464 research outputs found
Phylogenetics of Archerfishes (Toxotidae) and Evolution of the Toxotid Shooting Apparatus
A grant from the One-University Open Access Fund at the University of Kansas was used to defray the author's publication fees in this Open Access journal. The Open Access Fund, administered by librarians from the KU, KU Law, and KUMC libraries, is made possible by contributions from the offices of KU Provost, KU Vice Chancellor for Research & Graduate Studies, and KUMC Vice Chancellor for Research. For more information about the Open Access Fund, please see http://library.kumc.edu/authors-fund.xml.Archerfishes (Toxotidae) are variously found in the fresh- and brackish-water environments of Asia Pacific and are well known for their ability to shoot water at terrestrial prey. These shots of water are intended to strike their prey and cause it to fall into the water for capture and consumption. While this behavior is well known, there are competing hypotheses (blowpipe vs. pressure tank hypothesis) of how archerfishes shoot and which oral structures are involved. Current understanding of archerfish shooting structures is largely based on two species, Toxotes chatareus and T. jaculatrix. We do not know if all archerfishes possess the same oral structures to shoot water, if anatomical variation is present within these oral structures, or how these features have evolved. Additionally, there is little information on the evolution of the Toxotidae as a whole, with all previous systematic works focusing on the interrelationships of the family. We first investigate the limits of archerfish species using new and previously published genetic data. Our analyses highlight that the current taxonomy of archerfishes does not conform to the relationships we recover. Toxotes mekongensis and T. siamensis are placed in the synonymy of T. chatareus, Toxotes carpentariensis is recognized as a species and removed from the synonymy of T. chatareus, and the genus Protoxotes is recognized for T. lorentzi based on the results of our analyses. We then take an integrative approach, using a combined analysis of discrete hard- and soft-tissue morphological characters with genetic data, to construct a phylogeny of the Toxotidae. Using the resulting phylogenetic hypothesis, we then characterize the evolutionary history and anatomical variation within the archerfishes. We discuss variation in the oral structures and the evolution of the mechanism with respect to the interrelationships of archerfishes, and find that the oral structures of archerfishes support the blowpipe hypothesis but soft-tissue oral structures may also play a role in shooting. Finally, by comparing the morphology of archerfishes to their sister group, we find that the Leptobramidae has relevant shooting features in the oral cavity, suggesting that some components of the archerfish shooting mechanism are examples of co-opted or exapted traits
Accuracy and Limitations of Fitting and Stereoscopic Methods to Determine the Direction of Coronal Mass Ejections from Heliospheric Imagers Observations
Using data from the Heliospheric Imagers (HIs) onboard STEREO, it is possible
to derive the direction of propagation of coronal mass ejections (CMEs) in
addition to their speed with a variety of methods. For CMEs observed by both
STEREO spacecraft, it is possible to derive their direction using simultaneous
observations from the twin spacecraft and also, using observations from only
one spacecraft with fitting methods. This makes it possible to test and compare
different analyses techniques. In this article, we propose a new fitting method
based on observations from one spacecraft, which we compare to the commonly
used fitting method of Sheeley et al. (1999). We also compare the results from
these two fitting methods with those from two stereoscopic methods, focusing on
12 CMEs observed simultaneously by the two STEREO spacecraft in 2008 and 2009.
We find evidence that the fitting method of Sheeley et al. (1999) can result in
significant errors in the determination of the CME direction when the CME
propagates outside of 60deg \pm 20 deg from the Sun-spacecraft line. We expect
our new fitting method to be better adapted to the analysis of halo or limb
CMEs with respect to the observing spacecraft. We also find some evidence that
direct triangulation in the HI fields-of-view should only be applied to CMEs
propagating approximatively towards Earth (\pm 20deg from the Sun-Earth line).
Last, we address one of the possible sources of errors of fitting methods: the
assumption of radial propagation. Using stereoscopic methods, we find that at
least seven of the 12 studied CMEs had an heliospheric deflection of less than
20deg as they propagated in the HI fields-of-view, which, we believe, validates
this approximation.Comment: 17 pages, 6 figures, 2 tables, accepted to Solar Physic
Solitons of two-component Bose-Einstein condensates modulated in space and time
In this paper we present soliton solutions of two coupled nonlinear
Schodinger equations modulated in the bspace and time. The approach allows us
to obatin solitons with large variety of solutions depending on the
nonlinearity and the potential profiles. As examples we show three cases with
soliton solution in such system, one of them with potential varying between
repulsive and attractive behavior and the others with nonlinearity localized
and delocalized, respectively.Comment: 18 pages, 8 figure
Microphysics of SO(10) Cosmic Strings
We uncover a rich microphysical structure for SO(10) cosmic strings. For the
abelian string the electroweak symmetry is restored around it in a region
depending on the electroweak scale. A rich structure of nonabelian strings is
found. Some of these also restore the electroweak symmetry. We investigate the
zero mode structure of our strings. Whilst there are right handed neutrino zero
modes for the abelian string, they do not survive the electroweak phase
transition. In general the nonabelian strings do not have fermion zero modes.
We consider the generalisation of our results to other theories and consider
cosmological consequences of them.Comment: 34 pages, LATEX. Replaced version is restructured, and has small
correction to fermion zero mode analysis. To be published in Physical Review
Scattering off an SO(10) cosmic string
The scattering of fermions from the abelian string arising during the phase
transition induced by the Higgs in the
126 representation is studied. Elastic cross-sections and baryon number
violating cross-sections due to the coupling to gauge fields in the core of the
string are computed by both a first quantised method and a perturbative second
quantised method. The elastic cross-sections are found to be Aharonov-Bohm
type. However, there is a marked asymmetry between the scattering
cross-sections for left and right handed fields. The catalysis cross-sections
are small, depending on the grand unified scale. If cosmic strings were
observed our results could help tie down the underlying gauge group.Comment: 20 page
Stealth Branes
We discuss the brane world model of Dvali, Gabadadze and Porrati in which
branes evolve in an infinite bulk and the brane curvature term is added to the
action. If Z_2 symmetry between the two sides of the brane is not imposed, we
show that the model admits the existence of "stealth branes" which follow the
standard 4D internal evolution and have no gravitational effect on the bulk
space. Stealth branes can nucleate spontaneosly in a Minkowski bulk. This
process is described by the standard 4D quantum cosmology formalism with
tunneling boundary conditions for the brane world wave function. The notorious
ambiguity in the choice of boundary conditions is fixed in this case due to the
presence of the embedding spacetime. We also point to some problematic aspects
of models admitting stealth brane solutions.Comment: 24 pages; Final version, to appear in Phys. Rev. D. The discussion of
"embeddability obstruction" is removed (thanks to Takahiro Tanaka who
convinced us that there is no such obstruction
First-principles extrapolation method for accurate CO adsorption energies on metal surfaces
We show that a simple first-principles correction based on the difference
between the singlet-triplet CO excitation energy values obtained by DFT and
high-level quantum chemistry methods yields accurate CO adsorption properties
on a variety of metal surfaces.
We demonstrate a linear relationship between the CO adsorption energy and the
CO singlet-triplet splitting, similar to the linear dependence of CO adsorption
energy on the energy of the CO 2* orbital found recently {[Kresse {\em et
al.}, Physical Review B {\bf 68}, 073401 (2003)]}. Converged DFT calculations
underestimate the CO singlet-triplet excitation energy ,
whereas coupled-cluster and CI calculations reproduce the experimental . The dependence of on is used
to extrapolate for the top, bridge and hollow sites for the
(100) and (111) surfaces of Pt, Rh, Pd and Cu to the values that correspond to
the coupled-cluster and CI value. The correction
reproduces experimental adsorption site preference for all cases and obtains
in excellent agreement with experimental results.Comment: Table sent as table1.eps. 3 figure
Rate-equation calculations of the current flow through two-site molecular device and DNA-based junction
Here we present the calculations of incoherent current flowing through the
two-site molecular device as well as the DNA-based junction within the
rate-equation approach. Few interesting phenomena are discussed in detail.
Structural asymmetry of two-site molecule results in rectification effect,
which can be neutralized by asymmetric voltage drop at the molecule-metal
contacts due to coupling asymmetry. The results received for poly(dG)-poly(dC)
DNA molecule reveal the coupling- and temperature-independent saturation effect
of the current at high voltages, where for short chains we establish the
inverse square distance dependence. Besides, we document the shift of the
conductance peak in the direction to higher voltages due to the temperature
decrease.Comment: 12 pages, 6 figure
Magnetic Branes in Gauss-Bonnet Gravity
We present two new classes of magnetic brane solutions in
Einstein-Maxwell-Gauss-Bonnet gravity with a negative cosmological constant.
The first class of solutions yields an -dimensional spacetime with a
longitudinal magnetic field generated by a static magnetic brane. We also
generalize this solution to the case of spinning magnetic branes with one or
more rotation parameters. We find that these solutions have no curvature
singularity and no horizons, but have a conic geometry. In these spacetimes,
when all the rotation parameters are zero, the electric field vanishes, and
therefore the brane has no net electric charge. For the spinning brane, when
one or more rotation parameters are non zero, the brane has a net electric
charge which is proportional to the magnitude of the rotation parameter. The
second class of solutions yields a spacetime with an angular magnetic field.
These solutions have no curvature singularity, no horizon, and no conical
singularity. Again we find that the net electric charge of the branes in these
spacetimes is proportional to the magnitude of the velocity of the brane.
Finally, we use the counterterm method in the Gauss-Bonnet gravity and compute
the conserved quantities of these spacetimes.Comment: 17 pages, No figure, The version to be published in Phys. Rev.
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