Functional generalized additive models

We introduce the functional generalized additive model (FGAM), a novel regression model for association studies between a scalar response and a functional predictor. We model the link-transformed mean response as the integral with respect to t of F{X(t), t} where F(·, ·) is an unknown regression function and X(t) is a functional covariate. Rather than having an additive model in a finite number of principal components as by Müller and Yao (2008), our model incorporates the functional predictor directly and thus our model can be viewed as the natural functional extension of generalized additive models. We estimate F(·, ·) using tensor-product B-splines with roughness penalties. A pointwise quantile transformation of the functional predictor is also considered to ensure each tensor-product B-spline has observed data on its support. The methods are evaluated using simulated data and their predictive performance is compared with other competing scalar-on-function regression alternatives. We illustrate the usefulness of our approach through an application to brain tractography, where X(t) is a signal from diffusion tensor imaging at position, t, along a tract in the brain. In one example, the response is disease-status (case or control) and in a second example, it is the score on a cognitive test. The FGAM is implemented in R in the refund package. There are additional supplementary materials available online. © 2013 American Statistical Association, Institute of Mathematical Statistics, and Interface Foundation of North America

Bayesian Functional Generalized Additive Models with Sparsely Observed Covariates

The functional generalized additive model (FGAM) was recently proposed in McLean et al. (2013) as a more flexible alternative to the common functional linear model (FLM) for regressing a scalar on functional covariates. In this paper, we develop a Bayesian version of FGAM for the case of Gaussian errors with identity link function. Our approach allows the functional covariates to be sparsely observed and measured with error, whereas the estimation procedure of McLean et al. (2013) required that they be noiselessly observed on a regular grid. We consider both Monte Carlo and variational Bayes methods for fitting the FGAM with sparsely observed covariates. Due to the complicated form of the model posterior distribution and full conditional distributions, standard Monte Carlo and variational Bayes algorithms cannot be used. The strategies we use to handle the updating of parameters without closed-form full conditionals should be of independent interest to applied Bayesian statisticians working with nonconjugate models. Our numerical studies demonstrate the benefits of our algorithms over a two-step approach of first recovering the complete trajectories using standard techniques and then fitting a functional regression model. In a real data analysis, our methods are applied to forecasting closing price for items up for auction on the online auction website eBay

Nuclear structure beyond the neutron drip line: the lowest energy states in 9^9He via their T=5/2 isobaric analogs in 9^9Li

The level structure of the very neutron rich and unbound $^9$He nucleus has been the subject of significant experimental and theoretical study. Many recent works have claimed that the two lowest energy $^9$He states exist with spins $J^\pi=1/2^+$ and $J^\pi=1/2^-$ and widths on the order of hundreds of keV. These findings cannot be reconciled with our contemporary understanding of nuclear structure. The present work is the first high-resolution study with low statistical uncertainty of the relevant excitation energy range in the $^8$He$+n$ system, performed via a search for the T=5/2 isobaric analog states in $^9$Li populated through $^8$He+p elastic scattering. The present data show no indication of any narrow structures. Instead, we find evidence for a broad $J^{\pi}=1/2^+$ state in $^9$He located approximately 3 MeV above the neutron decay threshold

New Role, New Country: introducing US physician assistants to Scotland

This paper draws from research commissioned by the Scottish Executive Health Department (SEHD). It provides a case study in the introduction of a new health care worker role into an already well established and "mature" workforce configuration It assesses the role of US style physician assistants (PAs), as a precursor to planned "piloting" of the PA role within the National Health Service (NHS) in Scotland

Incremental bounded model checking for embedded software

Program analysis is on the brink of mainstream usage in embedded systems development. Formal verification of behavioural requirements, finding runtime errors and test case generation are some of the most common applications of automated verification tools based on bounded model checking (BMC). Existing industrial tools for embedded software use an off-the-shelf bounded model checker and apply it iteratively to verify the program with an increasing number of unwindings. This approach unnecessarily wastes time repeating work that has already been done and fails to exploit the power of incremental SAT solving. This article reports on the extension of the software model checker CBMC to support incremental BMC and its successful integration with the industrial embedded software verification tool BTC EMBEDDED TESTER. We present an extensive evaluation over large industrial embedded programs, mainly from the automotive industry. We show that incremental BMC cuts runtimes by one order of magnitude in comparison to the standard non-incremental approach, enabling the application of formal verification to large and complex embedded software. We furthermore report promising results on analysing programs with arbitrary loop structure using incremental BMC, demonstrating its applicability and potential to verify general software beyond the embedded domain

Should I stay or should I go? Patient understandings of and responses to source-isolation practices,

Isolation of patients, who are colonised or infected with a multidrug-resistant organism (source-isolation), is a common practice in most acute health-care settings, to prevent transmission to other patients. Efforts to improve the efficacy of source-isolation in hospitals focus on healthcare staff compliance with isolation precautions. In this article we examine patients’ awareness, understandings and observance of source-isolation practices and directives with a view to understanding better the roles patients play or could play in transmitting, or limiting transmission, of multidrug-resistant organisms (MRO). Seventeen source-isolated adult surgical patients and two relatives participated in video-reflexive ethnography and interviews. We learned that, although most of these patients wanted to protect themselves and others from colonisation/infection with a MRO, they had a limited understanding of what precautions they could take while in isolation and found it difficult to obtain ongoing information. Thus, many patients regularly left their source-isolation rooms without taking appropriate precautions and were potentially contributing to environmental contamination and transmission. Some patients also interacted with other patients and their personal belongings in ways that exposed other patients, unnecessarily, to colonisation/infection risk. By not providing patients with adequate information on infection risk or how they could contribute to their own safety or that of others, they are denied the opportunity to fully engage in their healthcare. To improve the efficacy of source-isolation and contact precautions in general, patient care providers should consider colonised or infected patients as active partners in reducing transmission and involve patients and relatives in regular, ongoing conversations about transmission prevention.Keywords: Patient involvement, patient experience, patient engagement, patient- and family-centred care, source-isolation, MRSA, infection prevention and control, qualitative methods, health literacyThis study was funded by the National Health and Medical Research Council (project grant # 1009178

How Do Marital Transitions Affect Self-Perceptions of Aging?

Objectives We analyzed whether marital status and experiences of marital loss or gain were associated with self-perceptions of aging (SPA), a major psychosocial mechanism of healthy aging. Method We used data from 7028 participants of the Health and Retirement Study. Participants reported their marital status and their positive and negative SPA on two occasions 4 years apart. We ran general linear models to analyze differences in SPA between men and women who remained married, became divorced or widowed, or remarried following divorce or widowhood. Results Participants who experienced marital loss had lower positive SPA than participants who remained marred. Participants who experienced marital gain had lower negative SPA than participants who remained married. None of the associations differed between men and women. Discussion Results suggest that it may not be marital status itself, but rather the transition into or out of marriage, that impacts how people appraise their own aging

Enhanced He-alpha emission from "smoked" Ti targets irradiated with 400nm, 45 fs laser pulses

We present a study of He-like 1s(2)-1s2p line emission from solid and low-density Ti targets under similar or equal to 45 fs laser pulse irradiation with a frequency doubled Ti: Sapphire laser. By varying the beam spot, the intensity on target was varied from 10(15) W/cm(2) to 10(19) W/cm(2). At best focus, low density "smoked" Ti targets yield similar to 20 times more He-alpha than the foil targets when irradiated at an angle of 45 degrees with s-polarized pulses. The duration of He-alpha emission from smoked targets, measured with a fast streak camera, was similar to that from Ti foils

Imprints of Nuclear Symmetry Energy on Properties of Neutron Stars

Significant progress has been made in recent years in constraining the density dependence of nuclear symmetry energy using terrestrial nuclear laboratory data. Around and below the nuclear matter saturation density, the experimental constraints start to merge in a relatively narrow region. At supra-saturation densities, there are, however, still large uncertainties. After summarizing the latest experimental constraints on the density dependence of nuclear symmetry energy, we highlight a few recent studies examining imprints of nuclear symmetry energy on the binding energy, energy release during hadron-quark phase transitions as well as the $w$-mode frequency and damping time of gravitational wave emission of neutron stars.Comment: 10 pages. Invited talk given in the Nuclear Astrophysics session of INPC2010, July 4-9, 2010, Vancouver, Canada; Journal of Physics: Conference Series (2011