885 research outputs found
Domestic UK retrofit challenge: Barriers, incentives and current performance leading into the green deal
Copyright @ 2012 Elsevier - The official published version can be accessed from the link below.This paper reviews the thermal performance of the existing UK housing stock, the main fabric efficiency incentive schemes and the barriers to obtaining deep energy and CO2 savings throughout the stock. The UK faces a major challenge to improve the thermal performance of its existing housing stock. Millions of dwellings possess âhard-to-treatâ solid walls and have glazing which is not cost effective to improve. A range of fabric efficiency incentive schemes exist, but many do not target the full range of private and social housing. From now on, the Green Deal will be the UK's key energy efficiency policy. However, the scheme is forecasted to have low consumer appeal and low incentives for investors. Moreover, calculated Green Deal loan repayments will be reliant upon estimated energy savings, yet it is claimed that retrofit measures may only be half as effective as anticipated due to a lack of monitoring, poor quality installation and the increased use of heating following refurbishment. Looking to Germany, there has been success through the Passivhaus standard, but the UK currently lacks appropriate skills and cost effective components to replicate this approach. In addition, the embodied energy in retrofit products and materials threatens to counter operational savings.This study is funded by the EPSRC, Brunel University and Buro Happold Ltd
Adaptive high-order finite element solution of transient elastohydrodynamic lubrication problems
This article presents a new numerical method to solve transient line contact elastohydrodynamic lubrication (EHL) problems. A high-order discontinuous Galerkin (DG) finite element method is used for the spatial discretization, and the standard Crank-Nicolson method is employed to approximate the time derivative. An h-adaptivity method is used for grid adaptation with the time-stepping, and the penalty method is employed to handle the cavitation condition.
The roughness model employed here is a simple indentation, which is located on the upper surface. Numerical results are presented comparing the DG method to standard finite difference (FD) techniques. It is shown that micro-EHL features are captured with far fewer degrees of freedom than when using low-order FD methods
Touching proteins with virtual bare hands : visualizing proteinâdrug complexes and their dynamics in self-made virtual reality using gaming hardware
The ability to precisely visualize the atomic geometry of the interactions between a drug and its protein target in structural models is critical in predicting the correct modifications in previously identified inhibitors to create more effective next generation drugs. It is currently common practice among medicinal chemists while attempting the above to access the information contained in three-dimensional structures by using two-dimensional projections, which can preclude disclosure of useful features. A more accessible and intuitive visualization of the three-dimensional configuration of the atomic geometry in the models can be achieved through the implementation of immersive virtual reality (VR). While bespoke commercial VR suites are available, in this work, we present a freely available software pipeline for visualising protein structures through VR. New consumer hardware, such as the HTC Vive and the Oculus Rift utilized in this study, are available at reasonable prices. As an instructive example, we have combined VR visualization with fast algorithms for simulating intramolecular motions of protein flexibility, in an effort to further improve structure-led drug design by exposing molecular interactions that might be hidden in the less informative static models. This is a paradigmatic test case scenario for many similar applications in computer-aided molecular studies and design
Multilocus sequence types of invasive Corynebacterium diphtheriae isolated in the Rio de Janeiro urban area, Brazil
Invasive infections caused by Corynebacterium diphtheriae in vaccinated and non-vaccinated individuals have been reported increasingly. In this study we used multilocus sequence typing (MLST) to study genetic relationships between six invasive strains of this bacterium isolated solely in the urban area of Rio de Janeiro, Brazil, during a 10-year period. Of note, all the strains rendered negative results in PCR reactions for the tox gene, and four strains presented an atypical sucrose-fermenting ability. Five strains represented new sequence types. MLST results did not support the hypothesis that invasive (sucrose-positive) strains of C. diphtheriae are part of a single clonal complex. Instead, one of the main findings of the study was that such strains can be normally found in clonal complexes with strains related to non-invasive disease. Comparative analyses with C. diphtheriae isolated in different countries provided further information on the geographical circulation of some sequence types
Oxidation of tertiary amine-derivatized surfaces to control protein adhesion
Selective oxidation of omega-tertiary amine self-assembled thiol monolayers to tertiary amine N-oxides is shown to transform the adhesion of model proteins lysozyme and fibrinogen upon them. Efficient preparation of both secondary and tertiary linker amides as judged by X-ray photoelectron spectroscopy (XPS) and water droplet contact angle was achieved with an improved amide bond formation on gold quartz crystal microbalance (QCM) sensors using 2-(1H-7-azabenzotriazol-1-yl)-1,1,3,3-tetramethyl hexafluorophosphate methanaminium uronium (HATU). Oxidation with hydrogen peroxide was similarly assessed, and adhesion of lysozyme and fibrinogen from phosphate buffered saline was then assayed by QCM and imaged by AFM. Tertiary amine-functionalized sensors adsorbed multilayers of aggregated lysozyme, whereas tertiary amine N-oxides and triethylene glycol-terminated monolayers are consistent with small protein aggregates. The surface containing a dimethylamine N-oxide headgroup and ethyl secondary amide linker showed the largest difference in adsorption of both proteins. Oxidation of tertiary amine decorated surfaces therefore holds the potential for selective deposition of proteins and cells through masking and other patterning techniques
The Role of Solid Friction in the Sedimentation of Strongly Attractive Colloidal Gels
We study experimentally and theoretically the sedimentation of gels made of
strongly aggregated colloidal particles, focussing on the long time behavior,
when mechanical equilibrium is asymptotically reached. The asymptotic gel
height is found to vary linearly with the initial height, a finding in stark
contrast with a recent study on similar gels [Manley \textit{et al.} 2005
\textit{Phys. Rev. Lett.} \textbf{94} 218302]. We show that the asymptotic
compaction results from the balance between gravity pull, network elasticity,
and solid friction between the gel and the container walls. Based on these
ingredients, we propose a simple model to account for the dependence of the
height loss on the initial height and volume fraction. As a result of our
analysis, we show that the static friction coefficient between the gel and the
container walls strongly depends on volume fraction: the higher the volume
fraction, the weaker the solid friction. This nonintuitive behavior is
explained using simple scaling arguments.Comment: 13 pages, 5 figures. Submitted to JSTA
Environmental sustainability of cellulose-supported solid ionic liquids for CO2 capture
Solid ionic liquids (SoILs) with cellulose as a support have been demonstrated recently to be effective and low-cost sorbents for CO2 capture. However, at present it is not clear whether they remove more CO2 than is released in the rest of the life cycle, including their manufacture, regeneration and disposal. It is also unknown what other impacts they may have over the whole life cycle while attempting to mitigate climate change. Therefore, this study evaluates for the first time the life cycle environmental sustainability of cellulose-supported SoILs in comparison with unsupported SoILs and some other sorbents. Four SoILs are assessed for 11 life cycle impacts, including global warming potential (GWP), with and without the cellulose support: methyltrioctyl ammonium acetate ([N1888][Ac]), tetraethyl ammonium acetate ([N4444][Ac]), tetra-octylammonium bromide ([N8888]Br) and 1-butyl-4-methylimidazolium bromide ([Bmim]Br). They are compared with one of the ILs in the liquid state (trihexyltetradecylphosphonium 1,2,4-triazolide ([P66614][124Triz])) and with three conventional sorbents: monoethanolamine (MEA), zeolite powder and activated carbon. The results show that SoILs with cellulose loading in the range of 70%â80 wt% have better environmental performance per unit mass of CO2 captured than the unsupported SoILs. The net removal of CO2 eq. over the life cycle ranges from 20% for pure [Bmim]Br to 83% for [N1888][Ac] with 75% cellulose and for [N4444][Ac] with both 75% and 80% loadings. However, pure [N8888]Br generates three times more CO2 eq. over the life cycle than it removes. Among the SoILs, [N4444][Ac] with 80% cellulose has the lowest life cycle impacts for eight out of 11 categories. When compared to the conventional sorbents, it has significantly higher impacts, including GWP. However, it is more sustainable than [P66614][124Triz]. The results of this study can be used to target the hotspots and improve the environmental performance of cellulose-supported SoILs through sustainable design
AMR policy dialogue : driving innovative solutions for antimicrobial discovery
Antimicrobial resistance (AMR) is a global strategic priority and sits within the UK Governmentâs National Risk Register. By 2050, AMR is predicted to cause 10 million deaths, more than cancer. In 2019 alone, there were an estimated 4.95 million deaths associated with bacterial AMR. Although global pharmaceutical research and development (R&D) spend continues to increase year on year, research into antimicrobial drug discovery is not currently an attractive commercial investment. This has had two major consequences: an ongoing decline of human capital for R&D in this field, and a decline over the longer term in availability of therapeutically effective antibiotics and other antimicrobial agents. Concerted and coordinated efforts are needed to translate high-level policy commitments into strategic actions for long-term funding and support for the R&D of new antimicrobials
A combined approach for comparative exoproteome analysis of Corynebacterium pseudotuberculosis
Background: Bacterial exported proteins represent key components of the host-pathogen interplay. Hence, we
sought to implement a combined approach for characterizing the entire exoproteome of the pathogenic
bacterium Corynebacterium pseudotuberculosis, the etiological agent of caseous lymphadenitis (CLA) in sheep and
goats.
Results: An optimized protocol of three-phase partitioning (TPP) was used to obtain the C. pseudotuberculosis
exoproteins, and a newly introduced method of data-independent MS acquisition (LC-MSE) was employed for
protein identification and label-free quantification. Additionally, the recently developed tool SurfG+ was used for in
silico prediction of sub-cellular localization of the identified proteins. In total, 93 different extracellular proteins of
C. pseudotuberculosis were identified with high confidence by this strategy; 44 proteins were commonly identified
in two different strains, isolated from distinct hosts, then composing a core C. pseudotuberculosis exoproteome.
Analysis with the SurfG+ tool showed that more than 75% (70/93) of the identified proteins could be predicted as
containing signals for active exportation. Moreover, evidence could be found for probable non-classical export of
most of the remaining proteins.
Conclusions: Comparative analyses of the exoproteomes of two C. pseudotuberculosis strains, in addition to
comparison with other experimentally determined corynebacterial exoproteomes, were helpful to gain novel
insights into the contribution of the exported proteins in the virulence of this bacterium. The results presented
here compose the most comprehensive coverage of the exoproteome of a corynebacterial species so far
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