Two exchange-correlation functionals compared for first-principles liquid water

The first-principles description of liquid water using ab initio molecular dynamics (AIMD) based on Density Functional theory (DFT) has recently been found to require long equilibration times, giving too low diffusivities and a clear over-structuring of the liquid. In the light of these findings we compare here the room-temperature description offered by two different exchange correlation functionals: BLYP, the most popular for liquid water so far, and RPBE, a revision of the widely used PBE. We find for RPBE a less structured liquid with radial distribution functions closer to the experimental ones than the ones of BLYP. The diffusivity obtained with RPBE for heavy water is still 20% lower than the corresponding experimental value, but it represents a substantial improvement on the BLYP value, one order of magnitude lower than experiment. These characteristics and the hydrogen-bond (HB) network imperfection point to an effective temperature ~3% lower than the actual simulation temperature for the RPBE liquid, as compared with BLYP's ~17% deviation. The too long O--O average nearest-neighbor distance observed points to an excessively weak HB, possibly compensating more fundamental errors in the DFT description.Comment: Jorunal reference adde

Density-driven structural transformations in B2O3 glass

The method of in situ high-pressure neutron diffraction is used to investigate the structure of B2O3 glass on compression in the range from ambient to 17.5(5) GPa. The experimental results are supplemented by molecular dynamics simulations made using a newly developed aspherical ion model. The results tie together those obtained from other experimental techniques to reveal three densification regimes. In the first, BO3 triangles are the predominant structural motifs as the pressure is increased from ambient to 6.3(5) GPa, but there is an alteration to the intermediate range order which is associated with the dissolution of boroxol rings. In the second, BO4 motifs replace BO3 triangles at pressures beyond 6.3 GPa and the dissolution of boroxol rings continues until it is completed at 11–14 GPa. In the third, the B-O coordination number continues to increase with pressure to give a predominantly tetrahedral glass, a process that is completed at a pressure in excess of 22.5 GPa. On recovery of the glass to ambient from a pressure of 8.2 GPa, triangular BO3 motifs are recovered but, relative to the uncompressed material, there is a change to the intermediate range order. The comparison between experiment and simulation shows that the aspherical ion model is able to provide results of unprecedented accuracy at pressures up to at least 10 GPa

Liquid structure of Rb-Hg alloys studied by neutron diffraction

The structures of liquid Rb–Hg alloys were studied as a function of composition by neutron diffraction. In the intermediate Rb concentration range, the obtained structure factors show a small prepeak, which may be an evidence of the formation of Hg polyanion units in liquids. The Reverse Monte Carlo (RMC) analysis was applied to separate the total radial distribution function into the corresponding partial radial distribution functions. Up to 10 at.% Rb, no obvious changes are found for the first peak position of the partial radial distribution functions of the Hg–Hg pair and that of the Hg–Rb pair. The first peak position between the Hg–Rb pairs increases above 20 at.% Rb. In addition to the first peak, a subpeak between Hg–Hg pairs can be seen in the large distance. At 60 at.% Rb, the nearest neighbor distance between Hg atoms shows the closest value in the concentration range studied. These results indicate that with the progress of charge transfer the solvation structure in the dilute Rb concentration range changes into the structure containing polyanions composed of Hg species

Van der Waals effects in ab initio water at ambient and supercritical conditions

Density functional theory (DFT) within the generalized gradient approximation (GGA) is known to poorly reproduce the experimental properties of liquid water. The poor description of the dispersion forces in the exchange correlation functionals is one of the possible causes. Recent studies have demonstrated an improvement in the simulated properties when they are taken into account. We present here a study of the effects on liquid water of the recently proposed semi-empirical correction of Grimme et al. J. Chem. Phys. 132, 154104 (2010)]. The difference between standard and corrected DFT-GGA simulations is rationalized with a detailed analysis upon modifying an accurate parameterised potential. This allows an estimate of the typical range of dispersion forces in water. We also show that the structure and diffusivity of ambient-like liquid water are sensitive to the fifth neighbor position, thus highlighting the key role played by this neighbor. Our study is extended to water at supercritical conditions, where experimental and theoretical results are much more scarce. We show that the semi-empirical correction by Grimme et al. improves significantly, although somewhat counter-intuitively, both the structural and the dynamical description of supercritical water

The environment of transition elements in oxide glasses

International audienc

Experimental transplantation of Posidonia oceanica

peer reviewedThe project of extension at sea of Monaco required the realization of important environmental measures to protect the marine environment. Among differents actions was included a significant experimental measure of transplantation of nearly 500 m2 of Posidonia oceanica located in the project area. To reach this objective we have developed and implemented the SafeBent protocol. The SafeBent protocol allows to sample clods of seagrasses (0.8 m2/60 cm thick) with a marinized transplanter (Model Optimal 880) operated with a very long arm shovel (27 m) from a jackup. The main advantages of this method are:-high transplantation rate (up to 32 m2/jour);-conservation of the structure of the seagrasses in meadows;- conservation of the sediment;-easy transport of clods in specially manufactured metal baskets The transplantation was carried out between 20 March and 15 May 2017. Seagrasses were reimplanted in the ground of the AMP of Larvotto (384 m2) and on the berm of the dam along the port of Fontvieille in specially constructed concrete planters (116 m2). The present communication aims to present the Safebent method and the results obtained to date

Two exchange-correlation functionals compared for first-principles liquid water

The first-principles description of liquid water using ab initio molecular dynamics (AIMD) based on density functional theory (DFT) has recently been found to require long equilibration times, giving too low diffusivities and a clear over-structuring of the liquid. In the light of these findings we compare here the room-temperature description offered by two different exchange correlation functionals: BLYP, the most popular for liquid water so far, and RPBE, a revision of the widely used PBE. We find for RPBE a less structured liquid with radial distribution functions closer to experiment ones than the ones of BLYP. The diffusivity obtained with RPBE for heavy water is still 20% lower than the corresponding experimental value, but it represents a substantial improvement on the BLYP value, one order of magnitude lower than experiment. These characteristics and the hydrogen-bond (HB) network imperfection point to an effective temperature ∼3% lower than the actual simulation temperature for the RPBE liquid, as compared with BLYP's ∼17% deviation. The too long O-O average nearest-neighbor distance observed points to an excessively weak HB, possibly compensating more fundamental errors in the DFT description

Amorphous-amorphous transformation at high pressure in gallo-germanosilicate tetrahedral network glasses

International audienceWe report the existence of structurally distinct amorphous states upon compression in sodium gallo- germanosilicate glasses. In situ x-ray absorption spectroscopy provides clear evidence for a transition at high pressure to a more compact arrangement of atoms based on Ga and Ge octahedral sites. This study extends previous works on simple and open tetrahedral network