Modeling the coupling of ocean ecology and biogeochemistry

We examine the interplay between ecology and biogeochemical cycles in the context of a global three-dimensional ocean model where self-assembling phytoplankton communities emerge from a wide set of potentially viable cell types. We consider the complex model solutions in the light of resource competition theory. The emergent community structures and ecological regimes vary across different physical environments in the model ocean: Strongly seasonal, high-nutrient regions are dominated by fast growing bloom specialists, while stable, low-seasonality regions are dominated by organisms that can grow at low nutrient concentrations and are suited to oligotrophic conditions. In the latter regions, the framework of resource competition theory provides a useful qualitative and quantitative diagnostic tool with which to interpret the outcome of competition between model organisms, their regulation of the resource environment, and the sensitivity of the system to changes in key physiological characteristics of the cells.Gordon and Betty Moore FoundationNational Science Foundation (U.S.

The solubility pump of carbon in the subtropical gyre of the North Atlantic

The subduction of carbon is examined using abiotic models of the solubility pump in the subtropical gyre of the North Atlantic. The importance of the seasonal cycle of the mixed layer, and advection of carbon, is examined using sensitivity experiments with a Lagrangian model of the carbon system. The rate of subduction of carbon is found to be strongly influenced by the gradients in mixed-layer thickness over the gyre and, to a lesser extent, modified by the end of winter bias in the properties of subducted fluid. A seasonally-cycling geochemical model of the carbon system is then developed for the North Atlantic. The model is diagnosed to examine the seasonal exchange in carbon between the atmosphere and ocean induced by the seasonal warming and cooling. There is a net annual air-sea flux of carbon into the subtropical gyre of the model due to undersaturation of pco2 with respect to the local equilibrium with the atmosphere. The undersaturation is due to advection of carbon by the circulation. Along the path of the Gulf Stream, northward advection and cooling of the low latitude waters is so rapid that the surface waters are significantly undersaturated in carbon. Due to its long equilibration period, there is a resultant air-sea flux of carbon dioxide over the northern flank and interior of the subtropical gyre. Warm, low carbon water from the tropics is fluxed into the southern flank of the subtropical gyre in the Ekman layer, inducing an oceanic uptake of carbon there. The model experiments suggest that it is necessary to account for advection to close the carbon budget in the observed time-series measurements at Bermuda

Dissolution of calcium carbonate: observations and model results in the North Atlantic

International audienceWe investigate the significance of in situ dissolution of calcium carbonate above its saturation horizons. The study relies on observations from the open subpolar North Atlantic [sNA] and on a 3-D biogeochemical model. The sNA is particularly well suited for observation-based detections of in situ, i.e. shallow depth CaCO3 dissolution [SDCCD] as it is a region of high CaCO3 production, deep CaCO3 saturation horizons, and precisely-defined pre-formed alkalinity. Based on the analysis of a comprehensive alkalinity data set we find that SDCCD does not appear to be a significant process in the open sNA. The results from the model support the observational findings and do not indicate a significant need of SDCCD to explain observed patterns of alkalinity in the North Atlantic. Instead our investigation points to the importance of mixing processes for the redistribution of alkalinity from dissolution of CaCO3 from below its saturation horizons. However, mixing has recently been neglected for a number of studies that called for SDCCD in the sNA and on global scale

Dissolution of calcium carbonate: observations and model results in the subpolar North Atlantic

We investigate the significance of in situ dissolution of calcium carbonate above its saturation horizons using observations from the open subpolar North Atlantic [sNA] and to a lesser extent a 3-D biogeochemical model. The sNA is particularly well suited for observation-based detections of in situ, i.e. shallow-depth CaCO3 dissolution [SDCCD] as it is a region of high CaCO3 production, deep CaCO3 saturation horizons, and precisely-defined pre-formed alkalinity. Based on the analysis of a comprehensive alkalinity data set we find that SDCCD does not appear to be a significant process in the open sNA. The results from the model support the observational findings by indicating that there is not a significant need of SDCCD to explain observed patterns of alkalinity in the North Atlantic. Instead our investigation points to the importance of mixing processes for the redistribution of alkalinity from dissolution of CaCO3 from below its saturation horizons. However, mixing has recently been neglected for a number of studies that called for SDCCD in the sNA and on global scale

Marine Virus-Like Particles and Microbes: A Linear Interpretation

Viruses are key players in ocean ecology and biogeochemistry, not only because of their functional roles but also partially due to their sheer abundance (Fuhrman, 1999; Wilhelm and Suttle, 1999). Because viruses cannot replicate without their hosts’ machinery, their abundance is inextricably related to that of their (mostly microbial) hosts. The relationship between viral and microbial abundances is thus of great interest

Local charge compensation from colour preconfinement as a key to the dynamics of hadronization

If, as is commonly accepted, the colour-singlet, `preconfined', perturbative clusters are the primary units of hadronization, then the electric charge is necessarily compensated locally at the scale of the typical cluster mass. As a result, the minijet electric charge is suppressed at scales that are greater than the cluster mass. We hence argue, and demonstrate by means of Monte Carlo simulations using HERWIG, that the scale at which charge compensation is violated is close to the mass of the clusters involved in hadronization, and its measurement would provide a clue to resolving the nature of the dynamics. We repeat the calculation using PYTHIA and find that the numbers produced by the two generators are similar. The cluster mass distribution is sensitive to soft emission that is considered unresolved in the parton shower phase. We discuss how the description of the splitting of large clusters in terms of unresolved emission modifies the algorithm of HERWIG, and relate the findings to the yet unknown underlying nonperturbative mechanism. In particular, we propose a form of $\alpha_S$ that follows from a power-enhanced beta function, and discuss how this $\alpha_S$ that governs unresolved emission may be related to power corrections. Our findings are in agreement with experimental data.Comment: 37 pages, 20 figure

Quantifying the drivers of ocean-atmosphere CO2 fluxes

A mechanistic framework for quantitatively mapping the regional drivers of air-sea CO2 fluxes at a global scale is developed. The framework evaluates the interplay between (1) surface heat and freshwater fluxes that influence the potential saturated carbon concentration, which depends on changes in sea surface temperature, salinity and alkalinity, (2) a residual, disequilibrium flux influenced by upwelling and entrainment of remineralized carbon- and nutrient-rich waters from the ocean interior, as well as rapid subduction of surface waters, (3) carbon uptake and export by biological activity as both soft tissue and carbonate, and (4) the effect on surface carbon concentrations due to freshwater precipitation or evaporation. In a steady state simulation of a coarse-resolution ocean circulation and biogeochemistry model, the sum of the individually determined components is close to the known total flux of the simulation. The leading order balance, identified in different dynamical regimes, is between the CO2 fluxes driven by surface heat fluxes and a combination of biologically driven carbon uptake and disequilibrium-driven carbon outgassing. The framework is still able to reconstruct simulated fluxes when evaluated using monthly averaged data and takes a form that can be applied consistently in models of different complexity and observations of the ocean. In this way, the framework may reveal differences in the balance of drivers acting across an ensemble of climate model simulations or be applied to an analysis and interpretation of the observed, real-world air-sea flux of CO2