Body Size Evolution in Extant Oryzomyini Rodents: Cope's Rule or Miniaturization?

At the macroevolutionary level, one of the first and most important hypotheses that proposes an evolutionary tendency in the evolution of body sizes is “Cope's rule". This rule has considerable empirical support in the fossil record and predicts that the size of species within a lineage increases over evolutionary time. Nevertheless, there is also a large amount of evidence indicating the opposite pattern of miniaturization over evolutionary time. A recent analysis using a single phylogenetic tree approach and a Bayesian based model of evolution found no evidence for Cope's rule in extant mammal species. Here we utilize a likelihood-based phylogenetic method, to test the evolutionary trend in body size, which considers phylogenetic uncertainty, to discern between Cope's rule and miniaturization, using extant Oryzomyini rodents as a study model. We evaluated body size trends using two principal predictions: (a) phylogenetically related species are more similar in their body size, than expected by chance; (b) body size increased (Cope's rule)/decreased (miniaturization) over time. Consequently the distribution of forces and/or constraints that affect the tendency are homogenous and generate this directional process from a small/large sized ancestor. Results showed that body size in the Oryzomyini tribe evolved according to phylogenetic relationships, with a positive trend, from a small sized ancestor. Our results support that the high diversity and specialization currently observed in the Oryzomyini tribe is a consequence of the evolutionary trend of increased body size, following and supporting Cope's rule

Glaciation Effects on the Phylogeographic Structure of Oligoryzomys longicaudatus (Rodentia: Sigmodontinae) in the Southern Andes

The long-tailed pygmy rice rat Oligoryzomys longicaudatus (Sigmodontinae), the major reservoir of Hantavirus in Chile and Patagonian Argentina, is widely distributed in the Mediterranean, Temperate and Patagonian Forests of Chile, as well as in adjacent areas in southern Argentina. We used molecular data to evaluate the effects of the last glacial event on the phylogeographic structure of this species. We examined if historical Pleistocene events had affected genetic variation and spatial distribution of this species along its distributional range. We sampled 223 individuals representing 47 localities along the species range, and sequenced the hypervariable domain I of the mtDNA control region. Aligned sequences were analyzed using haplotype network, Bayesian population structure and demographic analyses. Analysis of population structure and the haplotype network inferred three genetic clusters along the distribution of O. longicaudatus that mostly agreed with the three major ecogeographic regions in Chile: Mediterranean, Temperate Forests and Patagonian Forests. Bayesian Skyline Plots showed constant population sizes through time in all three clusters followed by an increase after and during the Last Glacial Maximum (LGM; between 26,000–13,000 years ago). Neutrality tests and the “g” parameter also suggest that populations of O. longicaudatus experienced demographic expansion across the species entire range. Past climate shifts have influenced population structure and lineage variation of O. longicaudatus. This species remained in refugia areas during Pleistocene times in southern Temperate Forests (and adjacent areas in Patagonia). From these refugia, O. longicaudatus experienced demographic expansions into Patagonian Forests and central Mediterranean Chile using glacial retreats

Patrones de distribución geográfica de la riqueza de especies de roedores de la tribu Oryzomyini (Rodentia: Sigmodontinae) en Sudamérica: Evaluando la importancia de los procesos de colonización y extinción Geographic patterns of richness distribution of rodents species from the Oryzomyini tribe (Rodentia: Sigmodontinae) in South America: Evaluating the importance of colonization and extinction processes

La tribu de roedores Oryzomyini es la más diversa dentro de la subfamilia Sigmodontinae. Está constituida por 120 especies y 31 géneros, de las cuales 83 son endémicas del continente sudamericano. Este grupo exhibe una extensa distribución que abarca toda la región Neotropical, caracterizada por la presencia de una mayor riqueza en la Amazonia con una disminución monotónica hacia el sur y norte de Sudamérica. Este es un patrón bastante conocido en la mayoría de los taxones, por lo que se han propuesto varios mecanismos causales. Sin embargo, se desconocen los mecanismos que dan cuenta de este gradiente latitudinal en la riqueza de especies de Oryzomyini. Debido a que estas especies son originarias de la Amazonia, y que a través de su historia colonizaron ambientes nuevos y más variables (sur y norte), se evaluó la hipótesis fuente-sumidero, mediada por procesos de colonización y extinción, como potencial explicación al patrón de riqueza observado. Para evaluar esta hipótesis se reunió una base de datos de distribución y riqueza de especies por grado de latitud para todo el continente sudamericano. Posteriormente se evaluó el grado de anidamiento mediante los índices de T (temperatura), BR (discrepancia) y NODF. Nuestros resultados evidenciaron un grado de anidamiento significativo en la distribución de Oryzomyini, y un anidamiento significativo separadamente en filas y columnas de la matriz. Por lo tanto, se concluye que la dinámica fuente-sumidero afecta el patrón de distribución de la riqueza de roedores Oryzominos, a través de un proceso de colonización durante su expansión en Sudamérica que fue mediado por los rangos de tolerancia de las especies. Finalmente, las especies menos tolerantes se habrían extinguido, lo que determinaría un menor número de especies hacia el sur y norte de la Amazonia.The Oryzomyini rodent tribe is the most diverse taxon within the Sigmodontinae subfamily. This tribe includes 120 species and 31 genera, of which 83 are endemic to the South American continent. This tribe presents a wide distribution, covering the entire Neotropical biogeographic province, and is characterized by the presence of greater richness in the Amazonian area, with a monotonic decrease towards the south and north of South America. This pattern is well-known in many taxa, for which various causal mechanisms have been proposed. However, the mechanisms that explain this pattern of species richness along the latitudinal gradient in the Oryzomyini tribe are unknown. Given that these species are native to Amazonia, and that throughout their history they colonized new and more variable environments (towards the south and north), we evaluated the source-sink hypothesis, mediated by processes of colonization and extinction, as a potential explanation for the observed pattern of richness. To test this hypothesis we built a database of species' distribution and richness every one degree of latitude for the entire South American continent. Subsequently we assessed the degree of nestedness using the T (temperature), BR (discrepancy) and NODF indices. Our results show a significant degree of nesting in the Oryzomyini distribution, and a significant degree of nesting of the rows and columns of the data matrix, separately. Therefore, we conclude that source-sink dynamics affect the pattern of richness distribution of Oryzomine rodents, through a process of colonization during its expansion in South America, which was conditioned by the range of tolerance of the species. This resulted in the extinction of the less tolerant species, which finally resulted in a lower number of species towards the south and north of Amazonia

Diferencias en el ensamble de micromamíferos entre áreas con distinto grado de protección del sitio Prioritario los Molles-Pichidangui

Abstract: The conservation of biodiversity in Mediterranean Chile requires a greater coverage than that represented in the Protected Wild Areas of the State (SNASPE) and Private Protec ted Areas (APP) are complementary alternative for conservation. The study of biodiver sity in APP is scarce, ignoring its contribution to the conservation. The small mammals assemblage of the APP Bioparque Puquén and surroundings was described comparing the species richness, relative abundance and diversity index of Margalef inside and out side the park. Using the Morisita-Horn similarity index and a cluster analysis, the small mammals assemblage was compared between sampling points categorized in different biotopes. Endemic and native species were more abundant outside the APP. There were no significant differences in specific richness or diversity inside and outside the APP. The small mammals assemblage was grouped into biotopes of dense native vegetation and prairies, ravines and seasonal waters. The park would act as buffer area, protecting the nearby areas of the Los Molles-Pichidangui Priority Site. The importance of rocky outcrops as a habitat for endemic species of small mammals and protecting the areas adjacent to the BioParque is discussed.Resumen: La conservación de la biodiversidad en Chile Mediterráneo requiere una mayor cobertura en el Sistema Nacional de Áreas Silvestres Protegidas del Estado, por lo que las Áreas Pro tegidas Privadas (APP) son alternativas complementarias para la conservación. El estudio de la biodiversidad en las APP es escaso, desconociendo su aporte en la conservación. Se describió el ensamble de micromamíferos del APP Bioparque Puquén y alrededores comparando la riqueza de especies, abundancia relativa e índice de diversidad de Marga- lef al interior y exterior del parque. Mediante el índice de similitud de Morisita-Horn y un análisis de agrupamientos se comparó el ensamble de micromamíferos entre puntos de muestreos categorizados en distintos biotopos. Las especies endémicas y nativas fueron más abundantes fuera del APP. No hubo diferencias significativas en la riqueza específica ni diversidad dentro y fuera del APP. El ensamble de micromamíferos se agrupó en bioto pos de vegetación nativa densa y de praderas, quebradas y aguas estacionales. El parque actuaría como área de amortiguación, protegiendo las áreas aledañas del Sitio Prioritario Los Molles-Pichidangui. Se discute la importancia de los escollos como hábitat de es pecies endémicas de micromamíferos y de proteger las áreas adyacentes al BioParque

Phylogeography of a mountain lizard species: An ancient fragmentation process mediated by riverine barriers in the Liolaemus monticola complex (Sauria: Liolaemidae)

Liolaemus monticola is a mountain lizard species, with a widespread distribution from central Chile that displays several highly polymorphic chromosomal races. Our study determined the phylogeographic structuring and relationships among three chromosomal races of L. monticola in Chile. Mitochondrial DNA (mtDNA) sequences of the cytochrome b gene were examined using the following phylogenetic methods: maximum parsimony, maximum likelihood, Bayesian inference and nested clade phylogeographic analyses (NCPAs). These methods revealed two major monophyletic clades (north and south) in the L. monticola species, with non-overlapping geographical locations separated by the Maipo and Yeso rivers (except one hybrid, from a zone of secondary contact). The NCPA showed that a past fragmentation process likely resulted in the separation of the two clades. The southern clade includes all samples of the 'Southern, 2n = 34' race; the northern clade is comprised of all remaining derived chromosomal rac

Phylogenetic Analyses of Lizards from the Chilean Humboldt Archipelago Reveal a New Species for the Chañaral Island (Squamata: Liolaemidae)

The Humboldt Archipelago, situated on Chile’s north-central coast, is renowned for its exceptional biodiversity. However, lizards of the Liolaemus genus are a particularly understudied group in this archipelago. Liolaemus genus is divided into two clades: chiliensis and nigromaculatus. Within the nigromaculatus clade the zapallarensis group is restricted to the semi-arid and arid coastal habitats of the Atacama Desert in north-central Chile. While it has been reported that lizards from the zapallarensis group inhabit various islands within the Humboldt Archipelago, there has been limited knowledge regarding their specific species identification. To identify the lizard species inhabiting these islands, we conducted phylogenetic analyses using a mitochondrial gene and examined morphological characteristics. Our findings reveal that lizards from the Damas, Choros, and Gaviota islands belong to Liolaemus silvai. In contrast, the lizards on Chañaral Island form a distinct and previously unrecognised group, clearly distinguishable from Liolaemus silvai. In conclusion, our study not only confirms the presence of L. silvai on the Damas, Choros, and Gaviota islands but also describes a new lizard species on Chañaral Island named Liolaemus carezzae sp. nov. These findings contribute valuable insights into the biodiversity of these islands and introduce a newly discovered endemic taxon to the region, enriching our understanding of Chile’s unique island ecosystems