar en una recuperación de la DMO con el tiempo, en 1 caso se produjo un descenso considerable de la densidad mineral ósea en fémur proximal, por lo que creemos que es recomendable realizar seguimientos a largo plazo a estas pacientes.Background: Pregnancy-associated osteoporosis (PAO) is a clearly described and relatively frequent entity, although there are few studies which have carried out long term monitoring of the disease. Material and methods: 5 women affected by osteoporosis who were monitored over the long term, between 4 and 16 years. In all the patients a questionnaire on lifestyle and risk factors was completed and a physical examination carried out, as well as densitometry after the pregnancy and subsequently every year during the follow up period. At the end of this period, a lateral X-ray of the dorsal and lumbar spine was performed. Results: In 3 cases there was a spontaneous fracture as the first manifestation of PAO, while in 2 cases a very low densitometric value was observed, without fractures, in the immediate postpartum period. All the patients received calcium and vitamin D supplements, and in 3 cases a biphosphonate (risedronate) was indicated. No new fractures were observed in any of the cases over the follow up period. The bone mineral density (BMD) increased in the lumbar spine in all the patients, but in one a decreased measu rement was observed in the hip, both in the femoral neck and the total hip. None of the patients beca me pregnant again in the period of the study. Conclusions: While none of the patients with PAO studied over the long term suffered a new fracture, and in all an increase in the bone mineral density in the lumbar spine was observed, which makes us think that there is a recovery of DMO over time, in one case there was a considerable decrease in bone mineral density in the proximal femur, for which reason we believe that it is advisable to carry out long term monitoring of these patients

Effects of Sex, Age and Height on Symphysis–Ischial Spine Distance Measured on a Pelvic CT

Objective: To examine the influence of age, sex and height on the symphysis–ischial spine distance (SID) measured on pelvic Computed tomography (CT)images in subjects of reproductive age, and to determine the interobserver reproducibility. This measurement (SID) is of great importance because the use of intrapartum ultrasound is based on the assumption of a specific value (30 mm) of such a measurement. Methods: This was a cross-sectional descriptive study in which SID was measured in subjects aged 20 to 44 years who had been scheduled for pelvic CT at our centre from January 2018 to May 2021 for different reasons. Radiographic measurements of the pelvis were obtained through the multiplanar reconstruction of the CT image. The images obtained from all of the participants were independently assessed by three senior radiologists, and the SID measurements made by each one were blinded from those of the remaining observers. Correlations between the SID and patient age, height and sex were analyzed by univariate and multivariate linear regression. Results: The mean SID for 87 of the enrolled participants (45 women, 42 men) was 28.2 ± 6.25 mm. Among the observers, the mean difference in this distance was 1 to 2 mm, and was scarcely related to measurement size, with agreement being greater than 70%. The mean SID was significantly related to sex and height (SID = −24.9 − 6.51 × sex (0 or 1) + 0.34 × height (cm); p = 0.01; sex equals 1 for a man and 0 for a woman), such that it was a mean of 2.5 mm greater in women than men (29.50 mm vs. 26.99 mm). Conclusion: Measurements of SID on CT images show good interobserver reproducibility, and are related to sex and height.Depto. de Salud Pública y Materno - InfantilFac. de MedicinaTRUEUnión EuropeaComunidad de MadridInstituto de Salud Carlos IIIHalekulani S.L.pu

Supporting nested parallelism

Many parallel applications do not completely fit into the data parallel model. Although these applications contain data parallelism, task parallelism is needed to represent the natural computation structure or enhance performance. To combine the easiness of programming of the data parallel model with the efficiency of the task parallel model allows to parallel forms to be nested, giving Nested parallelism. In this work, we examine the solutions provided to N ested parallelism in two standard parallel programming platforms, HPF and MPI. Both their expression capacity and their efficiency are compared on a Cray- 3TE, which is distributed memory machine. Finally, an additional speech about the use of the methodology proposed for MPI is done on two different architecturesI Workshop de Procesamiento Distribuido y Paralelo (WPDP)Red de Universidades con Carreras en Informática (RedUNCI

Mycorrhiza induced resistance against pests: from the lab to the field

1 página - Conferencia invitada presentada en Iberian Plant Biology 2023. XVIII Portuguese-Spanish Congress on Plant Biology and the XXV Meeting of the Spanish Society of Plant Biology. 9-12 Julio 2023, Braga, PortugalArbuscular mycorrhizal fungi (AMF) can prime plant defences increasing their resistance against pathogens and insect herbivores. Using tomato as a model, we have shown that inoculation with different AMF reduces the performance of the chewing herbivore Spodoptera exigua and the leaf miner Tuta absoluta. Transcriptomic and metabolomics analyses revealed that this Mycorrhiza Induced Resistance (MIR) is associated to boosted activation of plant direct and indirect defences in response to the attackers. We found primed accumulation in attacked leaves of antiherbivore metabolites, including alkaloids and polyamine conjugates, and functional analyses demonstrated that some of the identified compounds significantly inhibit herbivore development. In addition, the symbiosis altered the volatile blends released by the plant, and enhanced the attraction of natural enemies of the pests (Nesidiocoris tenuis, commonly used in biocontrol programs). Finally, networks analyses allowed the identification of key regulators of the primed response within the jasmonic acid and ethylene signalling pathways. Despite the many studies showing induced resistance by microorganisms in different plant‐pest systems, the variability in the protection achieved under agronomic settings is hindering the application of this strategy in agriculture. Plant‐microbe‐herbivore interactions are highly context dependent, with multiple biotic and abiotic factors influencing the final output. Identifying such factors is essential to optimize the application of microbial inoculants for crop protection in agriculture. We found that the plant genotype and nutrient availability are important drivers of the context dependency of MIR in tomato. Despite of the variability, comparisons across different experimental scales, from controlled lab set‐ups to commercial production conditions, confirmed that MIR can be achieved under crop production conditions and is compatible with other biocontrol methods. Accordingly, MIR can be a relevant addition to current Integrated Pest Management Programs

High dose chemotherapy and autologous stem cell transplantation in patients with peripheral T-cell lymphoma not achieving complete response after induction chemotherapy. The GEL-TAMO experience

Background and objectives: patients with aggressive non-Hodgkin's lymphomas (NHL) who do not obtain a complete response (CR) after induction chemotherapy have a poor prognosis. However, provided they are sensitive to the first regimen of chemotherapy, 25-40% of them with a B-cell phenotype may achieve long-term survival when treated with high dose chemotherapy and autologous stem cell transplantation (HDC/ASCT). The aim of this study was to analyze the efficacy of this therapy in the corresponding patients with peripheral T-cell lymphoma (PTCL). Design and methods: we retrospectively evaluated the efficacy of ASCT in 35 patients with PTCL from the GEL-TAMO registry, who did not achieve a CR to standard induction chemotherapy regimens for aggressive NHL. Thirty-one patients underwent transplantation after achieving a partial response (PR) and 4 patients were non-responders. Results: following HDC/ASCT, 23 (66%) of the patients achieved a CR, 4 (11%) a PR and in 7 (20%) cases the transplant failed. One patient was not evaluated because of early toxic death. With a median follow-up of the survivors of 37.5 months, 18 patients (51%) are alive and 15 patients (43%) are free of disease. Transplant-related mortality rate at 100 days was 11% and at 5 years the probabilities of survival, freedom from progression and disease-free survival for complete responders were 37%, 36% and 55% respectively. Pre-transplant lactate-dehydrogenase level, age-adjusted International Prognostic Index (aa-IPI) and tumor score correlated with survival. Interpretation and conclusions: one third of the patients with PTCL who fail to achieve CR to the first chemotherapeutic regimen can be rescued with HDC/ASCT. Pre-transplant values of IPI and tumor score risk systems for aggressive lymphomas were useful to predict subsequent survival

Mineralogy, geochemistry and sulfur isotope characterization of Cerro de Maimón (Dominican Republic), San Fernando and Antonio (Cuba) lower Cretaceous VMS deposits: Formation during subduction initiation of the proto-Caribbean lithosphere within a fore-arc

The volcanic-arc Lower Cretaceous Maimón (Dominican Republic) and Los Pasos (Cuba) Formations, representative of the oldest magmatism recorded in the Caribbean island arc, host most of the known volcanogenic massive sulfide (VMS) deposits in the Greater Antilles. On the basis of new lithogeochemical data, basalts of the Maimón Formation are classified as fore arc basalts (FAB), boninites and less abundant low-Ti (LOTI) and normal island-arc tholeiites (IAT), and those of the Los Pasos Formation as LOTI and IAT. Felsic volcanics from the two formations are geochemically analogous and present mantle-type (M-type), boninitic and tholeiitic signatures, classifying as FIV-type, typical of post-Archaean VMS-bearing juvenile volcanic suites. This lithogeochemical data is indicative of formation in a fore-arc environment just after subduction initiation in association with initial extensional regimes and associated boninitic and tholeiitic melts that originated in the shallow mantle. Within this tectonic framework, rocks of the Los Pasos Formation and associated VMS deposits likely formed at a slightly later stage than those of the Maimón Formatio