457 research outputs found
Meson correlation functions at high temperatures
We present preliminary results for the correlation- and spectral functions of
different meson channels on the lattice. The main focus lies on gaining control
over cut-off as well as on the finite-volume effects. Extrapolations of
screening masses above the deconfining temperature are guided by the result of
the free () case on the lattice and in the continuum. We study the
quenched non-perturbatively improved Wilson-clover fermion as well as the
hypercube fermion action which might show less cut-off effects.Comment: 6 pages, 8 figures (minor changes, citations added
Cooperation between COA6 and SCO2 in COX2 maturation during cytochrome c oxidase assembly links two mitochondrial cardiomyopathies.
Three mitochondria-encoded subunits form the catalytic core of cytochrome c oxidase, the terminal enzyme of the respiratory chain. COX1 and COX2 contain heme and copper redox centers, which are integrated during assembly of the enzyme. Defects in this process lead to an enzyme deficiency and manifest as mitochondrial disorders in humans. Here we demonstrate that COA6 is specifically required for COX2 biogenesis. Absence of COA6 leads to fast turnover of newly synthesized COX2 and a concomitant reduction in cytochrome c oxidase levels. COA6 interacts transiently with the copper-containing catalytic domain of newly synthesized COX2. Interestingly, similar to the copper metallochaperone SCO2, loss of COA6 causes cardiomyopathy in humans. We show that COA6 and SCO2 interact and that corresponding pathogenic mutations in each protein affect complex formation. Our analyses define COA6 as a constituent of the mitochondrial copper relay system, linking defects in COX2 metallation to cardiac cytochrome c oxidase deficiency
Simulation study of the inhomogeneous Olami-Feder-Christensen model of earthquakes
Statistical properties of the inhomogeneous version of the
Olami-Feder-Christensen (OFC) model of earthquakes is investigated by numerical
simulations. The spatial inhomogeneity is assumed to be dynamical. Critical
features found in the original homogeneous OFC model, e.g., the
Gutenberg-Richter law and the Omori law are often weakened or suppressed in the
presence of inhomogeneity, whereas the characteristic features found in the
original homogeneous OFC model, e.g., the near-periodic recurrence of large
events and the asperity-like phenomena persist.Comment: Shortened from the first version. To appear in European Physical
Journal
Polyglycerol citrate: A novel coating and inoculation material for soybean seeds.
ABSTRACT The microbial inoculation of legumes such as soybeans is crucial for thriving plant growth due to symbiotic nitrogen (N) fixation and biological plant N fertilization. Soybean requires microbial pre-inoculation before sowing using the rhizobia strain Bradyrhizobium japonicum. Peat is typical for this purpose, although not sustainable since it is a finite resource. Here, we propose a straightforwarding route to prepare and apply polyglycerol-citrate polymer (PGC), a biodegradable and fully renewable polymer, as a carrier for Bradyrhizobium japonicum inoculants for soybeans. This novel eco-friendly polymer combines the advantages of a polymeric, water-soluble structure based on biopolymers, which can protect the inoculant cells during the seed inoculation process, with protective properties of glycerol for bacterial cells and the contribution of citric acid for metabolic processes. A greenhouse study was conducted using soybean seeds coated with three different proportions of PGC with B. japonicum planted in a sand substrate free of external interference. Comparative results of N content and δ15N signature in soybean plant parts calculated from the natural abundance method associated with viability tests showed equal or superior symbiotic performance and nitrogen fixation rates to peat-based inoculants, considered the goldstandard carrier for inoculants. It ensured the shelf life of the inoculant formulations, offering convenience for farmers and environmental benefits through reduced fertilization
Accelerator measurements of magnetically-induced radio emission from particle cascades with applications to cosmic-ray air showers
For fifty years, cosmic-ray air showers have been detected by their radio
emission. We present the first laboratory measurements that validate
electrodynamics simulations used in air shower modeling. An experiment at SLAC
provides a beam test of radio-frequency (RF) radiation from charged particle
cascades in the presence of a magnetic field, a model system of a cosmic-ray
air shower. This experiment provides a suite of controlled laboratory
measurements to compare to particle-level simulations of RF emission, which are
relied upon in ultra-high-energy cosmic-ray air shower detection. We compare
simulations to data for intensity, linearity with magnetic field, angular
distribution, polarization, and spectral content. In particular, we confirm
modern predictions that the magnetically induced emission in a dielectric forms
a cone that peaks at the Cherenkov angle and show that the simulations
reproduce the data within systematic uncertainties.Comment: 5 pages, 7 figure
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Predicting seizure recurrence after an initial seizure-like episode from routine clinical notes using large language models: A retrospective cohort study
Background: The evaluation and management of first-time seizure-like events in children can be difficult because these episodes are not always directly observed and might be epileptic seizures or other conditions (seizure mimics). We aimed to evaluate whether machine learning models using real-world data could predict seizure recurrence after an initial seizure-like event. Methods: This retrospective cohort study compared models trained and evaluated on two separate datasets between Jan 1, 2010, and Jan 1, 2020: electronic medical records (EMRs) at Boston Children's Hospital and de-identified, patient-level, administrative claims data from the IBM MarketScan research database. The study population comprised patients with an initial diagnosis of either epilepsy or convulsions before the age of 21 years, based on International Classification of Diseases, Clinical Modification (ICD-CM) codes. We compared machine learning-based predictive modelling using structured data (logistic regression and XGBoost) with emerging techniques in natural language processing by use of large language models. Findings: The primary cohort comprised 14 021 patients at Boston Children's Hospital matching inclusion criteria with an initial seizure-like event and the comparison cohort comprised 15 062 patients within the IBM MarketScan research database. Seizure recurrence based on a composite expert-derived definition occurred in 57% of patients at Boston Children's Hospital and 63% of patients within IBM MarketScan. Large language models with additional domain-specific and location-specific pre-training on patients excluded from the study (F1-score 0·826 [95% CI 0·817-0·835], AUC 0·897 [95% CI 0·875-0·913]) performed best. All large language models, including the base model without additional pre-training (F1-score 0·739 [95% CI 0·738-0·741], AUROC 0·846 [95% CI 0·826-0·861]) outperformed models trained with structured data. With structured data only, XGBoost outperformed logistic regression and XGBoost models trained with the Boston Children's Hospital EMR (logistic regression: F1-score 0·650 [95% CI 0·643-0·657], AUC 0·694 [95% CI 0·685-0·705], XGBoost: F1-score 0·679 [0·676-0·683], AUC 0·725 [0·717-0·734]) performed similarly to models trained on the IBM MarketScan database (logistic regression: F1-score 0·596 [0·590-0·601], AUC 0·670 [0·664-0·675], XGBoost: F1-score 0·678 [0·668-0·687], AUC 0·710 [0·703-0·714]). Interpretation: Physician's clinical notes about an initial seizure-like event include substantial signals for prediction of seizure recurrence, and additional domain-specific and location-specific pre-training can significantly improve the performance of clinical large language models, even for specialised cohorts.</p
The bioavailability of oral GI147211 (GG211), a new topoisomerase I inhibitor.
Topoisomerase I inhibitors are new compounds of interest for cancer chemotherapy. We performed a study with GI147211, a new semisynthetic camptothecin analogue, to determine the absolute bioavailability of the drug given orally. Patients with a histologically confirmed diagnosis of a solid tumour refractory to standard forms of therapy were eligible for the study. GI147211 was given orally on day 1 and as a 30-min infusion daily on days 2-5. The treatment course was repeated every 3 weeks. In subsequent patient cohorts, the dose of the oral formulation was escalated from 1.5 mg m(-2) to 6.0 mg m(-2); the dose for i.v. administration was fixed at 1.2 mg m(-2). Plasma pharmacokinetics was performed on day 1 and 2 of the first course and on day 1 of the second course using a validated high-performance liquid chromatographic assay. Nineteen patients were entered into the study; one patient was not evaluable because the treatment course was stopped prematurely. Eighteen patients received a total of 47 treatment courses. The absolute bioavailability of GI147211 averaged 1.3 +/- 5.2%. Drug appeared quickly in plasma with a median Tmax at 0.5 h. Fasting or fed state had no significant influence on the bioavailability of GI147211. The terminal half-life after administration of oral GI147211 was 6.85 +/- 3.13 h, similar to the half-life after intravenous administration. The major toxicities were neutropenia and thrombocytopenia. Nadirs for neutropenia and thrombocytopenia occurred on day 8 and day 15 respectively. Other toxicities predominantly consisted of mild and infrequent nausea and vomiting, and fatigue. The oral administration of the drug is well tolerated. Oral administration of topoisomerase I inhibitor GI147211 results in a low bioavailability with relatively wide interpatient variation. The intravenous route of administration is advised for further development of this promising topoisomerase I inhibitor
Meson screening masses from lattice QCD with two light and the strange quark
We present results for screening masses of mesons built from light and
strange quarks in the temperature range of approximately between 140 MeV to 800
MeV. The lattice computations were performed with 2+1 dynamical light and
strange flavors of improved (p4) staggered fermions along a line of constant
physics defined by a pion mass of about 220 MeV and a kaon mass of 500 MeV. The
lattices had temporal extents Nt = 4, 6 and 8 and aspect ratios of Ns / Nt \geq
4. At least up to a temperature of 140 MeV the pseudo-scalar screening mass
remains almost equal to the corresponding zero temperature pseudo-scalar (pole)
mass. At temperatures around 3Tc (Tc being the transition temperature) the
continuum extrapolated pseudo-scalar screening mass approaches very close to
the free continuum result of 2 \pi T from below. On the other hand, at high
temperatures the vector screening mass turns out to be larger than the free
continuum value of 2 \pi T. The pseudo-scalar and the vector screening masses
do not become degenerate even for a temperature as high as 4Tc. Using these
mesonic spatial correlation functions we have also investigated the restoration
of chiral symmetry and the effective restoration of the axial symmetry. We have
found that the vector and the axial-vector screening correlators become
degenerate, indicating chiral symmetry restoration, at a temperature which is
consistent with the QCD transition temperature obtained in previous studies. On
the other hand, the pseudo-scalar and the scalar screening correlators become
degenerate only at temperatures larger than 1.3Tc, indicating that the
effective restoration of the axial symmetry takes place at a temperature larger
than the QCD transition temperature.Comment: Published versio
Antarctic Surface Reflectivity Measurements from the ANITA-3 and HiCal-1 Experiments
The primary science goal of the NASA-sponsored ANITA project is measurement
of ultra-high energy neutrinos and cosmic rays, observed via radio-frequency
signals resulting from a neutrino- or cosmic ray- interaction with terrestrial
matter (atmospheric or ice molecules, e.g.). Accurate inference of the energies
of these cosmic rays requires understanding the transmission/reflection of
radio wave signals across the ice-air boundary. Satellite-based measurements of
Antarctic surface reflectivity, using a co-located transmitter and receiver,
have been performed more-or-less continuously for the last few decades.
Satellite-based reflectivity surveys, at frequencies ranging from 2--45 GHz and
at near-normal incidence, yield generally consistent reflectivity maps across
Antarctica. Using the Sun as an RF source, and the ANITA-3 balloon borne
radio-frequency antenna array as the RF receiver, we have also measured the
surface reflectivity over the interval 200-1000 MHz, at elevation angles of
12-30 degrees, finding agreement with the Fresnel equations within systematic
errors. To probe low incidence angles, inaccessible to the Antarctic Solar
technique and not probed by previous satellite surveys, a novel experimental
approach ("HiCal-1") was devised. Unlike previous measurements, HiCal-ANITA
constitute a bi-static transmitter-receiver pair separated by hundreds of
kilometers. Data taken with HiCal, between 200--600 MHz shows a significant
departure from the Fresnel equations, constant with frequency over that band,
with the deficit increasing with obliquity of incidence, which we attribute to
the combined effects of possible surface roughness, surface grain effects,
radar clutter and/or shadowing of the reflection zone due to Earth curvature
effects.Comment: updated to match publication versio
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