652 research outputs found
Elastic precursor of the transformation from glycolipid-nanotube to -vesicle
By the combination of optical tweezer manipulation and digital video
microscopy, the flexural rigidity of single glycolipid "nano" tubes has been
measured below the transition temperature at which the lipid tubules are
transformed into vesicles. Consequently, we have found a clear reduction of the
rigidity obviously before the transition as temperature increasing. Further
experiments of infrared spectroscopy (FT-IR) and differential scanning
calorimetry (DSC) have suggested a microscopic change of the tube walls,
synchronizing with the precursory softening of the nanotubes.Comment: 9 pages, 6 figure
Safety and Short-Term Toxicity of a Novel Cationic Lipid Formulation for Human Gene Therapy
Overview summary Although several viral vectors have been widely applied to the treatment of human disease, the development of nonviral vectors is still in their infancy. In this report, a novel cationic lipid, DMRIE/DOPE, has been incorporated into the DNA–liposome formulation that improves transfection efficiencies and allows up to 1,000-fold higher concentrations of DNA to be administered in vivo. In this paper, the safety and toxicity of this formulation is described in two species, mice and pigs, suggesting that it may prove useful for human gene therapy.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/63224/1/hum.1993.4.6-781.pd
Atomistic Modeling of F-Actin Mechanical Responses and Determination of Mechanical Properties
A molecular structural mechanics (MSM) model was developed for F-actins in cells, where the force constants describing the monomer interaction were achieved using molecular dynamics simulations. The MSM was then employed to predict the mechanical properties of F-actin. The obtained Young’s modulus (1.92 GPa), torsional rigidity (2.36 × 10–26 Nm2), and flexural rigidity (10.84 × 10–26 Nm2) were found to be in good agreement with existing experimental data. Subsequently, the tension-induced bending was studied for F-actins as a result of their helical structure. Mechanical instability was also investigated for the actin filaments in filopodial protrusion by considering the reinforcing effect of the actin-binding proteins. The predicted buckling load agreed well with the experimentally obtained stall force, showing a pivotal role of the actin-binding protein in regulating the stiffness of F-actin bundles during the formation of filopodia protrusion. Herein, it is expected that the MSM model can be extended to the mechanics of more complex filamentous systems such as stress fibers and actin meshwork
Trapping and Wiggling: Elastohydrodynamics of Driven Microfilaments
We present a general theoretical analysis of semiflexible filaments subject
to viscous drag or point forcing. These are the relevant forces in dynamic
experiments designed to measure biopolymer bending moduli. By analogy with the
``Stokes problems" in hydrodynamics (fluid motion induced by that of a wall
bounding a viscous fluid), we consider the motion of a polymer one end of which
is moved in an impulsive or oscillatory way. Analytical solutions for the
time-dependent shapes of such moving polymers are obtained within an analysis
applicable to small-amplitude deformations. In the case of oscillatory driving,
particular attention is paid to a characteristic length determined by the
frequency of oscillation, the polymer persistence length, and the viscous drag
coefficient. Experiments on actin filaments manipulated with optical traps
confirm the scaling law predicted by the analysis and provide a new technique
for measuring the elastic bending modulus. A re-analysis of several published
experiments on microtubules is also presented.Comment: RevTex, 24 pages, 15 eps figs, uses cite.sty, Biophysical
Primary cilia respond to fluid shear stress and mediate flow-induced calcium deposition in osteoblasts
Bone turnover in vivo is regulated by mechanical forces such as shear stress originating from interstitial oscillatory fluid flow (OFF), and bone cells in vitro respond to mechanical loading. However, the mechanisms by which bone cells sense mechanical forces, resulting in increased mineral deposition, are not well understood. The aim of this study was to investigate the role of the primary cilium in mechanosensing by osteoblasts. MLO-A5 murine osteoblasts were cultured in monolayer and subjected to two different OFF regimens: 5 short (2 h daily) bouts of OFF followed by morphological analysis of primary cilia; or exposure to chloral hydrate to damage or remove primary cilia and 2 short bouts (2 h on consecutive days) of OFF. Primary cilia were shorter and there were fewer cilia per cell after exposure to periods of OFF compared with static controls. Damage or removal of primary cilia inhibited OFF-induced PGE2 release into the medium and mineral deposition, assayed by Alizarin red staining. We conclude that primary cilia are important mediators of OFF-induced mineral deposition, which has relevance for the design of bone tissue engineering strategies and may inform clinical treatments of bone disorders causes by load-deficiency.—Delaine-Smith, R. M., Sittichokechaiwut, A., Reilly, G. C. Primary cilia respond to fluid shear stress and mediate flow-induced calcium deposition in osteoblasts
Genomic Organization, Splice Variants and Expression of CGMl, a CD66-related Member of the Carcinoembryonic Antigen Gene Family
The tumor marker carcinoembryonic antigen (CEA) belongs to a family of proteins which are composed of one immunogiobulin variable domain and a varying number of immunoglobulin constant-like domains. Most of the membrane-bound members, which are anchored either by a glycosylphosphatidylinositol moiety or a transmembrane domain, have been shown to convey cell adhesion in vitro. Here we describe two splice variants of CGMI. a transmembrane member of the CEA family without immunoglobulin constant.like domains. CGM1a and CGM1c contain cytopiasmic domains of 71 and 31 amino acids, respectively, The cytoplasmic region of CGM1a is encoded by four exons (Cyt1-Cyt4). Differential splicing of the Cyt1 exon (53 bp)..
Structural Properties of the Sliding Columnar Phase in Layered Liquid Crystalline Systems
Under appropriate conditions, mixtures of cationic and neutral lipids and DNA
in water condense into complexes in which DNA strands form local 2D smectic
lattices intercalated between lipid bilayer membranes in a lamellar stack.
These lamellar DNA-cationic-lipid complexes can in principle exhibit a variety
of equilibrium phases, including a columnar phase in which parallel DNA strands
from a 2D lattice, a nematic lamellar phase in which DNA strands align along a
common direction but exhibit no long-range positional order, and a possible new
intermediate phase, the sliding columnar (SC) phase, characterized by a
vanishing shear modulus for relative displacement of DNA lattices but a
nonvanishing modulus for compressing these lattices. We develop a model capable
of describing all phases and transitions among them and use it to calculate
structural properties of the sliding columnar phase. We calculate displacement
and density correlation functions and x-ray scattering intensities in this
phase and show, in particular, that density correlations within a layer have an
unusual dependence on separation r. We
investigate the stability of the SC phase with respect to shear couplings
leading to the columnar phase and dislocation unbinding leading to the lamellar
nematic phase. For models with interactions only between nearest neighbor
planes, we conclude that the SC phase is not thermodynamically stable.
Correlation functions in the nematic lamellar phase, however, exhibit SC
behavior over a range of length scalesComment: 28 pages, 4 figure
A Tale of Two Set Theories
We describe the relationship between two versions of Tarski-Grothendieck set
theory: the first-order set theory of Mizar and the higher-order set theory of
Egal. We show how certain higher-order terms and propositions in Egal have
equivalent first-order presentations. We then prove Tarski's Axiom A (an axiom
in Mizar) in Egal and construct a Grothendieck Universe operator (a primitive
with axioms in Egal) in Mizar
A practical device for pinpoint delivery of molecules into multiple neurons in culture
We have developed a device for pinpoint delivery of chemicals, proteins, and nucleic acids into cultured cells. The principle underlying the technique is the flow of molecules from the culture medium into cells through a rupture in the plasma membrane made by a needle puncture. DNA transfection is achieved by stabbing the needle tip into the nucleus. The CellBee device can be attached to any inverted microscope, and molecular delivery can be coupled with conventional live cell imaging. Because the position of the needle relative to the targeted cultured cells is computer-controlled, efficient delivery of molecules such as rhodamine into as many as 100 HeLa cells can be completed in 10 min. Moreover, specific target cells within a single dish can be transfected with multiple DNA constructs by simple changes of culture medium containing different plasmids. In addition, the nano-sized needle tip enables gentle molecular delivery, minimizing cell damage. This method permits DNA transfection into specific hippocampal neurons without disturbing neuronal circuitry established in culture
Large Scale Immune Profiling of Infected Humans and Goats Reveals Differential Recognition of Brucella melitensis Antigens
Brucellosis is a widespread zoonotic disease that is also a potential agent of bioterrorism. Current serological assays to diagnose human brucellosis in clinical settings are based on detection of agglutinating anti-LPS antibodies. To better understand the universe of antibody responses that develop after B. melitensis infection, a protein microarray was fabricated containing 1,406 predicted B. melitensis proteins. The array was probed with sera from experimentally infected goats and naturally infected humans from an endemic region in Peru. The assay identified 18 antigens differentially recognized by infected and non-infected goats, and 13 serodiagnostic antigens that differentiate human patients proven to have acute brucellosis from syndromically similar patients. There were 31 cross-reactive antigens in healthy goats and 20 cross-reactive antigens in healthy humans. Only two of the serodiagnostic antigens and eight of the cross-reactive antigens overlap between humans and goats. Based on these results, a nitrocellulose line blot containing the human serodiagnostic antigens was fabricated and applied in a simple assay that validated the accuracy of the protein microarray results in the diagnosis of humans. These data demonstrate that an experimentally infected natural reservoir host produces a fundamentally different immune response than a naturally infected accidental human host
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