An iterative procedure to obtain inverse response functions for thick-target correction of measured charged-particle spectra

A new method for correcting charged-particle spectra for thick target effects is described. Starting with a trial function, inverse response functions are found by an iterative procedure. The variances corresponding to the measured spectrum are treated similiarly and in parallel. Oscillations of the solution are avoided by rebinning the data to finer bins during a correction iteration and back to the original or wider binning after each iteration. This thick-target correction method has been used for data obtained with the MEDLEY facility at the The Svedberg Laboratory, Uppsala, Sweden, and is here presented in detail and demonstrated for two test cases.Comment: 14 pages, 8 figures, submitted to NIM

Light-ion production in the interaction of 96 MeV neutrons with oxygen

Double-differential cross sections for light-ion (p, d, t, He-3 and alpha) production in oxygen, induced by 96 MeV neutrons are reported. Energy spectra are measured at eight laboratory angles from 20 degrees to 160 degrees in steps of 20 degrees. Procedures for data taking and data reduction are presented. Deduced energy-differential and production cross sections are reported. Experimental cross sections are compared to theoretical reaction model calculations and experimental data at lower neutron energies in the literature. The measured proton data agree reasonably well with the results of the model calculations, whereas the agreement for the other particles is less convincing. The measured production cross sections for protons, deuterons, tritons and alpha particles support the trends suggested by data at lower energies.Comment: 21 pages, 13 figures, submitted to Phys. Rev.

Nucleon-induced reactions at intermediate energies: New data at 96 MeV and theoretical status

Double-differential cross sections for light charged particle production (up to A=4) were measured in 96 MeV neutron-induced reactions, at TSL laboratory cyclotron in Uppsala (Sweden). Measurements for three targets, Fe, Pb, and U, were performed using two independent devices, SCANDAL and MEDLEY. The data were recorded with low energy thresholds and for a wide angular range (20-160 degrees). The normalization procedure used to extract the cross sections is based on the np elastic scattering reaction that we measured and for which we present experimental results. A good control of the systematic uncertainties affecting the results is achieved. Calculations using the exciton model are reported. Two different theoretical approches proposed to improve its predictive power regarding the complex particle emission are tested. The capabilities of each approach is illustrated by comparison with the 96 MeV data that we measured, and with other experimental results available in the literature.Comment: 21 pages, 28 figure

Description of the Medley Code : Monte Carlo Simulation of the Medley Setup

Neutron-induced charged-particle production, i.e., reactions like (n,xp), (n,xd), (n,xt), (n,x3He) and (n,xa), yields a large - and relatively poorly known - contribution to the dose delivered in fast-neutron cancer therapy. At the The Svedberg Laboratory (TSL) in Uppsala, a project is underway to measure these cross sections with a precision required for clinical use. For this purpose, an experimental facility, MEDLEY, is under commissioning. It consists of eight detector telescopes, each being a Si-Si-CsI detector combination. This general design has been selected because it provides reasonable performance over the very wide dynamic range required to detect particles ranging from 5 MeV a particles to 100 MeV protons. A general problem in this kind of experiments is to characterize the response of the detection system. The MEDLEY code has been developed for this purpose. Experimental studies of these kinds of charged-particle reactions show specific features. Some of these need to be optimized by means of, for instance, computer codes, prior to the measurement if good data are to be achieved. Basically, charged particles loose energy along their paths by interactions with the electrons of the material. Particles with low energy or with high specific energy loss are easily absorbed. Systems, which use thick charged-particle production targets to gain desirable count rate, can then detect only charged particles with enough energy to escape the target. Thus, using a thick target results in a degraded energy resolution, and particle losses. Thin targets are required to provide better resolution, but at the cost of low count rates. Registration of the entire energy of the particles reaching the detection system is also an ultimate goal. However, charged particles can interact with detection materials via nuclear reactions, which could result in other species of particles. From the detection point of view, the primary particles are lost and replaced by new types of particles, which may behave differently from their predecessors. It is well known that charged particles traveling in a medium are deflected by many small-angle scatterings. This so-called multiple scattering can be described with a statistical distribution. The fluctuations in energy loss per step, called energy-loss straggling, are modeled in the same way, i.e., assuming a statistical behavior. To get an acceptable neutron beam intensity, a rather thick neutron production target (2-8 mm) is required. This causes an energy spread of the incident neutron beam. In our case, the spread after a 4 mm thick 7Li target for neutron production is of the order of about 2 MeV. To analyze the data and determine the true double-differential cross sections, the above mentioned effects have to be taken into consideration. We have therefore developed a Monte Carlo code, MEDLEY, in FORTRAN language, to simulate the experimental setup taking all relevant physical characteristics into account. In the MEDLEY code, particles, chosen from a given distribution, are followed through the detection system. The particle distribution is obtained by applying a stripping method to the measured spectrum supplied by a user. When the result from the MEDLEY code is in good agreement with the experimental data, the true double-differential cross sections is obtained. If needed, the correction procedure can be iterated. This iteration is performed until the above condition is satisfied. This report presents the features included in the code, and some results. We compare ourresults with those from others where available

DESCRIPTION OF THE MEDLEY CODE: MONTE CARLO SIMULATION OF THE MEDLEY SETUP

Institutionen för medicin och vår

Description of the Medley Code : Monte Carlo Simulation of the Medley Setup

Neutron-induced charged-particle production, i.e., reactions like (n,xp), (n,xd), (n,xt), (n,x3He) and (n,xa), yields a large - and relatively poorly known - contribution to the dose delivered in fast-neutron cancer therapy. At the The Svedberg Laboratory (TSL) in Uppsala, a project is underway to measure these cross sections with a precision required for clinical use. For this purpose, an experimental facility, MEDLEY, is under commissioning. It consists of eight detector telescopes, each being a Si-Si-CsI detector combination. This general design has been selected because it provides reasonable performance over the very wide dynamic range required to detect particles ranging from 5 MeV a particles to 100 MeV protons. A general problem in this kind of experiments is to characterize the response of the detection system. The MEDLEY code has been developed for this purpose. Experimental studies of these kinds of charged-particle reactions show specific features. Some of these need to be optimized by means of, for instance, computer codes, prior to the measurement if good data are to be achieved. Basically, charged particles loose energy along their paths by interactions with the electrons of the material. Particles with low energy or with high specific energy loss are easily absorbed. Systems, which use thick charged-particle production targets to gain desirable count rate, can then detect only charged particles with enough energy to escape the target. Thus, using a thick target results in a degraded energy resolution, and particle losses. Thin targets are required to provide better resolution, but at the cost of low count rates. Registration of the entire energy of the particles reaching the detection system is also an ultimate goal. However, charged particles can interact with detection materials via nuclear reactions, which could result in other species of particles. From the detection point of view, the primary particles are lost and replaced by new types of particles, which may behave differently from their predecessors. It is well known that charged particles traveling in a medium are deflected by many small-angle scatterings. This so-called multiple scattering can be described with a statistical distribution. The fluctuations in energy loss per step, called energy-loss straggling, are modeled in the same way, i.e., assuming a statistical behavior. To get an acceptable neutron beam intensity, a rather thick neutron production target (2-8 mm) is required. This causes an energy spread of the incident neutron beam. In our case, the spread after a 4 mm thick 7Li target for neutron production is of the order of about 2 MeV. To analyze the data and determine the true double-differential cross sections, the above mentioned effects have to be taken into consideration. We have therefore developed a Monte Carlo code, MEDLEY, in FORTRAN language, to simulate the experimental setup taking all relevant physical characteristics into account. In the MEDLEY code, particles, chosen from a given distribution, are followed through the detection system. The particle distribution is obtained by applying a stripping method to the measured spectrum supplied by a user. When the result from the MEDLEY code is in good agreement with the experimental data, the true double-differential cross sections is obtained. If needed, the correction procedure can be iterated. This iteration is performed until the above condition is satisfied. This report presents the features included in the code, and some results. We compare ourresults with those from others where available

RNA transcription analysis and completion of the genome sequence of yellow head nidovirus

Yellow head virus (YHV) is a pathogen of the black tiger shrimp (Penaeus monodon) and, with gill-associated virus (GAV), is one of two known invertebrate nidoviruses. We describe sequences of the large replicase gene (ORF1a) and 5′- and 3′-terminal UTRs, completing the 26,662 nt sequence of the YHV genome. ORF1a (12,219 nt) encodes a ∼462,662 Da polypeptide containing a putative 3C-like protease and a putative papain-like protease with the canonical C/H catalytic dyad and α + β fold. The read-through pp1ab polyprotein contains putative uridylate-specific endoribonuclease and ribose-2′-O-methyl transferase domains, and an exonuclease domain incorporating unusual dual Zn-binding fingers. Upstream of ORF1a, the 71 nt 5′-UTR shares 82.4% identity with the 68 nt 5′-UTR of GAV. The 677 nt 3′-terminal region contains a single 60 nt ORF, commencing 298 nt downstream of ORF3, that is identical to N-terminal coding region of the 249 nt GAV ORF4. Northern blots using RNA from YHV-infected shrimp and probes directed at ORF1a, ORF1b, ORF2 and ORF3 identified a nested set of 3′-coterminal RNAs comprising the full-length genomic RNA and two sub-genomic (sg) mRNAs. Intergenic sequences upstream of ORF2 and ORF3 share high identity with GAV, particularly in the conserved domains predicted to mediate sgmRNA transcription. Crow