The 20 February 2010 Madeira flash-floods: synoptic analysis and extreme rainfall assessment

This study aims to characterise the rainfall exceptionality and the meteorological context of the 20 February 2010 flash-floods in Madeira (Portugal). Daily and hourly precipitation records from the available rain-gauge station networks are evaluated in order to reconstitute the temporal evolution of the rainstorm, as its geographic incidence, contributing to understand the flash-flood dynamics and the type and spatial distribution of the associated impacts. The exceptionality of the rainstorm is further confirmed by the return period associated with the daily precipitation registered at the two long-term record stations, with 146.9 mm observed in the city of Funchal and 333.8 mm on the mountain top, corresponding to an estimated return period of approximately 290 yr and 90 yr, respectively. Furthermore, the synoptic associated situation responsible for the flash-floods is analysed using different sources of information, e.g., weather charts, reanalysis data, Meteosat images and radiosounding data, with the focus on two main issues: (1) the dynamical conditions that promoted such anomalous humidity availability over the Madeira region on 20 February 2010 and (2) the uplift mechanism that induced deep convection activity

Identificação do gene pccB A partir da varredura de uma biblioteca genômica de Corynebacterium pseudotuberculosis visando uma vacina contra linfadenite caseosa.

Corynebacterium pseudotuberculosis é o agente etiológico da linfadenite caseosa (LC), que acomete principalmente ovinos e caprinos. Esta doença é causadora de grandes problemas na ovinocaprinocultura. Diversas pesquisas tem sido realizadas na busca de uma vacina eficaz contra a LC. Estudos recentes utilizando um gene reporter em C. pseudotuberculosis, identificou a expressão do gene pccB (cadeia β da propionil CoA carboxilase) em macrófagos, indicando um possível envolvimento na virulência deste patógeno e um bom antígeno a ser explorado no desenvolvimento de uma nova estratégia vacinal. Como a sequência deste gene ainda não está disponível em banco de dados, o objetivo deste trabalho foi realizar varredura em uma biblioteca genômica de C. pseudotuberculosis para identificação completa da sequência do gene pccB. Uma sonda foi gerada a partir de um fragmento parcial do gene pccB marcado com [α32P]dCTP. A biblioteca genômica foi plaqueada em placas de lise para obter 2X103 pfu/placa e em seguida transferida para membranas de nylon previamente tratadas com soluções desnaturante, neutralizante e de pré-hibridização, a fim de, posteriormente, reagir com a sonda radioativa seguido da exposição das membranas a um filme de raio X. Dois clones positivos foram isolados e utilizados como template em reação de PCR, utilizando primers específicos da biblioteca genômica, gerando produtos de 3 Kb que foram sequenciados e analisados por BlastX, verificando-se 82% de identidade com o gene pccB2 de C. diphtheriae. Acreditando que haja sintenia entre as duas espécies mencionadas, foram desenhados primers com genes que flanqueiam o gene pccB2 de C. diphtheriae. Esses foram utilizados como iniciadores em reação de PCR, tendo como molde o DNA genômico de C. Pseudotuberculosis, gerando um fragmento de 2,1 Kb que foi clonado no vetor pGEM-T easy, sequenciado e analisado por BlastX. Resultados preliminares indicam que novos primers precisam ser desenhados para concluir a sequência deste gene

Invasion of exotic earthworms into ecosystems inhabited by native earthworms

The most conspicuous biological invasions in terrestrial ecosystems have been by exotic plants, insects and vertebrates. Invasions by exotic earthworms, although not as well studied, may be increasing with global commerce in agriculture, waste management and bioremediation. A number of cases has documented where invasive earthworms have caused significant changes in soil profiles, nutrient and organic matter dynamics, other soil organisms or plant communities. Most of these cases are in areas that have been disturbed (e.g., agricultural systems) or were previously devoid of earthworms (e.g., north of Pleistocene glacial margins). It is not clear that such effects are common in ecosystems inhabited by native earthworms, especially where soils are undisturbed. We explore the idea that indigenous earthworm fauna and/or characteristics of their native habitats may resist invasion by exotic earthworms and thereby reduce the impact of exotic species on soil processes. We review data and case studies from temperate and tropical regions to test this idea. Specifically, we address the following questions: Is disturbance a prerequisite to invasion by exotic earthworms? What are the mechanisms by which exotic earthworms may succeed or fail to invade habitats occupied by native earthworms? Potential mechanisms could include (1) intensity of propagule pressure (how frequently and at what densities have exotic species been introduced and has there been adequate time for proliferation?); (2) degree of habitat matching (once introduced, are exotic species faced with unsuitable habitat conditions, unavailable resources, or unsuited feeding strategies?); and (3) degree of biotic resistance (after introduction into an otherwise suitable habitat, are exotic species exposed to biological barriers such as predation or parasitism, ‘‘unfamiliar’’ microflora, or competition by resident native species?). Once established, do exotic species coexist with native species, or are the natives eventually excluded? Do exotic species impact soil processes differently in the presence or absence of native species? We conclude that (1) exotic earthworms do invade ecosystems inhabited by indigenous earthworms, even in the absence of obvious disturbance; (2) competitive exclusion of native earthworms by exotic earthworms is not easily demonstrated and, in fact, co-existence of native and exotic species appears to be common, even if transient; and (3) resistance to exotic earthworm invasions, if it occurs, may be more a function of physical and chemical characteristics of a habitat than of biological interactions between native and exotic earthworms

Protocolo para extração de RNA de plantas nativas do bioma cerrado e amazônico.

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Validação da estratégia de silenciamento gênico visando indução de resistência a Meloidogyne incognita e Heterodera glycines em soja GM.

Nematoides parasitas de plantas representam o maior estresse biótico da agricultura, causando perdas anuais maiores que US$ 100 bilhões. Baseado nas limitações dos métodos de atuais de controle, o desenvolvimento de novas estratégias deve ser uma prioridade. Recentemente, a estratégia de silenciamento gênico, por interferência mediada por RNA dupla fita, tem-se mostrado muito promissora para o controle de nematoides. Nesse trabalho foi inserida em embriões de soja, pela técnica de biobalística, uma construção de RNAi correspondente a uma fusão de regiões de dois genes que codificam para fatores de processamento de mRNA de Heterodera glycines e Meloidogyne incognita, visando a obtenção de eventos de soja GM resistentes à esses fitonematoides. Para averiguar o efeito do silenciamento, 6 eventos GM foram desafiados com M. incognita. Seis semanas após a inoculação, as raízes das plantas foram avaliadas quanto à indução de resistência. Quando comparados ao tratamento controle, os eventos transgênicos mostraram uma redução signiricativa entre 71% a 92% no número de ovos por grama de raiz. Os eventos transgênicos não foram estatisticamente diferentes quando comparados entre si, exceto o evento GmFSMiHg ? 4IT3. Trabalhos publicados até o momento demonstram silenciamento in planta de 12 genes-alvo de Meloidogyne spp. ou Heterodera spp., resultando em redução de nematoides estabelecidos, fêmeas em desenvolvimento e/ou número de ovos de 68-95% em relação ao controle. Os resultados aqui apresentados mostram claramente a capacidade da soja transgênica em reduzir o potencial reprodutivo de M. incognita por meio de silenciamento gênico. A completa redução de M. incognita continua a ser o objetivo final, mas a redução parcial, como observado no bioensaio, pode ter aplicações importantes no controle de NFGs

Attenuation of particulate organic carbon flux in the Scotia Sea, Southern Ocean, is controlled by zooplankton fecal pellets

The Southern Ocean (SO) is an important CO2 reservoir, some of which enters via the production, sinking and remineralization of organic matter. Recent work suggests the fraction of production that sinks is inversely related to production in the SO, a suggestion we confirm from 20 stations in the Scotia Sea. The efficiency with which exported material is transferred to depth (transfer efficiency) is believed to be low in high latitude systems. However, our estimates of transfer efficiency are bimodal, with stations in the seasonal ice zone showing intense losses and others displaying increases in flux with depth. Zooplankton fecal pellets dominated organic carbon flux and at stations with transfer efficiency >100 % fecal pellets were brown, indicative of fresh phytodetritus. We suggest that active flux mediated by zooplankton vertical migration and the presence of sea ice regulate the transfer of organic carbon into the oceans interior in the Southern Ocean

ESPRESSO: The next European exoplanet hunter

The acronym ESPRESSO stems for Echelle SPectrograph for Rocky Exoplanets and Stable Spectroscopic Observations; this instrument will be the next VLT high resolution spectrograph. The spectrograph will be installed at the Combined-Coud\'e Laboratory of the VLT and linked to the four 8.2 m Unit Telescopes (UT) through four optical Coud\'e trains. ESPRESSO will combine efficiency and extreme spectroscopic precision. ESPRESSO is foreseen to achieve a gain of two magnitudes with respect to its predecessor HARPS, and to improve the instrumental radial-velocity precision to reach the 10 cm/s level. It can be operated either with a single UT or with up to four UTs, enabling an additional gain in the latter mode. The incoherent combination of four telescopes and the extreme precision requirements called for many innovative design solutions while ensuring the technical heritage of the successful HARPS experience. ESPRESSO will allow to explore new frontiers in most domains of astrophysics that require precision and sensitivity. The main scientific drivers are the search and characterization of rocky exoplanets in the habitable zone of quiet, nearby G to M-dwarfs and the analysis of the variability of fundamental physical constants. The project passed the final design review in May 2013 and entered the manufacturing phase. ESPRESSO will be installed at the Paranal Observatory in 2016 and its operation is planned to start by the end of the same year.Comment: 12 pages, figures included, accepted for publication in Astron. Nach