111 research outputs found
Mind the Gap: Persistent and Mobile Organic Compounds—Water Contaminants That Slip Through
The discharge of persistent and mobile organic chemicals (PMOCs) into the aquatic environment is a threat to the quality of our water resources. PMOCs are highly polar (mobile in water) and can pass through wastewater treatment plants, subsurface environments and potentially also drinking water treatment processes. While a few such compounds are known, we infer that their number is actually much larger. This Feature highlights the issue of PMOCs from an environmental perspective and assesses the gaps that appear to exist in terms of analysis, monitoring, water treatment and regulation. On this basis we elaborate strategies on how to narrow these gaps with the intention to better protect our water resources
Using a combination of quantitative culture, molecular, and infrastructure data to rank potential sources of fecal contamination in Town Creek Estuary, North Carolina
Estuarine water quality is declining worldwide due to increased tourism, coastal development, and a changing climate. Although well-established methods are in place to monitor water quality, municipalities struggle to use the data to prioritize infrastructure for monitoring and repair and to determine sources of contamination when they occur. The objective of this study was to assess water quality and prioritize sources of contamination within Town Creek Estuary (TCE), Beaufort, North Carolina, by combining culture, molecular, and geographic information systems (GIS) data into a novel contamination source ranking system. Water samples were collected from TCE at ten locations on eight sampling dates in Fall 2021 (n = 80). Microbiological water quality was assessed using US Environmental Protection Agency (U.S. EPA) approved culture-based methods for fecal indicator bacteria (FIB), including analysis of total coliforms (TC), Escherichia coli (EC), and Enterococcus spp. (ENT). The quantitative microbial source tracking (qMST) human-associated fecal marker, HF183, was quantified using droplet digital PCR (ddPCR). This information was combined with environmental data and GIS information detailing proximal sewer, septic, and stormwater infrastructure to determine potential sources of fecal contamination in the estuary. Results indicated FIB concentrations were significantly and positively correlated with precipitation and increased throughout the estuary following rainfall events (p < 0.01). Sampling sites with FIB concentrations above the U.S. EPA threshold also had the highest percentages of aged, less durable piping materials. Using a novel ranking system combining concentrations of FIB, HF183, and sewer infrastructure data at each site, we found that the two sites nearest the most aged sewage infrastructure and stormwater outflows were found to have the highest levels of measurable fecal contamination. This case study supports the inclusion of both traditional water quality measurements and local infrastructure data to support the current need for municipalities to identify, prioritize, and remediate failing infrastructure
Heterogeneity assessment of functional T cell avidity.
The potency of cellular immune responses strongly depends on T cell avidity to antigen. Yet, functional avidity measurements are rarely performed in patients, mainly due to the technical challenges of characterizing heterogeneous T cells. The mean functional T cell avidity can be determined by the IFN-γ Elispot assay, with titrated amounts of peptide. Using this assay, we developed a method revealing the heterogeneity of functional avidity, represented by the steepness/hillslope of the peptide titration curve, documented by proof of principle experiments and mathematical modeling. Our data show that not only natural polyclonal CD8 T cell populations from cancer patients, but also monoclonal T cells differ strongly in their heterogeneity of functional avidity. Interestingly, clones and polyclonal cells displayed comparable ranges of heterogeneity. We conclude that besides the mean functional avidity, it is feasible and useful to determine its heterogeneity (hillslope) for characterizing T cell responses in basic research and patient investigation
Global patient outcomes after elective surgery: prospective cohort study in 27 low-, middle- and high-income countries.
BACKGROUND: As global initiatives increase patient access to surgical treatments, there remains a need to understand the adverse effects of surgery and define appropriate levels of perioperative care. METHODS: We designed a prospective international 7-day cohort study of outcomes following elective adult inpatient surgery in 27 countries. The primary outcome was in-hospital complications. Secondary outcomes were death following a complication (failure to rescue) and death in hospital. Process measures were admission to critical care immediately after surgery or to treat a complication and duration of hospital stay. A single definition of critical care was used for all countries. RESULTS: A total of 474 hospitals in 19 high-, 7 middle- and 1 low-income country were included in the primary analysis. Data included 44 814 patients with a median hospital stay of 4 (range 2-7) days. A total of 7508 patients (16.8%) developed one or more postoperative complication and 207 died (0.5%). The overall mortality among patients who developed complications was 2.8%. Mortality following complications ranged from 2.4% for pulmonary embolism to 43.9% for cardiac arrest. A total of 4360 (9.7%) patients were admitted to a critical care unit as routine immediately after surgery, of whom 2198 (50.4%) developed a complication, with 105 (2.4%) deaths. A total of 1233 patients (16.4%) were admitted to a critical care unit to treat complications, with 119 (9.7%) deaths. Despite lower baseline risk, outcomes were similar in low- and middle-income compared with high-income countries. CONCLUSIONS: Poor patient outcomes are common after inpatient surgery. Global initiatives to increase access to surgical treatments should also address the need for safe perioperative care. STUDY REGISTRATION: ISRCTN5181700
Dissolved organic matter dynamic in the Amazon basin : sorption by mineral surfaces
In aquatic systems, soprtion of organic matter (OM) on environmental surfaces or its preference to remain dissolved is highly important for determining its potential transport and/or susceptibility to degradation. In the Amazon and other major rivers of the world, transported OM is either adsorbed to fine minerals or remains dissolved. The fate of autochthonous OM in Amazon floodplains and allochthonous OM from the river can be addressed by characterizing the nature of OM interactions with the sediment material. This goal was pursued in this study using Rio Negro and Amazon River samples as well as those collected from floodplain lakes during phytoplanktonic blooms, small black rivers, soil solution issued from podzolic areas in the Rio Negro watershed and "terra firme" stream flowing into the floodplain. The amount of carbon surface loading expressed as the adsorbed organic carbon per unit of surface area of the substrate was obtained by batch experiments with mineral phases representative of soils, suspended matter found in the Amazon basin and extracted OM fractions (the hydrophobic, HPO and the transphilic, TPH fractions of OM). The bulk dissolved organic matter samples were characterized by carbon and nitrogen isotopic measurements as well as elementary composition, specific UV absorbance (SUVA), molecular weight (Mw) and FTIR spectroscopy. To our knowledge, these are the first C and N isotopic composition data reported for extracted OM fractions in the Amazon basin. The Rio Negro basin water samples had high [DOC] correlated with conductivity. The SUVA values ranged from 4.0 to 7.3 m(-1)l mg(-1)C and were within the range of measurements reported for the Amazon River. The delta C-13 values of all HPO fractions varied from -27.7 to -30.2%.. The delta C-13 values for the TPH fractions were systematically 1%. higher than their respective HPO fraction. An increasing trend between the weight average Mw of the DOC as function of the C/N ratio (the higher C/N the higher Mw) is reported. This trend is inferred to result from both mixing between 2 end-members and OM fractionation. Carbon surface loadings calculated for HPO and TPH fractions ranged between 23 to 309 mu gC m(-2) and 38 to 145 mu gC m(-2), respectively. Carbon surface loadings with goethite and the Rio Negro organic matter fractions cluster around the average value of 24.5 +/- 4 mu gC m(-2). With the help of the pH dependant dissociation measurements and NICA-Donnan model parameters, it was possible to estimate the amount of deprotonated sites on the OM interacting with the sediment material. The amount of carbon surface loading was correlated with the calculated residual negative charge of the OM fractions (i.e. HPO or TPH). These analyses showed that higher residual negative charges were associated with lower carbon surface loadings on the treated sediment. The decrease of the negative charge was suggested to reduce the net electrostatic repulsion between the OM fractions and the clay surfaces and promote ligand exchange reactions governing sorption to clays. The preferential uptake of the high molecular weight fraction demonstrates that the chemical nature of the organic matter remaining in solution differs from that of the adsorbed fraction
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Obama's Victory of Hope over Hate
The use of virtualization in high-performance computing (HPC) has been suggested as a means to provide tailored services and added functionality that many users expect from full-featured Linux cluster environments. The use of virtual machines in HPC can offer several benefits, but maintaining performance is a crucial factor. In some instances the performance criteria are placed above the isolation properties. This selective relaxation of isolation for performance is an important characteristic when considering resilience for HPC environments that employ virtualization. In this paper we consider some of the factors associated with balancing performance and isolation in configurations that employ virtual machines. In this context, we propose a classification of errors based on the concept of “error zones”, as well as a detailed analysis of the trade-offs between resilience and performance based on the level of isolation provided by virtualization solutions. Finally, a set of experiments are performed using different virtualization solutions to elucidate the discussion
Effects of charging on the chromophores of dissolved organic matter from the Rio Negro basin
This study demonstrates that the deprotonation of dissolved organic matter (DOM) originating
from a small creek characteristic for DOM-rich waters located in the Rio Negro basin
can be quantified based on measurements of pH effects on its absorbance spectra. The
method was ascertained by the data of Near-Edge X-Ray Absorbance Spectroscopy (NEXAFS),
potentiometric titration to quantify the structural and compositional differences
between the colloidal and hydrophobic fractions that contribute 91% of black-water creek
DOM. Changes in the absorbance spectra of the DOM fractions caused by deprotonation
quantified via numeric deconvolution which indicated the presence of six well-resolved
Gaussian bands in the differential spectra. The emergence of these bands was determined
to be associated with the engagement of carboxylic and phenolic functionalities and
changes of inter-chromophore interactions in DOM molecules. Interpretation of the data
based on the NICA-Donnan approach showed that behavior of DOM chromophores was
consistent with results of potentiometric titrations. Similar trends were observed for
changes of the spectral slope of the DOM absorbance spectra in the range of wavelengths
325e375 nm (DSlope325e375). The behavior of DSlope325e375 values was modeled based on
the NICA-Donnan approach and correlated with potentiometrically-estimated charge
Using a combination of quantitative culture, molecular, and infrastructure data to rank potential sources of fecal contamination in Town Creek Estuary, North Carolina.
Estuarine water quality is declining worldwide due to increased tourism, coastal development, and a changing climate. Although well-established methods are in place to monitor water quality, municipalities struggle to use the data to prioritize infrastructure for monitoring and repair and to determine sources of contamination when they occur. The objective of this study was to assess water quality and prioritize sources of contamination within Town Creek Estuary (TCE), Beaufort, North Carolina, by combining culture, molecular, and geographic information systems (GIS) data into a novel contamination source ranking system. Water samples were collected from TCE at ten locations on eight sampling dates in Fall 2021 (n = 80). Microbiological water quality was assessed using US Environmental Protection Agency (U.S. EPA) approved culture-based methods for fecal indicator bacteria (FIB), including analysis of total coliforms (TC), Escherichia coli (EC), and Enterococcus spp. (ENT). The quantitative microbial source tracking (qMST) human-associated fecal marker, HF183, was quantified using droplet digital PCR (ddPCR). This information was combined with environmental data and GIS information detailing proximal sewer, septic, and stormwater infrastructure to determine potential sources of fecal contamination in the estuary. Results indicated FIB concentrations were significantly and positively correlated with precipitation and increased throughout the estuary following rainfall events (p < 0.01). Sampling sites with FIB concentrations above the U.S. EPA threshold also had the highest percentages of aged, less durable piping materials. Using a novel ranking system combining concentrations of FIB, HF183, and sewer infrastructure data at each site, we found that the two sites nearest the most aged sewage infrastructure and stormwater outflows were found to have the highest levels of measurable fecal contamination. This case study supports the inclusion of both traditional water quality measurements and local infrastructure data to support the current need for municipalities to identify, prioritize, and remediate failing infrastructure
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