1,155 research outputs found

    Rescaled mean spherical approximation for colloidal mixtures

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    In this work, the rescaled mean spherical approximation (RMSA) for colloidal mixtures interacting via a DLVO-type potential is developed, and its application to suspensions of highly charged macroions is illustrated. For this purpose we introduce a simple scheme to solve the mean spherical approximation (MSA) for Yukawa mixtures with factorized coupling parameters. This scheme consists of the mapping of the Yukawa system onto a corresponding primitive model system. Such a correspondence is used as a device for the calculation of the static structure functions of the original Yukawa mixture. Within this scheme, a straightforward implementation of the rescaling procedure is performed, which allows for the calculation of partial structure factors in strongly interacting mixtures. The rescaling procedure we use is an extension of that introduced by Hansen and Hayter for monodisperse suspensions. The structure factors obtained with the rescaled mean spherical approximation compare well with computer simulation results. The advantages and limitations of the RMSA are also discussed in some detail.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/28352/1/0000113.pd

    The Oxalate-Carbonate Pathway of Brosimum alicastrum Sw.; Moraceae

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    The oxalate - carbonate pathway (OCP) is a biogeochemical process involving plants, fungi and bacteria that transforms atmospheric CO 2 into CaCO 3 . However, until now the process has only been studied in acidic soil environments adjacent to species that have limited food - production potential . This study used an experimental approach to evaluate an OCP associated with Brosimum alicastrum , a Neotropical species that produces significant quantites of food ( ca. 70 – 200 kg - seeds yr −1 ), in the calcareous soils of Haiti and Mexico. Enzymatic analysis of various tissues from B. alicastrum indicated that the species produces significant amounts of calcium oxalate (5.97 % D.W.) at all sample sites. Oxalotroph y , the bacterial metabolism of calcium oxalate that leads to the precipitation of CaCO 3 , was also confirmed with microbiological analyses in both countries. T he typical localised alkalinisation and identification of secondary carbonate associated with the OCP was obscured at most sample sites by h igh concentrations of lithogenic carbonate and total cal cium (>7 g kg −1 ), except at Ma Rouge, Haiti. Soils adjacent to subjects in Ma Rouge presented a localised increase in CaCO 3 concentration (5.9 %) and pH (0.63) . F indings in Ma Rouge , coupled with observations of root - like secondary carbonate deposits in Me xico, strongly impl y that the OCP can also occur in calcareous soils. Th us, this study confirms that the OCP acts in calcareous soils, adjacent to species with significant food - production potential, and could play a fundamental and un - accounted role in the global calcium - carbon coupled cycl

    Genome-wide association study in an admixed case series reveals IL12A as a new candidate in Behçet disease

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    The etiology of Behçet's disease (BD) is unknown, but widely considered an excessive T-cell mediated inflammatory response in a genetically susceptible host. Recent genome-wide association studies (GWAS) have shown limited number of novel loci-associations. The rarity and unequal distribution of the disease prevalence amongst different ethnic backgrounds have hampered the use of GWAS in cohorts of mixed ethnicity and sufficient sample size. However, novel statistical approaches have now enabled GWAS in admixed cohorts.We ran a GWAS on 336 BD cases and 5,843 controls. The cases consisted of Western Europeans, Middle Eastern and Turkish individuals. Participants from the Generation R study, a multiethnic birth cohort in Rotterdam, The Netherlands were used as controls. All samples were genotyped and data was combined. Linear regression models were corrected for population stratification using Genomic Principal Components and Linear Mixed Modelling. Meta-analysis was performed on selected results previously published.We identified SNPs associated at genome-wide significant level mapping to the 6p21.33 (HLA) region. In addition to this known signal two potential novel associations on chromosomes 6 and 18 were identified, yet with low minor allele frequencies. Extended meta-analysis reveal a GWS association with the IL12A variant rs17810546 on chromosome 3.We demonstrate that new statistical techniques enable GWAS analyses in a limited sized cohort of mixed ethnicity. After implementation, we confirmed the central role of the HLA region in the disease and identified new regions of interest. Moreover, we validated the association of a variant in the IL2A gene by meta-analysis with previous work. These findings enhance our knowledge of genetic associations and BD, and provide further justification for pursuing collective initiatives in genetic studies given the low prevalence of this and other rare diseases

    Role of LKB1 in lung cancer development

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    Three phenotypically related genetic syndromes and their lesions (LKB1, PTEN, and TSC1/2) are identified as frequently altered in lung cancer. LKB1, a kinase inactivated in 30% of lung cancers, is discussed in this review. Loss of LKB1 regulation often coincident with KRAS activation allows for unchecked growth and the metabolic capacity to accommodate the proliferation

    Improved imputation quality of low-frequency and rare variants in European samples using the 'Genome of the Netherlands'

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    Although genome-wide association studies (GWAS) have identified many common variants associated with complex traits, low-frequency and rare variants have not been interrogated in a comprehensive manner. Imputation from dense reference panels, such as the 1000 Genomes Project (1000G), enables testing of ungenotyped variants for association. Here we present the results of imputation using a large, new population-specific panel: the Genome of The Netherlands (GoNL). We benchmarked the performance of the 1000G and GoNL reference sets by comparing imputation genotypes with 'true' genotypes typed on ImmunoChip in three European populations (Dutch, British, and Italian). GoNL showed significant improvement in the imputation quality for rare variants (MAF 0.05-0.5%) compared with 1000G. In Dutch samples, the mean observed Pearson correlation, r 2, increased from 0.61 to 0.71. W

    Source water, phenology and growth of two tropical dry forest tree species growing on shallow karst soils

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    Seasonally dry tropical forests are dominated by deciduous and evergreen tree species with a wide range of leaf phenology. We hypothesized that Piscidia piscipula is able to extend leaf senescence until later in the dry season due to deeper and more reliable water sources than Gymnopodium floribundum, which loses leaves earlier in the dry season. Physiological performance was assessed as timing of leaf production and loss, growth, leaf water potential, depth of water uptake determined by stable isotopes, and leaf stable isotopic composition of carbon (ÎŽÂčÂłC) and oxygen (ÎŽÂč⁞O). P. piscipula took water primarily from shallow sources, whereas G. floribundum took water from shallow and deep sources. The greatest variation in water sources occurred during the onset of the dry season, when G. floribundum was shedding old leaves and growing new leaves, but P. piscipula maintained its leaves from the previous wet season. P. piscipula showed greater relative growth rate, greater leaf expansion rates, and more negative predawn and midday water potentials than G. floribundum. P. piscipula also exhibited greater leaf organic ÎŽÂčÂłC and lower ÎŽÂč⁞O values, indicating that the decrease in photosynthetic carbon isotope discrimination was associated with greater stomatal conductance and greater photosynthesis. Our results indicate that the contrasting early and late dry season leaf loss phenology of these two species is not simply determined by rooting depth, but rather a more complicated suite of characteristics based on opportunistic use of dynamic water sources, maximizing carbon gain, and maintenance of water potential during the dry season

    Precipitation regionalization, anomalies and drought occurrence in the Yucatan Peninsula, Mexico

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    © 2020 The Authors. International Journal of Climatology published by John Wiley & Sons Ltd on behalf of the Royal Meteorological Society. Climate change projections have identified the Yucatan Peninsula as being vulnerable to increasing drought. Understanding spatial and temporal precipitation variability and drought occurrence are therefore important. Drought monitoring in Mexico has been carried out only relatively recently and often without considering the long-term variability in both droughts and precipitation. This research explores the spatio-temporal variability of precipitation and occurrence of droughts at a much finer spatial resolution and over a longer temporal period than previous studies. Using statistical (cluster analysis and standardized precipitation index) and geostatistical (kriging) techniques, maps of precipitation and droughts are generated for the period 1980–2011. These show that whilst many previous studies have regarded the Yucatan Peninsula as a homogenous region with respect to precipitation, there are actually four distinctive clusters of precipitation amount, showing climatic variability across the Peninsula. The analyses also show that droughts in the Peninsula are regionalised. Twelve-month Standardized Precipitation Indices (SPI), calculated for individual stations and for precipitation surfaces, reveal distinct patterns of spatial and temporal variability. SPI surfaces indicate the occurrence of major droughts in 1981, 1986–1987, 1994, 1996, 2003, 2004 and 2009, but these rarely affect the whole Yucatan Peninsula uniformly. Wetter years, such as 1983, 1984, 1988, 1992, 1995, 2002 and 2005 sometimes reflect the impact of individual extreme events, such as hurricane Isidore in 2002. Our results show that drought can be regionalised, thus enhancing the quality of information about droughts in the area and providing evidence and support for future drought mitigation and environmental protection. These methods could usefully be applied elsewhere

    Perspectivas de la empresa y la economĂ­a mexicana frente a la reestructuraciĂłn productiva

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    1 archivo PDF (404 pĂĄginas)Este texto se presenta una reflexiĂłn de investigadores de la UAM, asĂ­ como de otras Instituciones de EducaciĂłn Superior respecto al marco en el que se han desenvuelto las empresas mexicanas en los Ășltimos años, asĂ­ como del desarrollo en algunos de sus sistemas organizacionales. PALABRAS CLAVE: Mexico Economic policy 1970-1994
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