21 research outputs found

    Diversité génétique du bénitier (Tridacna maxima) en Polynésie française et réponse au stress thermique : une approche intégrée de génomique fonctionnelle

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    Giant clams are endangered species but Tridacna maxima is still well represented in French Polynesia. Firstly, the genetic structure assessment has led to the discovery of a monophyletic group composed of two new T. maxima clades in French Polynesia which cohabite over a large area with a North-West South-East axis on either side of which, one of each clade is dominant: “North Mapiko” (Tuamotu group) and “South Mapiko” (other archipelagos group). Interconnectivity between different island giant clam populations is not consistent with the present flow of oceanic currents. These results, along with those obtained for Tongian and Fidjian samples, allowed us to suggest hypothesis regarding the giant clam colonization of French Polynesia and the factors which may have influenced the present connectivity. French Polynesian T. maxima was found to have a lower genetic diversity compared to those from Indo-Pacific region, and so considered to be relatively more vulnerable to environmental global changes. Stress adaptation capacity of giant clam was assessed by the follow-up of the metabolite composition and gene expression variations during a thermal time course experiment. Giant clam fatty acid composition was established for the first time and its variation was evaluated along the stress experiment. Impact of the thermal stress on the metabolite composition and gene expression were disclosed. Variation in fatty acids compositions was observed and linked to variation in some specific gene expression. Impact of giant clam proximity with corals and impact of a second supplementary applied stress were also assessed. Study of Symbiodinium symbiosis with giant clam showed that giant clam resistance and adaptation capacity observed for 15 days was independent of symbiotic community behavior. Key words : Tridacna maxima, giant clam, French Polynesia, genetic diversity, thermal stress, integrative approach, transcriptomic, metabolomic, Symbiodinium.Les bĂ©nitiers font partie des espĂšces protĂ©gĂ©es, mais l’espĂšce Tridacna maxima reste encore trĂšs prĂ©sente en PolynĂ©sie française. L’étude de sa structure gĂ©nĂ©tique a permis de caractĂ©riser pour la premiĂšre fois une lignĂ©e monophylĂ©tique de bĂ©nitiers en PolynĂ©sie Française, composĂ©e de deux clades distincts rĂ©partis de part et d’autre d’un axe nord-ouest/sud-est sĂ©parant majoritairement les populations des Tuamotu (mapiko nord) de celles des autres archipels (mapiko sud). La connectivitĂ© entre les populations des diffĂ©rentes Ăźles n’est pas cohĂ©rente avec les courants ocĂ©aniques de surface actuels en PolynĂ©sie française. Ces rĂ©sultats, et ceux obtenus sur des bĂ©nitiers provenant de Fidji et de Tonga, ont permis d’émettre des hypothĂšses sur la colonisation de la PolynĂ©sie française par les bĂ©nitiers et les facteurs qui ont influencĂ© la connectivitĂ© actuelle. PrĂ©sentant une plus faible diversitĂ© gĂ©nĂ©tique que les populations de T. maxima de la rĂ©gion Indo-Pacifique, celles de PolynĂ©sie française pourraient ĂȘtre plus vulnĂ©rables aux changements environnementaux. La capacitĂ© d’adaptation au stress des bĂ©nitiers a Ă©tĂ© Ă©tudiĂ©e par une Ă©tude intĂ©grĂ©e des variations de la composition en mĂ©tabolites et de l’expression gĂ©nique lors d’expĂ©riences de rĂ©chauffement. La composition en acides gras des bĂ©nitiers a notamment Ă©tĂ© Ă©tablie pour la premiĂšre fois lors de nos travaux, et sa variation Ă©valuĂ©e au cours du stress. Les donnĂ©es de transcriptomiques ont pour la premiĂšre fois mise Ă  jour les voies de rĂ©ponses au stress thermique chez les bĂ©nitiers dont certaines semblent corrĂ©lĂ©es aux variations observĂ©es de la composition en acide gras. L’effet de la proximitĂ© des bĂ©nitiers avec les coraux dans le milieu et l’impact d’un second type de stress supplĂ©mentaire ont Ă©galement Ă©tĂ© Ă©valuĂ©s. L’étude des Symbiodinium des bĂ©nitiers a permis de montrer que leur rĂ©sistance et leur capacitĂ© d’adaptation au stress d’une durĂ©e de 15 jours seraient indĂ©pendantes des communautĂ©s symbiotiques. Mots clĂ© : Tridacna maxima, bĂ©nitier, PolynĂ©sie française, diversitĂ© gĂ©nĂ©tique, stress thermique, Ă©tude intĂ©grĂ©e, transcriptomique, mĂ©tabolomique, Symbiodinium

    Genetic diversity of giant clams (Tridacna maxima) in French Polynesia and response to thermal stress : An integrated approach to functional genomics

    No full text
    Les bĂ©nitiers font partie des espĂšces protĂ©gĂ©es, mais l’espĂšce Tridacna maxima reste encore trĂšs prĂ©sente en PolynĂ©sie française. L’étude de sa structure gĂ©nĂ©tique a permis de caractĂ©riser pour la premiĂšre fois une lignĂ©e monophylĂ©tique de bĂ©nitiers en PolynĂ©sie Française, composĂ©e de deux clades distincts rĂ©partis de part et d’autre d’un axe nord-ouest/sud-est sĂ©parant majoritairement les populations des Tuamotu (mapiko nord) de celles des autres archipels (mapiko sud). La connectivitĂ© entre les populations des diffĂ©rentes Ăźles n’est pas cohĂ©rente avec les courants ocĂ©aniques de surface actuels en PolynĂ©sie française. Ces rĂ©sultats, et ceux obtenus sur des bĂ©nitiers provenant de Fidji et de Tonga, ont permis d’émettre des hypothĂšses sur la colonisation de la PolynĂ©sie française par les bĂ©nitiers et les facteurs qui ont influencĂ© la connectivitĂ© actuelle. PrĂ©sentant une plus faible diversitĂ© gĂ©nĂ©tique que les populations de T. maxima de la rĂ©gion Indo-Pacifique, celles de PolynĂ©sie française pourraient ĂȘtre plus vulnĂ©rables aux changements environnementaux. La capacitĂ© d’adaptation au stress des bĂ©nitiers a Ă©tĂ© Ă©tudiĂ©e par une Ă©tude intĂ©grĂ©e des variations de la composition en mĂ©tabolites et de l’expression gĂ©nique lors d’expĂ©riences de rĂ©chauffement. La composition en acides gras des bĂ©nitiers a notamment Ă©tĂ© Ă©tablie pour la premiĂšre fois lors de nos travaux, et sa variation Ă©valuĂ©e au cours du stress. Les donnĂ©es de transcriptomiques ont pour la premiĂšre fois mise Ă  jour les voies de rĂ©ponses au stress thermique chez les bĂ©nitiers dont certaines semblent corrĂ©lĂ©es aux variations observĂ©es de la composition en acide gras. L’effet de la proximitĂ© des bĂ©nitiers avec les coraux dans le milieu et l’impact d’un second type de stress supplĂ©mentaire ont Ă©galement Ă©tĂ© Ă©valuĂ©s. L’étude des Symbiodinium des bĂ©nitiers a permis de montrer que leur rĂ©sistance et leur capacitĂ© d’adaptation au stress d’une durĂ©e de 15 jours seraient indĂ©pendantes des communautĂ©s symbiotiques. Mots clĂ© : Tridacna maxima, bĂ©nitier, PolynĂ©sie française, diversitĂ© gĂ©nĂ©tique, stress thermique, Ă©tude intĂ©grĂ©e, transcriptomique, mĂ©tabolomique, Symbiodinium.Giant clams are endangered species but Tridacna maxima is still well represented in French Polynesia. Firstly, the genetic structure assessment has led to the discovery of a monophyletic group composed of two new T. maxima clades in French Polynesia which cohabite over a large area with a North-West South-East axis on either side of which, one of each clade is dominant: “North Mapiko” (Tuamotu group) and “South Mapiko” (other archipelagos group). Interconnectivity between different island giant clam populations is not consistent with the present flow of oceanic currents. These results, along with those obtained for Tongian and Fidjian samples, allowed us to suggest hypothesis regarding the giant clam colonization of French Polynesia and the factors which may have influenced the present connectivity. French Polynesian T. maxima was found to have a lower genetic diversity compared to those from Indo-Pacific region, and so considered to be relatively more vulnerable to environmental global changes. Stress adaptation capacity of giant clam was assessed by the follow-up of the metabolite composition and gene expression variations during a thermal time course experiment. Giant clam fatty acid composition was established for the first time and its variation was evaluated along the stress experiment. Impact of the thermal stress on the metabolite composition and gene expression were disclosed. Variation in fatty acids compositions was observed and linked to variation in some specific gene expression. Impact of giant clam proximity with corals and impact of a second supplementary applied stress were also assessed. Study of Symbiodinium symbiosis with giant clam showed that giant clam resistance and adaptation capacity observed for 15 days was independent of symbiotic community behavior. Key words : Tridacna maxima, giant clam, French Polynesia, genetic diversity, thermal stress, integrative approach, transcriptomic, metabolomic, Symbiodinium

    Feuilles D'Album Pour Piano

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    FEUILLES D'ALBUM POUR PIANO Feuilles D'Album Pour Piano ([1]) Titelseite ([1]) Noten (1

    Existence of two novel and non-sectorized clades of the giant clam Tridacna maxima in French Polynesia: implications for connectivity and origin

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    Giant clams are widely depleted with the exception of French Polynesia, where the dominant species, Tridacna maxima, is still exploited. Here, we report the first genetic structure analysis of T. maxima samples, issued from 4 polynesian archipelagos and spread on a surface of about 4 millions square kilometers. This study was based on both mitochondrial (COI and 16S) and nuclear (18S) sequences and led to the discovery of two new T. maxima clades, which diverged 1.5 millions of years before present. French Polynesian clades cohabite over a large area with a North-West South-East axis on either side of which, one of each clade is dominant. Contrary to the strong genetic structuration observed in the T. maxima population in Indo- and West Pacific, we show here that the populations are widely interconnected, except in Tuamotu archipelago. This is underlined by a high connectivity between distant islands and archipelagos, which is independent from the direction of the oceanic currents. Altogether our data bring growing evidences of a progression of both clades in French Polynesia, one south and one north

    Changes in fatty acid composition in the giant clam Tridacna maxima in response to thermal stress

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    International audienceTemperature can modify membrane fluidity and thus affects cellular functions and physiological activities. This study examines lipid remodelling in the marine symbiotic organism, Tridacna maxima, during a time series of induced thermal stress, with an emphasis on the morphology of their symbiont Symbiodinium. First, we show that the French Polynesian giant clams harbour an important proportion of saturated fatty acids (SFA), which reflects their tropical location. Second, in contrast to most marine organisms, the total lipid content in giant clams remained constant under stress, though some changes in their composition were shown. Third, the stress-induced changes in fatty acid (FA) diversity were accompanied by an upregulation of genes involved in lipids and ROS pathways. Finally, our microscopic analysis revealed that for the giant clam's symbiont, Symbiodinium, thermal stress led to two sequential cell death processes. Our data suggests that the degradation of Symbiodinium cells could provide an additional source of energy to T. maxima in response to heat stress

    Dimethylsulfoniopropionate concentration in coral reef invertebrates varies according to species assemblages

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    International audienceDimethylsulfoniopropionate (DMSP) is a key compound in the marine sulfur cycle, and is produced in large quantities in coral reefs. In addition to Symbiodiniaceae, corals and associated bacteria have recently been shown to play a role in DMSp metabolism. numerous ecological studies have focused on DMSP concentrations in corals, which led to the hypothesis that increases in DMSP levels might be a general response to stress. Here we used multiple species assemblages of three common Indo-Pacific holobionts, the scleractinian corals Pocillopora damicornis and Acropora cytherea, and the giant clam Tridacna maxima and examined the DMSP concentrations associated with each species within different assemblages and thermal conditions. Results showed that the concentration of DMSp in A. cytherea and T. maxima is modulated according to the complexity of species assemblages. to determine the potential importance of symbiotic dinoflagellates in DMSP production, we then explored the relative abundance of Symbiodiniaceae clades in relation to DMSP levels using metabarcoding, and found no significant correlation between these factors. Finally, this study also revealed the existence of homologs involved in DMSP production in giant clams, suggesting for the first time that, like corals, they may also contribute to DMSP production. Taken together, our results demonstrated that corals and giant clams play important roles in the sulfur cycle. Because DMSp production varies in response to specific species-environment interactions, this study offers new perspectives for future global sulfur cycling research

    Insights into the genetic makeup of French Polynesian peripheral populations of the small giant clam Tridacna maxima

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    The small giant clam, Tridacna maxima, is distributed from the Red Sea and East African coast to French Polynesia. Across this widespread Indo‐Pacific range, T. maxima shows strong population structure, in agreement with its limited dispersal abilities. Peripheral populations may have smaller effective population sizes, increasing their vulnerability under any environmental changes. Understanding evolutionary processes at play in such regions located at the edges of T. maxima distribution is a prerequisite in the context of transfers and restocking programmes. In this study, giant clams were sampled from 14 atolls and islands within four archipelagos in the peripheral region of French Polynesia, in 2001–2002 and/or in 2012–2013, then genotyped at the COI gene and at nine microsatellite loci. Mitochondrial lineages of T. maxima from French Polynesia diverged from those sampled in Micronesia, Melanesia, the Coral Triangle and the Red Sea by 6.6–7.3%. Within French Polynesia, significant genetic structure was found, indicating restricted gene flow, and it was stable through time. Most of the genetic variation at microsatellite loci was between archipelagos. The most differentiated archipelago was the most geographically isolated (the Austral Islands). The current patterns of genetic structuring of T. maxima in French Polynesia probably result from long‐term genetic isolation with limited dispersal ability. In addition, these results underlined that sufficiently large populations of T. maxima have persisted in the Central Pacific during the last sea‐level regression. Strategies to optimize transfers and restocking programmes should be designed to preserve the genetic diversity and structure observed here, to avoid the risks of altering the genetic structure, allele loss and/or introduction of maladapted alleles in the receiving populations
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