Profiles of Cortisol, Triiodothyronine, Thyroxine and Neutrophil/Lymphocyte Ratio as Stress Indicators in Swamp Buffaloes 15 Days Post-Transportation

Transportation may cause stress that affects livestock\u27s health. This research was conducted to observe the effect of transportation on the profiles of blood cortisol, triiodothyronine (T3), thyroxine (T4) and neutrophil/lymphocyte (N/L) ratio as stress indicators during 15 days post-transportation. Four females swamp buffaloes, 2-yr-old were used in this research. The animals were transported using an open truck, along 15 kilometers distance for 2 h. During acclimatization, the animals were fed grass twice a day and access to water ad libitum. Blood was collected at the time of arrival and everyday for 15 d post-transportation. Cortisol, T3 and T4were analyzed using Radioimmunoassay (RIA) method. Blood smears were also prepared and stained with Giemsa for leukocyte differential counts. Results showed a significant relation (P<0.05) between transport and an increase in cortisol and T4 level on day-1 post-transportation compared to the normal levels. The level of T3 was also increased on day-3 post-transportation. Total leukocyte counts were 8.91-18.83×10³/μL. Neutrophil, eosinophil, monocyte, and lymphocyte counts were 4.87-10.41×10³/μL, 0.66-1.75×10³/μL, 0.11-0.58×10³/μL, and 2.98-6.21×10³/μL, respectively. N/L ratio was 1.23-3.49 with >1.5 in average throughout the period of the research. It is concluded that transportation causes stress and therefore changes metabolic process

Ultrastructure of cytoplasmic fragments in human cleavage stage embryos

Purpose: The goal of this study was to evaluate the ultrastructure of cytoplasmic fragments along with the effect of cytoplasmic fragment and perivitelline space coarse granulation removal (cosmetic microsurgery) from embryos before embryo transfer on ART outcomes. Methods: One hundred and fifty intracytoplasmic sperm injection cycles with male factor infertility were included in this prospective study. Patients were divided into three groups of case (n = 50), sham (n = 50), and control (n = 50). Embryos with 10–50 % fragmentation were included in this study. Cosmetic microsurgery and zona assisted hatching were only performed in case and sham groups respectively. Extracted fragments were evaluated ultrastructurally by transmission electron microscopy (TEM). Rates of clinical pregnancy, live birth, miscarriage, multiple pregnancies, and congenital anomaly in the three groups were also compared. Results: Micrographs from TEM showed that mitochondria were the most abundant structures found in the fragments along with mitochondria-vesicle complexes, Golgi apparatus, primary lysosomes, and vacuoles. There were no significant differences in demographic characteristics, laboratory and clinical data, or embryo morphological features between the groups. The rate of clinical pregnancy in control, sham, and case groups had no significant differences (24, 18, and 18 %, respectively). The rates of live birth, miscarriage, multiple pregnancy, and congenital anomaly were also similar between the different groups. Conclusions: Our data demonstrated that cosmetic microsurgery on preimplantation embryos had no beneficial effect on ART outcomes in unselected groups of patients. As mitochondria are the most abundant organelles found in cytoplasmic fragments, fragment removal should be performed with more caution in embryos with moderate fragmentation

Chemical Inhibition of Wild-Type p53-Induced Phosphatase 1 (WIP1/PPM1D) by GSK2830371 Potentiates the Sensitivity to MDM2 Inhibitors in a p53-Dependent Manner

Sensitivity to MDM2 inhibitors is widely different among responsive TP53 wild-type cell lines and tumors. Understanding the determinants of MDM2 inhibitor sensitivity is pertinent for their optimal clinical application. Wild-type p53-inducible phosphatase-1 (WIP1) encoded by PPM1D, is activated, gained/amplified in a range of TP53 wild-type malignancies, and is involved in p53 stress response homeostasis. We investigated cellular growth/proliferation of TP53 wild-type and matched mutant/null cell line pairs, differing in PPM1D genetic status, in response to Nutlin-3/RG7388 ± a highly selective WIP1 inhibitor, GSK2830371. We also assessed the effects of GSK2830371 on MDM2 inhibitor-induced p53Ser15 phosphorylation, p53-mediated global transcriptional activity, and apoptosis. The investigated cell line pairs were relatively insensitive to single-agent GSK2830371. However, a non–growth-inhibitory dose of GSK2830371 markedly potentiated the response to MDM2 inhibitors in TP53 wild-type cell lines, most notably in those harboring PPM1D-activating mutations or copy number gain (up to 5.8-fold decrease in GI50). Potentiation also correlated with significant increase in MDM2 inhibitor–induced cell death endpoints that were preceded by a marked increase in a WIP1 negatively regulated substrate, phosphorylated p53Ser15, known to increase p53 transcriptional activity. Microarray-based gene expression analysis showed that the combination treatment increases the subset of early RG7388-induced p53 transcriptional target genes. These findings demonstrate that potent and selective WIP1 inhibition potentiates the response to MDM2 inhibitors in TP53 wild-type cells, particularly those with PPM1D activation or gain, while highlighting the mechanistic importance of p53Ser15 and its potential use as a biomarker for response to this combination regimen. Mol Cancer Ther; 15(3); 379–91. ©2016 AACR

Nonlinear finite element analysis of strength and durability of reinforced concrete and composite structures

The finite element method has emerged as the most powerful and versatile numerical method for solving a wide range of physical problems in science and engineering. Today a large number of commercial programs exist that can be used to solve diverse problems in structural and fluid mechanics, heat transfer and many other phenomena. However, certain critical problems related to durability of concrete structures, especially corrosion of reinforcement, cannot be readily solved using the available software. This paper presents two finite element formulations, developed by the writers, one dealing with the nonlinear analysis of composite concrete-steel bridges, and the other with the durability of concrete structures, with emphasis on the corrosion of reinforcement. The validity and accuracy of the proposed models are demonstrated by comparing their results with appropriate experimental data

Profiles of Cortisol, Triiodothyronine, Thyroxine and Neutrophil/Lymphocyte Ratio as Stress Indicators in Swamp Buffaloes 15 Days Post-Transportation

Transportation may cause stress that affects livestock’s health. This research was conducted to observe the effect of transportation on the profiles of blood cortisol, triiodothyronine (T3), thyroxine (T4) and neutrophil/lymphocyte (N/L) ratio as stress indicators during 15 days post-transportation. Four females swamp buffaloes, 2-yr-old were used in this research. The animals were transported using an open truck, along 15 kilometers distance for 2 h. During acclimatization, the animals were fed grass twice a day and access to water ad libitum. Blood was collected at the time of arrival and everyday for 15 d post-transportation. Cortisol, T3 and T4were analyzed using Radioimmunoassay (RIA) method. Blood smears were also prepared and stained with Giemsa for leukocyte differential counts. Results showed a significant relation (P<0.05) between transport and an increase in cortisol and T4 level on day-1 post-transportation compared to the normal levels. The level of T3 was also increased on day-3 post-transportation. Total leukocyte counts were 8.91-18.83×10³/μL. Neutrophil, eosinophil, monocyte, and lymphocyte counts were 4.87-10.41×10³/μL, 0.66-1.75×10³/μL, 0.11-0.58×10³/μL, and 2.98-6.21×10³/μL, respectively. N/L ratio was 1.23-3.49 with >1.5 in average throughout the period of the research. It is concluded that transportation causes stress and therefore changes metabolic process.

Chi8: a GPU program for detecting significant interacting SNPs with the Chi-square 8-df test

BACKGROUND: Determining interacting SNPs in genome-wide association studies is computationally expensive yet of considerable interest in genomics. FINDINGS: We present a program Chi8 that calculates the Chi-square 8 degree of freedom test between all pairs of SNPs in a brute force manner on a Graphics Processing Unit. We analyze each of the seven WTCCC genome-wide association studies that have about 5000 total case and controls and 400,000 SNPs in an average of 9.6 h on a single GPU. We also study the power, false positives, and area under curve of our program on simulated data and provide a comparison to the GBOOST program. Our program source code is freely available from http://www.cs.njit.edu/usman/Chi8

AdaBoost-Based Efficient Channel Estimation and Data Detection in One-Bit Massive MIMO

The use of one-bit analog-to-digital converter (ADC) has been considered as a viable alternative to high resolution counterparts in realizing and commercializing massive multiple-input multiple-output (MIMO) systems. However, the issue of discarding the amplitude information by one-bit quantizers has to be compensated. Thus, carefully tailored methods need to be developed for one-bit channel estimation and data detection as the conventional ones cannot be used. To address these issues, the problems of one-bit channel estimation and data detection for MIMO orthogonal frequency division multiplexing (OFDM) system that operates over uncorrelated frequency selective channels are investigated here. We first develop channel estimators that exploit Gaussian discriminant analysis (GDA) classifier and approximated versions of it as the so-called weak classifiers in an adaptive boosting (AdaBoost) approach. Particularly, the combination of the approximated GDA classifiers with AdaBoost offers the benefit of scalability with the linear order of computations, which is critical in massive MIMO-OFDM systems. We then take advantage of the same idea for proposing the data detectors. Numerical results validate the efficiency of the proposed channel estimators and data detectors compared to other methods. They show comparable/better performance to that of the state-of-the-art methods, but require dramatically lower computational complexities and run times

Factors Associated with Lamina Cribrosa Displacement After Trabeculectomy Measured by Optical Coherence Tomography in Advanced Primary Open Angle Glaucoma

Purpose: To investigate the relationship of lamina cribrosa displacement to corneal biomechanical properties and visual function after mitomycin C-augmented trabeculectomy. Method: Eighty-one primary open angle eyes were imaged before and after trabeculectomy using an enhanced depth spectral-domain optical coherence tomography (SDOCT). Corneal biomechanical properties were measured with the Ocular Response Analyser before the surgery. The anterior lamina cribrosa (LC) was marked at several points in each of six radial scans to evaluate LC displacement in response to Intraocular pressure (IOP) reduction. A Humphrey visual field test (HVF) was performed before the surgery as well as three and six months postoperatively. Results: Factors associated with a deeper baseline anterior lamina cribrosa depth (ALD) were cup-disc ratio (P=0.04), baseline IOP (P= 0.01), corneal hysteresis (P= 0.001), and corneal resistance factor (P= 0.001). After the surgery, the position of LC became more anterior (negative), posterior (positive) or remained unchanged. The mean LC displacement was -42 μm (P= 0.001) and was positively correlated with the magnitude of IOP reduction (regression coefficient: 0.251, P=0.02), and negatively correlated with age (regression coefficient: - 0.224, P= 0.04) as well as baseline cup-disk ratio (Regression coefficient: -0.212,P= 0.05) Eyes with a larger negative LC displacement were more likely to experience an HVF improvement of more than 3 dB gain in mean deviation (P= 0.002). Conclusion: A lower SDOCT cup-disc ratio, younger age, and a larger IOP reduction were correlated with a larger negative LC displacement and improving HVF. Corneal biomechanics did not predict LC displacement