2,236 research outputs found
Evaluating the contribution of the unexplored photochemistry of aldehydes on the tropospheric levels of molecular hydrogen (H2)
Molecular hydrogen, H2, is one of the most abundant trace gases in the atmosphere. The main known chemical source of H2 in the atmosphere is the photolysis of formaldehyde and glyoxal. Recent laboratory measurements and ground-state photochemistry calculations have shown other aldehydes photodissociate to yield H2 as well. This aldehyde photochemistry has not been previously accounted for in atmospheric H2 models. Here, we used two atmospheric models to test the implications of the previously unexplored aldehyde photochemistry on the H2 tropospheric budget. We used the AtChem box model implementing the nearly chemically explicit Master Chemical Mechanism at three sites selected to represent variable atmospheric environments: London, Cabo Verde and Borneo. We conducted five box model simulations per site using varying quantum yields for the photolysis of 16 aldehydes and compared the results against a baseline. The box model simulations showed that the photolysis of acetaldehyde, propanal, methylglyoxal, glycolaldehyde and methacrolein yields the highest chemical production of H2. We also used the GEOS-Chem 3-D atmospheric chemical transport model to test the impacts of the new photolytic H2 source on the global scale. A new H2 simulation capability was developed in GEOS-Chem and evaluated for 2015 and 2016. We then performed a sensitivity simulation in which the photolysis reactions of six aldehyde species were modified to include a 1 % yield of H2. We found an increase in the chemical production of H2 over tropical regions where high abundance of isoprene results in the secondary generation of methylglyoxal, glycolaldehyde and methacrolein, ultimately yielding H2. We calculated a final increase of 0.4 Tg yr-1 in the global chemical production budget, compared to a baseline production of ∼41 Tg yr-1. Ultimately, both models showed that H2 production from the newly discovered photolysis of aldehydes leads to only minor changes in the atmospheric mixing ratios of H2, at least for the aldehydes tested here when assuming a 1 % quantum yield across all wavelengths. Our results imply that the previously missing photochemical source is a less significant source of model uncertainty than other components of the H2 budget, including emissions and soil uptake. Copyright
The fallacy of enrolling only high-risk subjects in cancer prevention trials: Is there a "free lunch"?
BACKGROUND: There is a common belief that most cancer prevention trials should be restricted to high-risk subjects in order to increase statistical power. This strategy is appropriate if the ultimate target population is subjects at the same high-risk. However if the target population is the general population, three assumptions may underlie the decision to enroll high-risk subject instead of average-risk subjects from the general population: higher statistical power for the same sample size, lower costs for the same power and type I error, and a correct ratio of benefits to harms. We critically investigate the plausibility of these assumptions. METHODS: We considered each assumption in the context of a simple example. We investigated statistical power for fixed sample size when the investigators assume that relative risk is invariant over risk group, but when, in reality, risk difference is invariant over risk groups. We investigated possible costs when a trial of high-risk subjects has the same power and type I error as a larger trial of average-risk subjects from the general population. We investigated the ratios of benefit to harms when extrapolating from high-risk to average-risk subjects. RESULTS: Appearances here are misleading. First, the increase in statistical power with a trial of high-risk subjects rather than the same number of average-risk subjects from the general population assumes that the relative risk is the same for high-risk and average-risk subjects. However, if the absolute risk difference rather than the relative risk were the same, the power can be less with the high-risk subjects. In the analysis of data from a cancer prevention trial, we found that invariance of absolute risk difference over risk groups was nearly as plausible as invariance of relative risk over risk groups. Therefore a priori assumptions of constant relative risk across risk groups are not robust, limiting extrapolation of estimates of benefit to the general population. Second, a trial of high-risk subjects may cost more than a larger trial of average risk subjects with the same power and type I error because of additional recruitment and diagnostic testing to identify high-risk subjects. Third, the ratio of benefits to harms may be more favorable in high-risk persons than in average-risk persons in the general population, which means that extrapolating this ratio to the general population would be misleading. Thus there is no free lunch when using a trial of high-risk subjects to extrapolate results to the general population. CONCLUSION: Unless the intervention is targeted to only high-risk subjects, cancer prevention trials should be implemented in the general population
Metal-insulator transition in vanadium dioxide nanobeams: probing sub-domain properties of strongly correlated materials
Many strongly correlated electronic materials, including high-temperature
superconductors, colossal magnetoresistance and metal-insulator-transition
(MIT) materials, are inhomogeneous on a microscopic scale as a result of domain
structure or compositional variations. An important potential advantage of
nanoscale samples is that they exhibit the homogeneous properties, which can
differ greatly from those of the bulk. We demonstrate this principle using
vanadium dioxide, which has domain structure associated with its dramatic MIT
at 68 degrees C. Our studies of single-domain vanadium dioxide nanobeams reveal
new aspects of this famous MIT, including supercooling of the metallic phase by
50 degrees C; an activation energy in the insulating phase consistent with the
optical gap; and a connection between the transition and the equilibrium
carrier density in the insulating phase. Our devices also provide a
nanomechanical method of determining the transition temperature, enable
measurements on individual metal-insulator interphase walls, and allow general
investigations of a phase transition in quasi-one-dimensional geometry.Comment: 9 pages, 3 figures, original submitted in June 200
Random walk with barriers: Diffusion restricted by permeable membranes
Restrictions to molecular motion by barriers (membranes) are ubiquitous in
biological tissues, porous media and composite materials. A major challenge is
to characterize the microstructure of a material or an organism
nondestructively using a bulk transport measurement. Here we demonstrate how
the long-range structural correlations introduced by permeable membranes give
rise to distinct features of transport. We consider Brownian motion restricted
by randomly placed and oriented permeable membranes and focus on the
disorder-averaged diffusion propagator using a scattering approach. The
renormalization group solution reveals a scaling behavior of the diffusion
coefficient for large times, with a characteristically slow inverse square root
time dependence. The predicted time dependence of the diffusion coefficient
agrees well with Monte Carlo simulations in two dimensions. Our results can be
used to identify permeable membranes as restrictions to transport in disordered
materials and in biological tissues, and to quantify their permeability and
surface area.Comment: 8 pages, 3 figures; origin of dispersion clarified, refs adde
Powerlaw optical conductivity with a constant phase angle in high Tc superconductors
In certain materials with strong electron correlations a quantum phase
transition (QPT) at zero temperature can occur, in the proximity of which a
quantum critical state of matter has been anticipated. This possibility has
recently attracted much attention because the response of such a state of
matter is expected to follow universal patterns defined by the quantum
mechanical nature of the fluctuations. Forementioned universality manifests
itself through power-law behaviours of the response functions. Candidates are
found both in heavy fermion systems and in the cuprate high Tc superconductors.
Although there are indications for quantum criticality in the cuprate
superconductors, the reality and the physical nature of such a QPT are still
under debate. Here we identify a universal behaviour of the phase angle of the
frequency dependent conductivity that is characteristic of the quantum critical
region. We demonstrate that the experimentally measured phase angle agrees
precisely with the exponent of the optical conductivity. This points towards a
QPT in the cuprates close to optimal doping, although of an unconventional
kind.Comment: pdf format, 9 pages, 4 color figures include
Phase-slip induced dissipation in an atomic Bose-Hubbard system
Phase slips play a primary role in dissipation across a wide spectrum of
bosonic systems, from determining the critical velocity of superfluid helium to
generating resistance in thin superconducting wires. This subject has also
inspired much technological interest, largely motivated by applications
involving nanoscale superconducting circuit elements, e.g., standards based on
quantum phase-slip junctions. While phase slips caused by thermal fluctuations
at high temperatures are well understood, controversy remains over the role of
phase slips in small-scale superconductors. In solids, problems such as
uncontrolled noise sources and disorder complicate the study and application of
phase slips. Here we show that phase slips can lead to dissipation for a clean
and well-characterized Bose-Hubbard (BH) system by experimentally studying
transport using ultra-cold atoms trapped in an optical lattice. In contrast to
previous work, we explore a low velocity regime described by the 3D BH model
which is not affected by instabilities, and we measure the effect of
temperature on the dissipation strength. We show that the damping rate of
atomic motion-the analogue of electrical resistance in a solid-in the confining
parabolic potential fits well to a model that includes finite damping at zero
temperature. The low-temperature behaviour is consistent with the theory of
quantum tunnelling of phase slips, while at higher temperatures a cross-over
consistent with the transition to thermal activation of phase slips is evident.
Motion-induced features reminiscent of vortices and vortex rings associated
with phase slips are also observed in time-of-flight imaging.Comment: published in Nature 453, 76 (2008
Physiological Indicators for User Trust in Machine Learning with Influence Enhanced Fact-Checking
© IFIP International Federation for Information Processing 2019. Trustworthy Machine Learning (ML) is one of significant challenges of “black-box” ML for its wide impact on practical applications. This paper investigates the effects of presentation of influence of training data points on machine learning predictions to boost user trust. A framework of fact-checking for boosting user trust is proposed in a predictive decision making scenario to allow users to interactively check the training data points with different influences on the prediction by using parallel coordinates based visualization. This work also investigates the feasibility of physiological signals such as Galvanic Skin Response (GSR) and Blood Volume Pulse (BVP) as indicators for user trust in predictive decision making. A user study found that the presentation of influences of training data points significantly increases the user trust in predictions, but only for training data points with higher influence values under the high model performance condition, where users can justify their actions with more similar facts to the testing data point. The physiological signal analysis showed that GSR and BVP features correlate to user trust under different influence and model performance conditions. These findings suggest that physiological indicators can be integrated into the user interface of AI applications to automatically communicate user trust variations in predictive decision making
Placental syncytiotrophoblast constitutes a major barrier to vertical transmission of Listeria monocytogenes.
Listeria monocytogenes is an important cause of maternal-fetal infections and serves as a model organism to study these important but poorly understood events. L. monocytogenes can infect non-phagocytic cells by two means: direct invasion and cell-to-cell spread. The relative contribution of each method to placental infection is controversial, as is the anatomical site of invasion. Here, we report for the first time the use of first trimester placental organ cultures to quantitatively analyze L. monocytogenes infection of the human placenta. Contrary to previous reports, we found that the syncytiotrophoblast, which constitutes most of the placental surface and is bathed in maternal blood, was highly resistant to L. monocytogenes infection by either internalin-mediated invasion or cell-to-cell spread. Instead, extravillous cytotrophoblasts-which anchor the placenta in the decidua (uterine lining) and abundantly express E-cadherin-served as the primary portal of entry for L. monocytogenes from both extracellular and intracellular compartments. Subsequent bacterial dissemination to the villous stroma, where fetal capillaries are found, was hampered by further cellular and histological barriers. Our study suggests the placenta has evolved multiple mechanisms to resist pathogen infection, especially from maternal blood. These findings provide a novel explanation why almost all placental pathogens have intracellular life cycles: they may need maternal cells to reach the decidua and infect the placenta
Quantum phase transitions of light
Recently, condensed matter and atomic experiments have reached a length-scale
and temperature regime where new quantum collective phenomena emerge. Finding
such physics in systems of photons, however, is problematic, as photons
typically do not interact with each other and can be created or destroyed at
will. Here, we introduce a physical system of photons that exhibits strongly
correlated dynamics on a meso-scale. By adding photons to a two-dimensional
array of coupled optical cavities each containing a single two-level atom in
the photon-blockade regime, we form dressed states, or polaritons, that are
both long-lived and strongly interacting. Our zero temperature results predict
that this photonic system will undergo a characteristic Mott insulator
(excitations localised on each site) to superfluid (excitations delocalised
across the lattice) quantum phase transition. Each cavity's impressive photon
out-coupling potential may lead to actual devices based on these quantum
many-body effects, as well as observable, tunable quantum simulators. We
explicitly show that such phenomena may be observable in micro-machined diamond
containing nitrogen-vacancy colour centres and superconducting microwave
strip-line resonators.Comment: 11 pages, 5 figures (2 in colour
Beyond Volume: The Impact of Complex Healthcare Data on the Machine Learning Pipeline
From medical charts to national census, healthcare has traditionally operated
under a paper-based paradigm. However, the past decade has marked a long and
arduous transformation bringing healthcare into the digital age. Ranging from
electronic health records, to digitized imaging and laboratory reports, to
public health datasets, today, healthcare now generates an incredible amount of
digital information. Such a wealth of data presents an exciting opportunity for
integrated machine learning solutions to address problems across multiple
facets of healthcare practice and administration. Unfortunately, the ability to
derive accurate and informative insights requires more than the ability to
execute machine learning models. Rather, a deeper understanding of the data on
which the models are run is imperative for their success. While a significant
effort has been undertaken to develop models able to process the volume of data
obtained during the analysis of millions of digitalized patient records, it is
important to remember that volume represents only one aspect of the data. In
fact, drawing on data from an increasingly diverse set of sources, healthcare
data presents an incredibly complex set of attributes that must be accounted
for throughout the machine learning pipeline. This chapter focuses on
highlighting such challenges, and is broken down into three distinct
components, each representing a phase of the pipeline. We begin with attributes
of the data accounted for during preprocessing, then move to considerations
during model building, and end with challenges to the interpretation of model
output. For each component, we present a discussion around data as it relates
to the healthcare domain and offer insight into the challenges each may impose
on the efficiency of machine learning techniques.Comment: Healthcare Informatics, Machine Learning, Knowledge Discovery: 20
Pages, 1 Figur
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