748 research outputs found
Poly-paraphyly of Hirudinidae: many lineages of medicinal leeches
<p>Abstract</p> <p>Background</p> <p>Medicinal leeches became infamous for their utility in bloodletting popularized in the 19<sup>th </sup>century, and have seen a recent resurgence in post-operative treatments for flap and replantation surgeries, and in terms of characterization of salivary anticoagulants. Notorious throughout the world, the quintessential leech family Hirudinidae has been taken for granted to be monophyletic, as has the non-bloodfeeding family Haemopidae.</p> <p>Results</p> <p>This study is the first to evaluate molecular evidence from hirudinid and haemopid leeches in a manner that encompasses the global scope of their taxonomic distributions. We evaluated the presumed monophyly of the Hirudinidae and assessed previous well-accepted classification schemes. The Hirudinidae were found not to be monophyletic, falling instead into two distinct and unrelated clades. Members of the non-bloodfeeding family Haemopidae were scattered throughout the tree and among traditional hirudinid genera. A combination of nuclear 18S rDNA and 28S rDNA with mitochondrial 12S rDNA and cytochrome <it>c </it>oxidase I were analyzed with Parsimony and with Bayesian methods.</p> <p>Conclusion</p> <p>The family Hirudinidae must be refined to include only the clade containing <it>Hirudo medicinalis </it>(European medicinal leech) and related leeches irrespective of bloodfeeding behavior. A second clade containing <it>Macrobdella decora </it>(North American medicinal leech) and its relatives may yet be recognized in Semiscolecidae in order to avoid paraphyly. The African distribution of species from each of the divergent hirudinid clades suggests that a deep divergence took place in the history of the medicinal leeches hundreds of millions of years ago.</p
Noise
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/75459/1/j.1096-0031.1999.tb00394.x.pd
iDNA from terrestrial haematophagous leeches as a wildlife surveying and monitoring tool - prospects, pitfalls and avenues to be developed
Invertebrate-derived DNA (iDNA) from terrestrial haematophagous leeches has recently been proposed as a powerful non-invasive tool with which to detect vertebrate species and thus to survey their populations. However, to date little attention has been given to whether and how this, or indeed any other iDNA-derived data, can be combined with state-of-the-art analytical tools to estimate wildlife abundances, population dynamics and distributions. In this review, we discuss the challenges that face the application of existing analytical methods such as site-occupancy and spatial capture-recapture (SCR) models to terrestrial leech iDNA, in particular, possible violations of key assumptions arising from factors intrinsic to invertebrate parasite biology. Specifically, we review the advantages and disadvantages of terrestrial leeches as a source of iDNA and summarize the utility of leeches for presence, occupancy, and spatial capture-recapture models. The main source of uncertainty that attends species detections derived from leech gut contents is attributable to uncertainty about the spatio-temporal sampling frame, since leeches retain host-blood for months and can move after feeding. Subsequently, we briefly address how the analytical challenges associated with leeches may apply to other sources of iDNA. Our review highlights that despite the considerable potential of leech (and indeed any) iDNA as a new survey tool, further pilot studies are needed to assess how analytical methods can overcome or not the potential biases and assumption violations of the new field of iDNA. Specifically we argue that studies to compare iDNA sampling with standard survey methods such as camera trapping, and those to improve our knowledge on leech (and other invertebrate parasite) physiology, taxonomy, and ecology will be of immense future value
Ideating IDNA: Lessons and Limitations From Leeches in Legacy Collections
Indirect methods for conducting faunal inventories present great promise, and genomic inventories derived from environmental sources (eDNA) are improving. Invertebrate ingested DNA (iDNA) from terrestrial leeches in the family Haemadipsidae has shown potential for surveying vertebrates and biodiversity monitoring in protected areas. Here we present an initial, and critical, evaluation of the limitations and biases of current iDNA protocols for biodiversity monitoring using both standard and NGS barcoding approaches. Key findings include the need for taxon relevant multi-locus markers and reference databases. In particular, the limitations of available reference databases have profound potential to mislead and bias eDNA and iDNA results if not critically interpreted. Nevertheless, there is great potential for recovery of amplifiable DNA from gut contents of invertebrate museum specimens which may reveal both temporal patterns and cryptic diversity in protected areas with increased efficiency. Our analyses of ingested DNA (iDNA) from both freshly stored and previously collected (legacy) samples of terrestrial leeches successfully identified vertebrates from Myanmar, Australia and Madagascar and indicate the potential to characterize microbial communities, pathogen diversity and interactions at low cost
Forum. Stratigraphic Fit to Phylogenies: A Proposed Solution
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/73634/1/j.1096-0031.1998.tb00333.x.pd
Giant crystal-electric-field effect and complex magnetic behavior in single-crystalline CeRh3Si2
Single-crystalline CeRh3Si2 was investigated by means of x-ray diffraction,
magnetic susceptibility, magnetization, electrical resistivity, and specific
heat measurements carried out in wide temperature and magnetic field ranges.
Moreover, the electronic structure of the compound was studied at room
temperature by cerium core-level x-ray photoemission spectroscopy (XPS). The
physical properties were analyzed in terms of crystalline electric field and
compared with results of ab-initio band structure calculations performed within
the density functional theory approach. The compound was found to crystallize
in the orthorhombic unit cell of the ErRh3Si2 type (space group Imma -- No.74,
Pearson symbol: oI24) with the lattice parameters: a = 7.1330(14) A, b =
9.7340(19) A, and c = 5.6040(11) A. Analysis of the magnetic and XPS data
revealed the presence of well localized magnetic moments of trivalent cerium
ions. All physical properties were found to be highly anisotropic over the
whole temperature range studied, and influenced by exceptionally strong
crystalline electric field with the overall splitting of the 4f1 ground
multiplet exceeding 5700 K. Antiferromagnetic order of the cerium magnetic
moments at TN = 4.70(1)K and their subsequent spin rearrangement at Tt =
4.48(1) K manifest themselves as distinct anomalies in the temperature
characteristics of all investigated physical properties and exhibit complex
evolution in an external magnetic field. A tentative magnetic B-T phase
diagram, constructed for B parallel to the b-axis being the easy magnetization
direction, shows very complex magnetic behavior of CeRh3Si2, similar to that
recently reported for an isostructural compound CeIr3Si2. The electronic band
structure calculations corroborated the antiferromagnetic ordering of the
cerium magnetic moments and well reproduced the experimental XPS valence band
spectrum.Comment: 32 pages, 12 figures, to appear in Physical Review
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