68 research outputs found

    Non-Invasive In Vivo Imaging of Calcium Signaling in Mice

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    Rapid and transient elevations of Ca2+ within cellular microdomains play a critical role in the regulation of many signal transduction pathways. Described here is a genetic approach for non-invasive detection of localized Ca2+ concentration ([Ca2+]) rises in live animals using bioluminescence imaging (BLI). Transgenic mice conditionally expressing the Ca2+-sensitive bioluminescent reporter GFP-aequorin targeted to the mitochondrial matrix were studied in several experimental paradigms. Rapid [Ca2+] rises inside the mitochondrial matrix could be readily detected during single-twitch muscle contractions. Whole body patterns of [Ca2+] were monitored in freely moving mice and during epileptic seizures. Furthermore, variations in mitochondrial [Ca2+] correlated to behavioral components of the sleep/wake cycle were observed during prolonged whole body recordings of newborn mice. This non-invasive imaging technique opens new avenues for the analysis of Ca2+ signaling whenever whole body information in freely moving animals is desired, in particular during behavioral and developmental studies

    Application of Silicon Photomultipliers to Positron Emission Tomography

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    Historically, positron emission tomography (PET) systems have been based on scintillation crystals coupled to photomultipliers tubes (PMTs). However, the limited quantum efficiency, bulkiness, and relatively high cost per unit surface area of PMTs, along with the growth of new applications for PET, offers opportunities for other photodetectors. Among these, small-animal scanners, hybrid PET/MRI systems, and incorporation of time-of-flight information are of particular interest and require low-cost, compact, fast, and magnetic field compatible photodetectors. With high quantum efficiency and compact structure, avalanche photodiodes (APDs) overcome several of the drawbacks of PMTs, but this is offset by degraded signal-to-noise and timing properties. Silicon photomultipliers (SiPMs) offer an alternative solution, combining many of the advantages of PMTs and APDs. They have high gain, excellent timing properties and are insensitive to magnetic fields. At the present time, SiPM technology is rapidly developing and therefore an investigation into optimal design and operating conditions is underway together with detailed characterization of SiPM-based PET detectors. Published data are extremely promising and show good energy and timing resolution, as well as the ability to decode small scintillator arrays. SiPMs clearly have the potential to be the photodetector of choice for some, or even perhaps most, PET systems

    Integration of polarization in the LUTDavis model for optical Monte Carlo simulation in radiation detectors

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    ObjectiveCerenkov photons have distinctive features from scintillation photons. Among them is their polarization: their electric field is always perpendicular to the direction of propagation of light and parallel to the plane of incidence. Scintillation photons are instead considered unpolarized.ApproachThis study aims at understanding and optimizing the reflectance of polarized Cerenkov photons for optical Monte Carlo simulation of scintillation detectors with Geant4/GATE. First, the Cerenkov emission spectrum and polarization were implemented in the previously developed look-up-table Davis model of crystal reflectance. Next, we modified Geant4/GATE source code to account for scintillation and Cerenkov photons LUTs simultaneously. Then, we performed optical Monte Carlo simulations in BGO using GATE to show the effect of Cerenkov features on the photons' momentum at the photodetector face, using two surface finishes, with and without reflector.Main resultsIn this work, we describe the new features added to the algorithm and GATE. We showed that Cerenkov characteristics affect their probability to be reflected/refracted and thus their travel path within a material.SignificanceWe showed the importance of accounting for accurate Cerenkov photons reflectance while performing advanced optical Monte Carlo simulations

    Optimization of scintillator–reflector optical interfaces for the LUT Davis model

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    PurposeDesigning and optimizing scintillator-based gamma detector using Monte Carlo simulation is of great importance in nuclear medicine and high energy physics. In scintillation detectors, understanding the light transport in the scintillator and the light collection by the photodetector plays a crucial role in achieving high performance. Thus, accurately modeling them is critical.MethodsIn previous works, we developed a model to compute crystal reflectance from the crystal 3D surface measurement and store it in look-up tables to be used in the Monte Carlo simulation software GATE. The relative light output comparison showed excellent agreement between simulations and experiments for both polished and rough surfaces in several configurations, that is, without and with reflector. However, when comparing them at the irradiation depth closest to the photodetector face, rough crystals with a reflector overestimated the predicted light output. Investigating the cause of this overestimation, we optimized the LUT algorithm to improve the reflectance computation accuracy, especially for rough surfaces. However, optical Monte Carlo simulations carried out with these newly generated LUTs still overestimate the light output. Based on previous observations, one probable cause is the erroneous assumption of perfect couplings between the reflector and crystal and between the crystal and photodetector, which likely results in an important overestimation of the light output compared to experimental values. In practice, several factors could degrade it. Here, we investigated possible suboptimal optical experimental configurations that could lead to a degraded light collection when using Teflon or ESR reflectors coupled to the crystal with air or grease. We generated look-up tables with a mixture of air and grease and showed the effect of three possible sources of light loss: the presence of a small gap between the crystal and the reflector edges close to the photodetector face, the infiltration of grease in the crystal-reflector coupling, and the presence of inhomogeneities in the photodetector-crystal interface.ResultsThe strongest effect is linked to the presence of a small gap of grease between the edges of the reflector material and the crystal (light loss of 10%-12% for 0.2 mm gap). The optical grease infiltrating the crystal-reflector air coupling decreases the light output, depending on the infiltration's extent and the amount of grease infiltrated. Five percent of air in the crystal-photodetector coupling can cause a light output decrease of 2% to 4%. The individual and combined effect of these advanced models can explain the discrepancy of the relative light output obtained with ESR in simulations and experiments. With Teflon, the study indicates that the light output loss strongly depends on the reflectance deterioration caused by grease absorption.ConclusionsOur results indicate that when studying scintillation detector performance with different finishes, performing simulations in ideal coupling conditions can lead to light output overestimation. To perform an accurate light output comparison and ultimately have a reliable detector performance estimation, all potential sources of practical limitations must be carefully considered. To broadly enable high-fidelity modeling, we developed an interface for users to compute their own LUTs, using their surface, scintillator, and reflector characteristics

    DataSheet1_Effect of crystal-photodetector interface extraction efficiency on Cerenkov photons’ detection time.docx

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    Using Cerenkov photons to improve detector timing resolution in time-of-flight positron emission tomography scanners is promising since they constitute most of the signal rising edge. The main challenge in using Cerenkov light is its low yield per photoelectric interaction, which requires optimizing their complex optical transport in the detector. Monte Carlo simulations unlock information unavailable through benchtop measurements and help better understand the Cerenkov photon behavior. Although the first Cerenkov photons are emitted forward, part of the early triggering signal is lost due to poor light extraction at the crystal-photodetector interface. In addition, the electron path in the crystal, that determines the Cerenkov photon direction, is tortuous due to multiple scattering, causing the Cerenkov photons emitted after a few scatters to no longer be forward-directed. In this context, the transit time spread in the crystal, highly dependent on the detector geometry, plays a crucial role in the photon detection time. In this work, we performed optical simulations in bismuth germanium oxide using 511 keV gamma with GATE to investigate the optical photons extraction when modifying the index of refraction at the crystal-photodetector interface and the crystal aspect ratio. The mean detection time of the first, second, and third detected optical and Cerenkov photon separately was studied as a function of the total number of Cerenkov detected per event. For each configuration, we calculated the expected mean detection time using the probability of detection. Thinner crystals led to lower expected detection times due to the reduced transit time in the crystal. Reducing the refractive index discontinuity at the crystal-photodetector interface decreased all configurations expected mean detection time values. We showed that it not only improves the optical photons (scintillation and Cerenkov) detection efficiency at the photodetector face but directly ameliorates the probability of detecting the fastest one, reducing the effect of thicker materials and of losing the first detected photon information, both crucial to reduce the detector timing resolution. Thanks to their prompt emission and directionality at emission, Cerenkov photons represent the first detected optical photon in most configurations but increasing their detection efficiency is crucial to detect the fastest one.</p

    DataSheet3_Effect of crystal-photodetector interface extraction efficiency on Cerenkov photons’ detection time.docx

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    Using Cerenkov photons to improve detector timing resolution in time-of-flight positron emission tomography scanners is promising since they constitute most of the signal rising edge. The main challenge in using Cerenkov light is its low yield per photoelectric interaction, which requires optimizing their complex optical transport in the detector. Monte Carlo simulations unlock information unavailable through benchtop measurements and help better understand the Cerenkov photon behavior. Although the first Cerenkov photons are emitted forward, part of the early triggering signal is lost due to poor light extraction at the crystal-photodetector interface. In addition, the electron path in the crystal, that determines the Cerenkov photon direction, is tortuous due to multiple scattering, causing the Cerenkov photons emitted after a few scatters to no longer be forward-directed. In this context, the transit time spread in the crystal, highly dependent on the detector geometry, plays a crucial role in the photon detection time. In this work, we performed optical simulations in bismuth germanium oxide using 511 keV gamma with GATE to investigate the optical photons extraction when modifying the index of refraction at the crystal-photodetector interface and the crystal aspect ratio. The mean detection time of the first, second, and third detected optical and Cerenkov photon separately was studied as a function of the total number of Cerenkov detected per event. For each configuration, we calculated the expected mean detection time using the probability of detection. Thinner crystals led to lower expected detection times due to the reduced transit time in the crystal. Reducing the refractive index discontinuity at the crystal-photodetector interface decreased all configurations expected mean detection time values. We showed that it not only improves the optical photons (scintillation and Cerenkov) detection efficiency at the photodetector face but directly ameliorates the probability of detecting the fastest one, reducing the effect of thicker materials and of losing the first detected photon information, both crucial to reduce the detector timing resolution. Thanks to their prompt emission and directionality at emission, Cerenkov photons represent the first detected optical photon in most configurations but increasing their detection efficiency is crucial to detect the fastest one.</p
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