Genetic diversity and differentiation among the species of African mahogany (Khaya spp.) based on a large SNP array

The genus Khaya includes some of the highest-value timber species in natural forests in Africa, which are under heavy exploitation pressure. Genetic identification of Khaya species is important to confirm the taxonomic classification for biodiversity conservation purposes and as a forensic tool aiding law enforcement in the fight against illegal logging. We collected samples from a total of 2222 trees belonging to five or six (depending on classification) different Khaya species (K. ivorensis, K. anthotheca/K. nyasica, K. grandifoliola, K. senegalensis, K. madagascariensis). Representative sampling was conducted over the natural ranges of all sampled Khaya species, in humid tropical forest and savanna zones. We genotyped individuals based on 101 molecular markers (67 nuclear, 11 chloroplast and 22 mitochondrial SNPs, 1 chloroplast indel). Bayesian clustering produced three main genetic groups assigning all K. ivorensis and all K. senegalensis trees, respectively, in two different clusters and all remaining individuals in a third cluster. Genetic self-assignment tests with all 101 SNPs had success rates of 97-100% for all species except for K. nyasica and K. madagascariensis, which could not be clearly distinguished from each other. A success rate for species identification nearly as high was observed using a subset of 15 highly differentiated SNPs. There was only very little evidence for hybridization among species and the vast majority (> 97%) of individuals were assigned to the same species group as identified based on morphological characters

Seeding resilient restoration: an indicator system for the analysis of tree seed systems

Achieving multi-million-hectare commitments from countries around the world to restore degraded lands in resilient and sustainable ways requires, among other things, huge volumes of tree planting material. Seed systems encompassing all forest reproductive material (e.g., seeds, cuttings, stakes, and wildings), are key to ensuring that sufficient planting material with a diverse range of suitable species, adapted to local conditions and capable of persisting under a changing climate, is available for restoration projects. The ideal structure of a seed system integrates five components: seed selection and innovation, seed harvesting and production, market access, supply and demand, quality control, and an enabling environment. We propose 15 indicators to evaluate these key components and trial them by assessing national seed systems in 7 Latin American countries. We conclude that the indicators enable a straightforward assessment of the strengths and weaknesses of national seed systems, thus assisting governments to identify key areas for improvement and opportunities for horizontal learnin