Automatic plankton quantification using deep features

The study of marine plankton data is vital to monitor the health of the world’s oceans. In recent decades, automatic plankton recognition systems have proved useful to address the vast amount of data collected by specially engineered in situ digital imaging systems. At the beginning, these systems were developed and put into operation using traditional automatic classification techniques, which were fed with handdesigned local image descriptors (such as Fourier features), obtaining quite successful results. In the past few years, there have been many advances in the computer vision community with the rebirth of neural networks. In this paper, we leverage how descriptors computed using Convolutional Neural Networks (CNNs) trained with out-of-domain data are useful to replace hand-designed descriptors in the task of estimating the prevalence of each plankton class in a water sample. To achieve this goal, we have designed a broad set of experiments that show how effective these deep features are when working in combination with state-of-the-art quantification algorithms

Strategies for use, treatment, management and final disposition of wastes in academic laboratories

Laboratory higher education institutions can generate a wide range of wastes,many of which have hazardous characteristics. The uncontrolled accumulation of such wastes also has a significant impact on the environment, safety and health of the academic community. This work formulates strategies that allow the development of integrated solutions to mitigate the latent risk for the community at Institución Universitaria Colegio Mayor de Antioquia,Colombia, and its surroundings. Therefore, it is considered to quantify the generation of waste in the units of analysis of different experimental spacesand evaluate the factors involved in the implementation of strategies for diagnosis, waste recovery, treatment, and final disposition. Based on the diagnosis and characterization of wastes, alternatives are evaluated that help to prevent and, in other cases, mitigate the impacts that they can cause, in order to consolidate a protocol for waste management. Hazardous waste disposition strategies, treatment mechanisms and minimization strategies, such as microchemistry, precipitation recycling, encapsulation and immobilization methods, evaporation as well as solvent recovery, have been implemented

Seasonal Growth Curves of Perennial Ryegrass in Mexico

An experiment was established at Colegio de Postgraduados Research Station, Texcoco, México to evaluate the seasonal pattern of growth curve of perennial ryegrass (Lolium perenne) swards. Growth rate increases rapidly from a low level immediately after defoliation, and eventually reaches an equilibrium level as the amount of green leaf in the sward stabilize. The time required to reach this state varied according to the season of year, with the four seasons ranked in the order: spring (4 weeks) \u3c summer (5 weeks) \u3c autumn and winter (6 weeks). Once swards reached equilibrium, growth rates started to decline as a consequence of an increase in dead material and pseudostem. These increases were highest in spring and lowest in winter. The results of this study suggest that sward management to maximise herbage production and utilisation in ryegrass swards must be done once the highest green leaf mass is reached. In this trial, it was reached at 5, 6, 6 and 4 weeks in summer, autumn, winter and spring, respectively

POLYBIUS2020, a cost-effective underwater autonomous video system to record fishing gear selectivity performance catching fish and marine litter

Underwater video cameras are a highly versatile survey solution for marine fisheries research. The POLYBIUS2020 is a system specially designed to be used as a tool for video recording inside towed fishing gears. Its design allows for rapid installation onboard commercial fishing vessels as well as for quick reconfiguration and battery replacement. The system is based on simple commercial components to ensure low costs and the opportunity of future studies using house technology. The field experiments carried out have shown the flexibility and ability of the system to obtain key information about fishing selectivity, flora and fauna characterization and marine litter presence

Absorption and cutaneous deposition of yellow pigment in male and female broilers in response to different levels of xanthophylls from Tagetes erecta

To determine the saturation point of absorption and cutaneous deposition of yellow xanthophylls (XA) in broilers, two hundred and sixteen Ross 308 chickens (108 males and 108 females) were sorted by sex and randomly assigned to 6 dietary treatments containing 6 replications of 6 birds each. Treatments consisted of increasing levels of xanthophylls from Aztec marigold flower (Tagetes erecta) (65, 92, 119, 146, 173, and 200 ppm). Weight gain, feed consumption, and feed conversion were measuredweekly. Plasma pigment levels and skin yellowness in live birds were measured twice per week. Growth performance was analysed through ANOVA for a 6X2 factorial arrangement, where the first factor was the XA adding at six levels, and the second factor was sex at two levels. Pigment plasma concentration and skin yellowness were fitted into a multiple linear regression model. Results indicated that the highest levels of plasma xanthophylls and skin yellowness were found after 28 d of feeding. Skin yellowness increased by 2.24 b* for every d of xanthophylls consumption. In the females, skin yellowness was 1.35 b* higher than in the males. Increasing dietary xanthophylls by 10 ppm was reflected in 0.83 b* of increase in skin yellowness

Contribution of the single photon emission computed tomography with 99mTc red blood cells in splenosis

The term splenosis refers to the presence of auto-transplanted splenic tissue in a heterotopic location. These foci can be localized to the liver simulating a malignant lesion. Sometimes these lesions are difficult to identify using conventional imaging techniques (ultrasound, CT and MR). Then, a scan with denatured erythrocytes marked with 99mTc has proven to be an effective technique to confirm the diagnosis of splenosis and to establish its extension. The incorporation of hybrid imaging techniques (SPECT-CT) into usual clinical practice has increased the precision of the localization of these foci of splenosis. We hereby report the cases of two patients diagnosed with splenosis, the first by laparotomy and the second after performing scintigraphy with red blood cells labeled with 99mTc. In the first case, the laparotomy revealed numerous reticulated nodules on the diaphragmatic peritoneal surface, the transverse colon and the right kidney. Finally, the anatomopathological diagnosis confirmed a case of splenosis. In the second case, the results of the 99mTc marked red blood cell gammagraphy and SPECT-CT were consistent with the diagnosis of splenosis in the patient. To obtain correct information in cases of lesions highly suspicious of splenosis, 99mTc marked red blood cell gammagraphy should be performed due to the high sensitivity and specificity of the test. Combined diagnostic imaging (SPECT-CT), have increased the specificity of this test due to improvements in the characterization of lesions. We believe that the use of this technique will help avoid unnecessary surgical procedures

ICOS-Spain. Activity Report 2021-2022

Editors: O.E. García, S.F. León-Luis y Melchor González-Dávila.[ES]El Sistema Integrado de Observación del Carbono (ICOS) es una infraestructura europea de investigación (ERIC) que tiene por objetivo la monitorización de gases de efecto invernadero. Esta iniciativa está financiada por la Unión Europea y países socios. La Asamblea General de ICOS aprobó la solicitud de adhesión de España, y su incorporación se hizo oficial el 1 de enero de 2021. En la actualidad, la red ICOS-España, donde AEMET ejerce la coordinación, cuenta con cinco estaciones que cubren los dominios: atmosférico, oceánico y de ecosistema. El "Informe de Actividades ICOS-España: 2021-2022" presenta las principales tareas llevadas a cabo en cada estación, con el objetivo de obtener la certificación ICOS y mostrar el estado actual de avance en este proceso. Además, el informe también resume las actividades de comunicación y difusión realizadas por los investigadores que forman parte del nodo nacional.[EN]The Integrated Carbon Observation System (ICOS) is a European Research Infrastructure (ERIC) that aims to monitor greenhouse gases. This initiative is funded by the European Union and partner countries. The ICOS General Assembly approved Spain's membership, and its incorporation officially began on January 1, 2021. Currently, the ICOS-Spain national network, coordinated by AEMET, has five stations covering atmospheric, oceanic, and ecosystem domains. The "ICOS-Spain Activities Report: 2021-2022" presents the main tasks carried out at each station, with the aim of obtaining ICOS certification and the current situation of this process. In addition, the report also summarizes the communication and dissemination activities carried out by the researchers who are part of the national node

Clostridioides difficile-associated diarrhea in surgical service patients in Mexico

Introduction: Clostridium difficile is the first cause of healthcare-associated diarrhea in developed countries. In recent years the incidence of C. difficile infection (CDI) has increased worldwide. There is not much information on the topic in Mexico, and little is known about the risk factors for the infection in patients that are hospitalized in surgical services. Materials and methods: A case-control study was conducted that compared the epidemiologic findings and risk factors between surgical patients with PCR-confirmed CDI, surgical patients with diarrhea and a negative PCR test, and surgical patients with no diarrhea. The statistical analysis was carried out using the SPSS version 22.0 program. Results: The majority of the surgical patients with CDI belonged to the areas of neurosurgery, cardiac surgery, orthopedics, and general surgery. A total of 53% of the CDI cases were associated with the hypervirulent CD NAP1/027 strain. The presence of mucus in stools (OR: 1.5, p = 0.001), fever (OR: 1.4, p = 0.011), leukocytes in stools (OR: 3.2, p < 0.001), hospitalization within the past twelve weeks (OR: 2.0, p < 0.001), antibiotic use (OR: 1.3, p = 0.023), and ceftriaxone use (OR: 1.4, p = 0.01) were independent risk factors for the development of CDI

Diarrea asociada a Clostridioides difficile en pacientes de servicios quirúrgicos en México

Introducción: Clostridioides difficile (CD) es la primera causa de diarrea asociada al cuidadode salud en los países desarrollados. En los últimos a˜nos, la incidencia de la infección asociadaa CD (ICD) ha aumentado en el ámbito mundial. En México, la información al respecto es escasay se conoce poco sobre los factores de riesgo para esta enfermedad en pacientes hospitalizadosen servicios quirúrgicosMaterial y métodos: Estudio de casos y controles. Se compararon hallazgos epidemiológicos yfactores de riesgo entre pacientes quirúrgicos con ICD confirmada por PCR contra pacientes qui-rúrgicos con diarrea PCR negativa y contra pacientes quirúrgicos sin diarrea. Se realizó análisisestadístico mediante el paquete estadístico SPSS versión 22.0.Resultados: La mayoría de los pacientes quirúrgicos con ICD correspondían a las áreas de neu-rocirugía, cardiocirugía, ortopedia y cirugía general. El 53% de los casos de ICD se asociaron a lacepa hipervirulenta de CD NAP1/027. La presencia de moco en heces (RM 1.5, p = 0.001), fiebre(RM 1.4, p = 0.011), leucocitos en heces (RM 3.2, p = < 0.001), hospitalización en las últimas12 semanas (RM 2.0, p = < 0.001), uso de antibióticos (RM 1.3, p = 0.023) y uso de ceftriaxona(RM 1.4, p = 0.01) constituyeron factores de riesgo independientes para el desarrollo de ICD. Conclusiones: La diarrea por CD en servicios quirúrgicos es frecuente en nuestra institución(Hospital Civil de Guadalajara Fray Antonio Alcalde)