196 research outputs found
ATP binding to a multisubunit enzyme: statistical thermodynamics analysis
Due to inter-subunit communication, multisubunit enzymes usually hydrolyze
ATP in a concerted fashion. However, so far the principle of this process
remains poorly understood. In this study, from the viewpoint of statistical
thermodynamics, a simple model is presented. In this model, we assume that the
binding of ATP will change the potential of the corresponding enzyme subunit,
and the degree of this change depends on the state of its adjacent subunits.
The probability of enzyme in a given state satisfies the Boltzmann's
distribution. Although it looks much simple, this model can fit the recent
experimental data of chaperonin TRiC/CCT well. From this model, the dominant
state of TRiC/CCT can be obtained. This study provided a new way to understand
biophysical processes by statistical thermodynamics analysis
Effects of various additives to enhance growth performance, blood profiles, and reduce malodour emissions in growing pigs
Experiment 1 was a feeding trial in which 75 (Landrace â
č Yorkshire) â
č Duroc pigs with average initial bodyweight (BW) of 26 ± 1 kg were used. It was assigned to three pigs/pen and five pens/treatment. Experiment 2 was a metabolic trial in which 25 (Landraceâ
čYorkshire)â
čDuroc pigs with average initial bodyweight (BW) of 36 ± 1 kg were used. The basal diet consisted of maize (57.71 %), soybean meal (32.45 %), and wheat bran (5 %). Treatments consisted of i) CON (control diet); ii) OE (organic acid + essential oils) (Aviplus-SÂź), that is, CON + 0.05 % OE; iii) OC (organic charcoal) (Olga BlackÂź), that is, CON + 0.1 % OC; iv) AE (anise extracts) (RESQÂź), that is, CON + 0.015 % AE; and v) PB (probiotics) (BonvitalÂź), that is, CON + 0.1 % PB. Average daily gain (ADG) and gain/feed ratio (G : F) were significantly higher in the OE and AE groups than in the others. Average daily feed intake (ADFI) for OE, OC, and AE treatments was significantly higher than that for CON and PB treatments. Dry matter (DM) digestibility was significantly higher in AE than CON. Crude protein (CP) was significantly higher in OE, AE, and PB than CON. CON and other treatments did not cause significant differences in blood l-density lipoprotein (LDL), and glucose. NH3 emissions were significantly lower in all treated groups than in CON. Among the treatments, NH3 emissions were lowest in OE and AE. H2S emissions were significantly lower in OE, AE, and PB than in CON. Among the treatments, OE and AE were most effective at reducing H2S emissions. The emissions of volatile fatty acids (VFAs) showed no significant difference between treatments and CON. In conclusion, this experiment was shown to be more effective on growth performance, malodour emission, blood profiles, and nutrient digestibility in OE and AE than other additives.Keywords: Digestibility, feed, influence, odour, supplementation, swin
Toroidal mode number estimation of the edge-localized modes using the KSTAR 3-D electron cyclotron emission imaging system
A new and more accurate technique is presented for determining the toroidal mode number n of edge-localized modes (ELMs) using two independent electron cyclotron emission imaging (ECEI) systems in the Korea Superconducting Tokamak Advanced Research (KSTAR) device. The technique involves the measurement of the poloidal spacing between adjacent ELM filaments, and of the pitch angle ?? O of filaments at the plasma outboard midplane. Equilibrium reconstruction verifies that ?? O is nearly constant and thus well-defined at the midplane edge. Estimates of n obtained using two ECEI systems agree well with n measured by the conventional technique employing an array of Mirnov coils.open3
Observation of exclusive DVCS in polarized electron beam asymmetry measurements
We report the first results of the beam spin asymmetry measured in the
reaction e + p -> e + p + gamma at a beam energy of 4.25 GeV. A large asymmetry
with a sin(phi) modulation is observed, as predicted for the interference term
of Deeply Virtual Compton Scattering and the Bethe-Heitler process. The
amplitude of this modulation is alpha = 0.202 +/- 0.028. In leading-order and
leading-twist pQCD, the alpha is directly proportional to the imaginary part of
the DVCS amplitude.Comment: 6 pages, 5 figure
Density dependence of ion cyclotron emission from deuterium plasmas in the large helical device
Ion cyclotron emission (ICE) driven by perpendicular neutral beam-injected (NBI) deuterons, together with the distinctive ICE driven by tangential NBI, have been observed from heliotronâstellarator plasmas in the large helical device (LHD). Radio frequency radiation in the lower hybrid range has also been observed Saito K. et al (2018 Plasma Fusion Res. 13 3402043), with frequency dependent on plasma density. Here we focus on recent measurements of ICE from deuterium plasmas in LHD, which show substantial variation in spectral character, between otherwise similar plasmas that have different local density in the emitting region. We analyse this variation by means of first principles simulations, carried out using a particle-in-cell (PIC) kinetic approach. We show, first, that this ICE is driven by perpendicular NBI deuterons, freshly ionised near their injection point in the outer midplane edge of LHD. We find that these NBI deuterons undergo collective sub-AlfvĂ©nic relaxation, which we follow deep into the nonlinear phase of the magnetoacoustic cyclotron instability (MCI). The frequency and wavenumber dependence of the saturated amplitudes of the excited fields determine our simulated ICE spectra, and these spectra are obtained for different local densities corresponding to the different LHD ICE-emitting plasmas. The variation with density of the spectral character of the simulated ICE corresponds well with that of the observed ICE from LHD. These results from heliotronâstellarator plasmas complement recent studies of density-dependent ICE from tokamak plasmas in KSTAR Thatipamula S.G. et al (2016 Plasma Phys. Control. Fusion 58 065003); Chapman B. et al (2017 Nucl. Fusion 57 124004), where the spectra vary on sub-microsecond timescales after an ELM crash. Taken together, these results confirm the strongly spatially localised character of ICE physics, and reinforce the potential of ICE as a diagnostic of energetic ion populations and of the ambient plasma
Complete measurement of three-body photodisintegration of 3He for photon energies between 0.35 and 1.55 GeV
The three-body photodisintegration of 3He has been measured with the CLAS
detector at Jefferson Lab, using tagged photons of energies between 0.35 GeV
and 1.55 GeV. The large acceptance of the spectrometer allowed us for the first
time to cover a wide momentum and angular range for the two outgoing protons.
Three kinematic regions dominated by either two- or three-body contributions
have been distinguished and analyzed. The measured cross sections have been
compared with results of a theoretical model, which, in certain kinematic
ranges, have been found to be in reasonable agreement with the data.Comment: 22 pages, 25 eps figures, 2 tables, submitted to PRC. Modifications:
removed 2 figures, improvements on others, a few minor modifications to the
tex
A Kinematically Complete Measurement of the Proton Structure Function F2 in the Resonance Region and Evaluation of Its Moments
We measured the inclusive electron-proton cross section in the nucleon
resonance region (W < 2.5 GeV) at momentum transfers Q**2 below 4.5 (GeV/c)**2
with the CLAS detector. The large acceptance of CLAS allowed for the first time
the measurement of the cross section in a large, contiguous two-dimensional
range of Q**2 and x, making it possible to perform an integration of the data
at fixed Q**2 over the whole significant x-interval. From these data we
extracted the structure function F2 and, by including other world data, we
studied the Q**2 evolution of its moments, Mn(Q**2), in order to estimate
higher twist contributions. The small statistical and systematic uncertainties
of the CLAS data allow a precise extraction of the higher twists and demand
significant improvements in theoretical predictions for a meaningful comparison
with new experimental results.Comment: revtex4 18 pp., 12 figure
eta-prime photoproduction on the proton for photon energies from 1.527 to 2.227 GeV
Differential cross sections for the reaction gamma p -> eta-prime p have been
measured with the CLAS spectrometer and a tagged photon beam with energies from
1.527 to 2.227 GeV. The results reported here possess much greater accuracy
than previous measurements. Analyses of these data indicate for the first time
the coupling of the etaprime N channel to both the S_11(1535) and P_11(1710)
resonances, known to couple strongly to the eta N channel in photoproduction on
the proton, and the importance of j=3/2 resonances in the process.Comment: 6 pages, 3 figure
Measurement of the Deuteron Structure Function F2 in the Resonance Region and Evaluation of Its Moments
Inclusive electron scattering off the deuteron has been measured to extract
the deuteron structure function F2 with the CEBAF Large Acceptance Spectrometer
(CLAS) at the Thomas Jefferson National Accelerator Facility. The measurement
covers the entire resonance region from the quasi-elastic peak up to the
invariant mass of the final-state hadronic system W~2.7 GeV with four-momentum
transfers Q2 from 0.4 to 6 (GeV/c)^2. These data are complementary to previous
measurements of the proton structure function F2 and cover a similar
two-dimensional region of Q2 and Bjorken variable x. Determination of the
deuteron F2 over a large x interval including the quasi-elastic peak as a
function of Q2, together with the other world data, permit a direct evaluation
of the structure function moments for the first time. By fitting the Q2
evolution of these moments with an OPE-based twist expansion we have obtained a
separation of the leading twist and higher twist terms. The observed Q2
behaviour of the higher twist contribution suggests a partial cancellation of
different higher twists entering into the expansion with opposite signs. This
cancellation, found also in the proton moments, is a manifestation of the
"duality" phenomenon in the F2 structure function
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