The Abacus Cosmos: A Suite of Cosmological N-body Simulations

We present a public data release of halo catalogs from a suite of 125 cosmological $N$-body simulations from the Abacus project. The simulations span 40 $w$CDM cosmologies centered on the Planck 2015 cosmology at two mass resolutions, $4\times 10^{10}\;h^{-1}M_\odot$ and $1\times 10^{10}\;h^{-1}M_\odot$, in $1.1\;h^{-1}\mathrm{Gpc}$ and $720\;h^{-1}\mathrm{Mpc}$ boxes, respectively. The boxes are phase-matched to suppress sample variance and isolate cosmology dependence. Additional volume is available via 16 boxes of fixed cosmology and varied phase; a few boxes of single-parameter excursions from Planck 2015 are also provided. Catalogs spanning $z=1.5$ to $0.1$ are available for friends-of-friends and Rockstar halo finders and include particle subsamples. All data products are available at https://lgarrison.github.io/AbacusCosmosComment: 13 pages, 9 figures, 3 tables. Additional figures added for mass resolution convergence tests, and additional redshifts added for existing tests. Matches ApJS accepted versio

Emulating galaxy clustering and galaxy–galaxy lensing into the deeply non-linear regime: methodology, information, and forecasts

The combination of galaxy-galaxy lensing (GGL) with galaxy clustering is one of the most promising routes to determining the amplitude of matter clustering at low redshifts. We show that extending clustering+GGL analyses from the linear regime down to similar to 0.5 h(-1) Mpc scales increases their constraining power considerably, even after marginalizing over a flexible model of non-linear galaxy bias. Using a grid of cosmological N-body simulations, we construct a Taylor-expansion emulator that predicts the galaxy autocorrelation xi(gg)(r) and galaxy-matter cross-correlation xi(gm) (r) as a function of sigma(8), Omega(m), and halo occupation distribution (HOD) parameters, which are allowed to vary with large-scale environment to represent possible effects of galaxy assembly bias. We present forecasts for a fiducial case that corresponds to BOSS LOWZ galaxy clustering and SDSS-depth weak lensing (effective source density similar to 0.3 arcmin(-2)). Using tangential shear and projected correlation function measurements over 0.5 2 h(-1) Mpc, 4 h(-1) Mpc for gamma(t) , omega(p)). Much of this improvement comes from the non-linear clustering information, which breaks degeneracies among HOD parameters. Increasing the effective source density to 3 arcmin(-2) sharpens the constraint on sigma(8)Omega(0.6 )(m)by a further factor of two. With robust modelling into the non-linear regime, low-redshift measurements of matter clustering at the 1-per cent level with clustering+GGL alone are well within reach of current data sets such as those provided by the Dark Energy Survey.National Science Foundation Graduate Research Fellowship Program [DGE-1343012]; Department of Energy Computational Science Graduate Fellowship Program of the Office of Science; National Nuclear Security Administration in the Department of Energy [DE-FG02-97ER25308]; National Science Foundation [AST-1516997, AST-1313285, 1228509]; Department of Energy Office of Science grant [DOE-SC0013718]; Simons Foundation Investigator; Center for Cosmology and AstroParticle Physics at the Ohio State University; Faculty of Arts and Sciences Division of Science, Research Computing Group at Harvard UniversityThis item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]

An evaluation and comparison of conservation guidelines for an at-risk migratory songbird

For at-risk wildlife species, it is important to consider conservation within the process of adaptive management. Golden-winged Warblers (Vermivora chrysoptera) are Neotropical migratory songbirds that are experiencing long-term population declines due in part to the loss of early-successional nesting habitat. Recently-developed Golden-winged Warbler habitat management guidelines are being implemented by USDA: Natural Resource Conservation Service (2014) and its partners through the Working Lands For Wildlife (WLFW) program. During 2012–2014, we studied the nesting ecology of Golden-winged Warblers in managed habitats of the eastern US that conformed to WLFW conservation practices. We evaluated five NRCS “management scenarios” with respect to nesting success and attainment of recommended nest site vegetation conditions outlined in the Golden-winged Warbler breeding habitat guidelines. Using estimates of territory density, pairing rate, nest survival, and clutch size, we also estimated fledglingproductivity (number of fledglings/ha) for each management scenario. In general, Golden-winged Warbler nest survival declined as each breeding season advanced, but nest survival was similar across management scenarios. Within each management scenario, vegetation variables had little influence on nest survival. Still, percent Rubus cover and density of \u3e2 m tall shrubs were relevant in some management scenarios. All five management scenarios rarely attained recommended levels of nest site vegetation conditions for Golden-winged, yet nest survival was high. Fledgling productivity estimates for each management scenario ranged from 2.1 to 8.6 fledglings/10 hectares. Our results indicate that targeted habitat management for Golden-winged Warblers using a variety of management techniques on private lands has the capability to yield high nest survival and fledgling productivity, and thus have the potential to contribute to the species recovery

The role of childhood social position in adult type 2 diabetes: Evidence from the English Longitudinal Study of Ageing

Copyright @ 2014 Pikhartova et al. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.This article has been made available through the Brunel Open Access Publishing Fund.Background: Socioeconomic circumstances in childhood and early adulthood may influence the later onset of chronic disease, although such research is limited for type 2 diabetes and its risk factors at the different stages of life. The main aim of the present study is to examine the role of childhood social position and later inflammatory markers and health behaviours in developing type 2 diabetes at older ages using a pathway analytic approach. Methods. Data on childhood and adult life circumstances of 2,994 men and 4,021 women from English Longitudinal Study of Ageing (ELSA) were used to evaluate their association with diabetes at age 50 years and more. The cases of diabetes were based on having increased blood levels of glycated haemoglobin and/or self-reported medication for diabetes and/or being diagnosed with type 2 diabetes. Father's job when ELSA participants were aged 14 years was used as the measure of childhood social position. Current social characteristics, health behaviours and inflammatory biomarkers were used as potential mediators in the statistical analysis to assess direct and indirect effects of childhood circumstances on diabetes in later life. Results: 12.6 per cent of participants were classified as having diabetes. A disadvantaged social position in childhood, as measured by father's manual occupation, was associated at conventional levels of statistical significance with an increased risk of type 2 diabetes in adulthood, both directly and indirectly through inflammation, adulthood social position and a risk score constructed from adult health behaviours including tobacco smoking and limited physical activity. The direct effect of childhood social position was reduced by mediation analysis (standardised coefficient decreased from 0.089 to 0.043) but remained statistically significant (p = 0.035). All three indirect pathways made a statistically significantly contribution to the overall effect of childhood social position on adulthood type 2 diabetes. Conclusions: Childhood social position influences adult diabetes directly and indirectly through inflammatory markers, adulthood social position and adult health behaviours. © 2014Pikhartova et al.; licensee BioMed Central Ltd.Economic and Social Research Council-funded International Centre for Life Course Studies in Society and Health (RES-596-28-0001)

Soil methane sink capacity response to a long-term wildfire chronosequence in Northern Sweden

Boreal forests occupy nearly one fifth of the terrestrial land surface and are recognised as globally important regulators of carbon (C) cycling and greenhouse gas emissions. Carbon sequestration processes in these forests include assimilation of CO2 into biomass and subsequently into soil organic matter, and soil microbial oxidation of methane (CH4). In this study we explored how ecosystem retrogression, which drives vegetation change, regulates the important process of soil CH4 oxidation in boreal forests. We measured soil CH4 oxidation processes on a group of 30 forested islands in northern Sweden differing greatly in fire history, and collectively representing a retrogressive chronosequence, spanning 5000 years. Across these islands the build-up of soil organic matter was observed to increase with time since fire disturbance, with a significant correlation between greater humus depth and increased net soil CH4 oxidation rates. We suggest that this increase in net CH4 oxidation rates, in the absence of disturbance, results as deeper humus stores accumulate and provide niches for methanotrophs to thrive. By using this gradient we have discovered important regulatory controls on the stability of soil CH4 oxidation processes that could not have not been explored through shorter-term experiments. Our findings indicate that in the absence of human interventions such as fire suppression, and with increased wildfire frequency, the globally important boreal CH4 sink could be diminished