The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides

Grapevine (Vitis vinifera L.) is a widely cultivated fruit crop whose growth and productivity are greatly affected by low temperatures. On the other hand, wild Vitis species represent valuable genetic resources of natural stress tolerance. We have isolated and characterized a MYB-like gene encoding a putative GARP-type transcription factor from Amur grape (V. amurensis) designated as VaAQUILO. AQUILO (AQ) is induced by cold in both V. amurensis and V. vinifera, and its overexpression results in significantly improved tolerance to cold both in transgenic Arabidopsis and in Amur grape calli. In Arabidopsis, the ectopic expression of VaAQ increased antioxidant enzyme activities and up-regulated reactive oxygen species- (ROS) scavenging-related genes. Comparative mRNA sequencing profiling of 35S:VaAQ Arabidopsis plants suggests that this transcription factor is related to phosphate homeostasis like their Arabidopsis closest homologues: AtHRS1 and AtHHO2. However, when a cold stress is imposed, AQ is tightly associated with the cold-responsive pathway and with the raffinose family oligosaccharides (RFOs), as observed by the up-regulation of galactinol synthase (GoLS) and raffinose synthase genes. Gene co-expression network (GCN) and cis-regulatory element (CRE) analyses in grapevine indicated AQ as potentially regulating VvGoLS genes. Increased RFO content was confirmed in both transgenic Arabidopsis and Amur grape calli overexpressing VaAQ. Taken together, our results imply that AQ improves cold tolerance through promoting the accumulation of osmoprotectants.This work was supported by the Youth Innovation Promotion Association of CAS (2015281), project funded by the China Postdoctoral Science Foundation (2016M601166), Science and Technology Service Network Initiative of CAS (KFJ-STS-ZDTP-025), and Grape Breeding Project of Ningxia (NXNYYZ201502)

The GARP/MYB-related grape transcription factor AQUILO improves cold tolerance and promotes the accumulation of raffinose family oligosaccharides

Grapevine (Vitis vinifera L.) is a widely cultivated fruit crop whose growth and productivity are greatly affected by low temperatures. On the other hand, wild Vitis species represent valuable genetic resources of natural stress tolerance. We have isolated and characterized a MYB-like gene encoding a putative GARP-type transcription factor from Amur grape (V. amurensis) designated as VaAQUILO. AQUILO (AQ) is induced by cold in both V. amurensis and V. vinifera, and its overexpression results in significantly improved tolerance to cold both in transgenic Arabidopsis and in Amur grape calli. In Arabidopsis, the ectopic expression of VaAQ increased antioxidant enzyme activities and up-regulated reactive oxygen species- (ROS) scavenging-related genes. Comparative mRNA sequencing profiling of 35S:VaAQ Arabidopsis plants suggests that this transcription factor is related to phosphate homeostasis like their Arabidopsis closest homologues: AtHRS1 and AtHHO2. However, when a cold stress is imposed, AQ is tightly associated with the cold-responsive pathway and with the raffinose family oligosaccharides (RFOs), as observed by the up-regulation of galactinol synthase (GoLS) and raffinose synthase genes. Gene co-expression network (GCN) and cis-regulatory element (CRE) analyses in grapevine indicated AQ as potentially regulating VvGoLS genes. Increased RFO content was confirmed in both transgenic Arabidopsis and Amur grape calli overexpressing VaAQ. Taken together, our results imply that AQ improves cold tolerance through promoting the accumulation of osmoprotectants

The 401–409 Ma Xiaodonggou granitic intrusion: implications for understanding the Devonian Tectonics of the Northwest China Altai orogen

<p>Palaeozoic granitoids in the Chinese Altai are important for understanding the evolution of the Central Asian Orogenic Belt (CAOB). The Xiaodonggou granitic intrusion, situated in the Chinese Altai (southern CAOB), is composed of two intrusive phases, medium-grained granite intruded by porphyritic granite. Zircon LA-ICP-MS U–Pb analyses of medium-grained granite and porphyritic granite yield ages of 409 ± 2 Ma and 400 ± 1 Ma, respectively, indicating that these formed in Early Devonian time. Medium-grained granite and porphyritic granite have similar geochemical features and Nd–Hf isotopic compositions. Arc-like geochemical characteristics (e.g. enrichment of LILEs and negative anomalies of Nb, Ta, Ti, and P) show that both phases are volcanic arc granites (VAGs). Geochemical and isotopic characteristics suggest that these magmas originated from melting older crust. Based on their near-zero or negative <i>ε</i>_Nd(<i>t</i>) values (−1.4to 0) and positive <i>ε</i>_Hf(<i>t</i>) values (+1.4 to +7.8), together with Nd model ages of 1.15–1.26 Ga and zircon Hf model ages of 0.90–1.30 Ga, we suggest that the Xiaodonggou granites were derived from a mixture of juvenile and old crustal components. Some other Devonian granitic intrusions were recently identified in the Chinese Altai with ages between 416 and 375 Ma. These Devonian granites have similar geochemical characteristics and petrogenesis as Xiaodonggou granites. The formation of these Devonian granites was in response to subduction processes, suggesting that Chinese Altai was an active continental margin in Early Devonian time.</p

Geochronology, geochemistry and petrogenesis of diabase dyke swarms in East Tianshan, Xinjiang, NW China

Diabase dyke swarms are widespread in the East Tianshan and Beishan regions. LA-ICP-MS zircon U-Pb ages of these diabase vary from 305 Ma to 278 Ma, showing that these dykes were formed during Late Carboniferous-Early Permian magmatism. All diabase samples are subalkali calc-alkali, characterized by slight LREE and LILEs enrichment, and weak negative Ti, Nb and Ta anomalies. The diabase samples have positive ε(Nd)(t) values (>+3), high Sr isotopic compositions (initial 87Sr/86Sr values=0.7030–0.7097), and large variation of Pb isotopic compositions, indicating they were derived from a deplete mantle source. Regional geology and geochemistry evidences indicate that these diabase dyke swarms were generated in a lithosphere extensional setting and had the same magma sources. Initial magmas may be a mixture of depleted asthenosphere mantle and enriched lithospheric mantle during rapid magma ascending

Effects of sunlight exclusion on the profiles of monoterpene biosynthesis and accumulation in grape exocarp and mesocarp

Terpenes are important aroma compounds in table Muscat grape and wine, and their content in the berry can be affected by sunlight. The effects of sunlight exclusion on monoterpene profiles and relevant gene expression profiles in the exocarp and mesocarp of table Muscat grape 'Jingxiangyu' at different development stages were thoroughly surveyed by bagging pre-veraison clusters in special opaque boxes. The responses of monoterpenes to sunlight treatments varied in three types, representatively linalool, ocimene and geraniol. Linalool was the most sensitive compound to sunlight, whose biosynthesis was severely inhibited by sunlight exclusion and then was elevated by re-exposure. Ocimene and glycosylated geraniol showed a certain suppressive and stimulative responses to sunlight exclusion respectively. Further transcription analysis revealed that VvPNLinNer1, VvCSbOci, VvGT7 and VvGT14 genes were mainly responsible for monoterpene accumulation and sensitivity to sunlight. VvDXS2 and VvDXR genes were partially related to the differential accumulation of total terpenes under different sunlight treatments. (C) 2017 Elsevier Ltd. All rights reserved

Genome-wide identification and characterization of the 14–3-3 family in Vitis vinifera L. during berry development and cold- and heat-stress response

Abstract Background The 14–3-3 family of ubiquitous proteins in eukaryotes plays important roles in the regulation of various plant biological processes. However, less information is known about this family in grape fruit. Results To investigate the characteristics and functions of 14–3-3 in grape, a total of 11 14–3-3 proteins were identified. Phylogenetic analysis of 14–3-3 proteins in grape (VviGRFs) with homologous proteins in Arabidopsis showed that these proteins were classified into two groups, namely, epsilon and non-epsilon groups. Epsilon group members commonly contained more introns and motifs than non-epsilon group, and some intron positions were found to be conserved between Vitis and Arabidopsis 14–3-3 genes. RNA-seq and qRT-PCR results indicated that VviGRF genes may be involved in the regulation of grape development and berry ripening. Moreover, six VviGRFs exhibited significantly up- or down-regulated expression in response to cold and heat stresses, thereby revealing their potential roles in the regulation of abiotic stress responses. Conclusions This work provides fundamental knowledge for further studies about the biological roles of VviGRFs in grape development and abiotic stress response. The present result will also be beneficial for understanding their molecular mechanisms and improving grape agricultural traits in the future

The inheritance of cold tolerance in seven interspecific grape populations

The interspecific cross is an important breeding strategy in grape breeding program. Vitis amurensis is a wild species native to China that can withstand extreme cold temperatures. In this study, we used seven populations of different combinations, and six of these populations are of Vitis amurensis pedigree. The low temperature exotherms (LTEs) were used to evaluate the cold tolerance of grapes, and the results indicated that the cold tolerance inheritance of V. amurensis is very strong and additive and the broad-sense heritability ranged from 0.54 to 0.71 in seven populations. The LTE values distributed in the progeny in a normal, continuous manner despite a wide range of variation, indicating that their presence and concentration is a quantitative trait, controlled by polygenes. In addition, evidence of transgressive inheritance was noted, indicated by the exceptionally high cold tolerance observed amongst some of the progenies. These results are of both practical and scientific interests for further breeding efforts and researches on different cold tolerance in grape

Geology, genesis, and geodynamic setting of Cihai: an Early Permian diabase-hosted skarn iron deposit in the eastern Tianshan, Northwest China

<p>Extensive Permian mafic–ultramafic intrusions crop out within the eastern Tianshan, southern part of Central Asian Orogenic Belt (CAOB). Most of these mafic–ultramafic complexes are associated with Cu-Ni-Co deposits. However, Cihai, located in the southern part of the eastern Tianshan, is a large Fe deposit hosted in the Early Permian mafic rocks. The mafic to intermediate rocks are composed of gabbro, diabase, and monzodiorite. Geological and geochemical characteristics suggest that their parental magmas might have been generated by interaction between the depleted asthenospheric mantle and the metasomatized lithospheric mantle. Iron ores of the Cihai iron deposit are hosted in the diabase, and all Fe–Ti oxides in the ore-hosted diabase are ilmenite, instead of magnetite as previously reported. Chondrite-normalized REE patterns show that the magnetite separates from disseminated, banded, and massive iron ores, which are distinct from those in magmatic Fe-Ti deposits. Geological and chemical features suggest that the main ore bodies in the Cihai iron deposit are of hydrothermal origin, rather than magmatic as previously suggested. Numerous other Early Permian mafic rocks were recently identified in the Tarim basin and the eastern Tianshan with ages between 301 and 269 Ma. The mafic rocks in the Tarim basin exhibit characteristics of Oceanic Island Basalt (OIB), whereas the mafic rocks in the eastern Tianshan show island arc basalt (IAB) affinity. In addition, the presence of skarn iron deposit instead of Fe–Ti oxide deposit in the eastern Tianshan during the Early Permian time also lends little support for a plume-related environment. These features, together with a lack of verified anomalous high-temperature magmas in the eastern Tianshan, suggest that the Permian Tarim mantle plume may not account for the formation of the mafic rocks in the eastern Tianshan area, and that the Tarim LIP does not extend to the eastern Tianshan area.</p

Additional file 8: of Genome-wide identification and characterization of the 14–3-3 family in Vitis vinifera L. during berry development and cold- and heat-stress response

Expression profile of 14–3-3 genes in V. vinifera cv. Muscat of Hamburg under cold stress from published data SRP018199. (DOC 28 kb

Genome-wide Identification and Classification of HSF Family in Grape, and Their Transcriptional Analysis under Heat Acclimation and Heat Stress

Heat stress is one of the most serious threats in viticulture. Heat shock transcription factors (HSFs) have been proven to be the most important transcriptional factor family in the plant response to heat. In this study, a total of 19 putative HSF genes (VHSFs) were identified from the 12 x Vitis vinifera Pinot Noir PN4002 genome, and their chromosomal location, phylogenetic tree, exon-intron structure and conserved motifs were also analyzed. In addition, these HSFs transcriptional profiles in Vitis vinifera 'Jingxiu' (weak heat tolerance) and Vitis davidii 'Tangwei' (strong heat tolerance) under heat stress (47 degrees C) and heat acclimation (38 degrees C) were presented. Only VHSF01, VHSF05, VHSF15 and VHSF18 among 19 VHSFs showed different transcriptional models in these two genotypes under the same treatment, suggesting that these four VHSFs may be important factors which result in a thermotolerance difference between lingxiu' and `Tangwei'. This study provides novel insights into the response of 19 VHSFs to heat stress in the grape and suggests that potential key VHSFs in grape thermotolerance have great implications for molecular breeding in grapes