123 research outputs found
Three--body Correlation Effects on the Spin Dynamics of Double--Exchange Ferromagnets
We present a variational calculation of the spin wave excitation spectrum of
double--exchange ferromagnets in different dimensions. Our theory recovers the
Random Phase approximation and 1/S expansion results as limiting cases and can
be used to study the intermediate exchange coupling and electron concentration
regime relevant to the manganites. In particular, we treat exactly the long
range three--body correlations between a Fermi sea electron--hole pair and a
magnon excitation and show that they strongly affect the spin dynamics in the
parameter range relevant to experiments in the manganites. The manifestations
of these correlations are many-fold. We demonstrate that they significantly
change the ferromagnetic phase boundary. In addition to a decrease in the
magnon stiffness, we obtain an instability of the ferromagnetic state against
spin wave excitations close to the Brillouin zone boundary.Within a range of
intermediate concentrations, we find a strong softening of the spin wave
dispersion as compared to the Heisenberg ferromagnet with the same stiffness,
which changes into hardening for other concentrations. We discuss the relevance
of these results to experiments in colossal magnetoresistance ferromagnets.Comment: 14 pages, 11 figures, published in Phys. Rev. B (1 figure added,
references added
Muscle and liver transcriptome characterization and genetic marker discovery in the farmed meagre, Argyrosomus regius
Meagre (Argyrosomus regius), a teleost fish of the family Sciaenidae, is part of a group of marine fish species considered new for Mediterranean aquaculture representing the larger fish cultured in the region. Meagre aquaculture started ~ 25 years ago in West Mediterranean, and the supply of juveniles has been dominated by few hatcheries. This fact has raised concerns on possible inbreeding, urging the need for genetic information on the species and for an assessment of the polymorphisms found in the genome. To that end we characterized the muscle and liver transcriptome of a pool of meagre individuals, from different families and phenotypic size, to obtain a backbone that can support future studies regarding physiology, immunology and genetics of the species. The assembled transcripts were assigned to a wide range of biological processes including growth, reproduction, metabolism, development, stress and behavior. Then, to infer its genetic diversity and provide a catalogue of markers for future use, we scanned the reconstructed transcripts for polymorphic genetic markers. Our search revealed a total of 42,933 high quality SNP and 20,581 STR markers. We found a relatively low rate of polymorphism in the transcriptome that may indicate that inbreeding has taken place. This study has led to a catalogue of genetic markers at the expressed part of the genome and has set the ground for understanding growth and other traits of interest in meagre.info:eu-repo/semantics/acceptedVersio
Linkage mapping, comparative genome analysis, and QTL detection for growth in a non-model teleost, the meagre Argyrosomus regius, using ddRAD sequencing
Meagre (Argyrosomus regius), is a benthopelagic species rapidly emerging in aquaculture, due to its low food to biomass conversion rate, good fillet yield and ease of production. Tracing a species genomic background along with describing the genetic basis of important traits can greatly influence both conservation strategies and production perspectives. In this study, we employed ddRAD sequencing of 266 fish from six F1 meagre families, to construct a high-density genetic map comprising 4529 polymorphic SNP markers. The QTL mapping analysis provided a genomic appreciation for the weight trait identifying a statistically significant QTL on linkage group 15 (LG15). The comparative genomics analysis with six teleost species revealed an evolutionarily conserved karyotype structure. The synteny observed, verified the already well-known fusion events of the three-spine stickleback genome, reinforced the evidence of reduced evolutionary distance of Sciaenids with the Sparidae family, reflected the evolutionary proximity with Dicentrarchus labrax, traced several putative chromosomal rearrangements and a prominent putative fusion event in meagre’s LG17. This study presents novel elements concerning the genome evolutionary history of a non-model teleost species recently adopted in aquaculture, starts to unravel the genetic basis of the species growth-related traits, and provides a high-density genetic map as a tool that can help to further establish meagre as a valuable resource for research and production.info:eu-repo/semantics/publishedVersio
Effects of static and dynamic femtosecond laser modifications of Ti/Zr multilayer thin films
The experimental study of the static and dynamic femtosecond laser ablation of the multilayer 15x(Ti/Zr)/Si system is reported. The layer-by-layer selective laser ablation mechanism was studied by analysis of the surface morphology and elemental composition in static single pulse irradiation in a range of pulse energy from 10 to 17 \upmu J. The selective ablations, as number of concentric circles in modified spots are increased with the pulse energy. The boundary between the circles was shown a change in the depth, comparable to the thickness of the individual layers. Changes in the elemental composition at the edges are associated with the removal of the layer by layer. The dynamic multipulse irradiation was observed via the production of lines with laser-induced periodic surface structures (LIPSS) at different laser parameters (scan velocities and laser polarization). The spatial periodicity of the formed LIPSS depends on changes in the effective number of pulses and laser polarization, as well as the nature of the material. For better interpretation of the experimental results, simulations have been conducted to explore the thermal response of the multiple layered structure 15x(Ti/Zr) after static single pulse irradiation
Homologous cloning, characterization and expression of a new halophyte phytochelatin synthase gene in Suaeda salsa
Sequencing of the Sea Lamprey (Petromyzon marinus) Genome Provides Insights into Vertebrate Evolution
Lampreys are representatives of an ancient vertebrate lineage that diverged from our own ∼500 million years ago. By virtue of this deeply shared ancestry, the sea lamprey (P. marinus) genome is uniquely poised to provide insight into the ancestry of vertebrate genomes and the underlying principles of vertebrate biology. Here, we present the first lamprey whole-genome sequence and assembly. We note challenges faced owing to its high content of repetitive elements and GC bases, as well as the absence of broad-scale sequence information from closely related species. Analyses of the assembly indicate that two whole-genome duplications likely occurred before the divergence of ancestral lamprey and gnathostome lineages. Moreover, the results help define key evolutionary events within vertebrate lineages, including the origin of myelin-associated proteins and the development of appendages. The lamprey genome provides an important resource for reconstructing vertebrate origins and the evolutionary events that have shaped the genomes of extant organisms
Phytoremediation of heavy metal-contaminated sites: Eco-environmental concerns, field studies, sustainability issues and future prospects
Environmental contamination due to heavy metals (HMs) is of serious ecotoxicological concern worldwide because of their increasing use at industries. Due to non-biodegradable and persistent nature, HMs cause serious soil/water pollution and severe health hazards in living beings upon exposure. HMs can be genotoxic, carcinogenic, mutagenic, and teratogenic in nature even at low concentration. They may also act as endocrine disruptors and induce developmental as well as neurological disorders and thus, their removal from our natural environment is crucial for the rehabilitation of contaminated sites. To cope with HM pollution, phytoremediation has emerged as a low-cost and eco-sustainable solution to conventional physico-chemical cleanup methods that require high capital investment and labor alter soil properties and disturb soil microflora. Phytoremediation is a green technology wherein plants and associated microbes are used to remediate HM-contaminated sites to safeguard the environment and protect public health. Hence, in view of the above, the present paper aims to examine the feasibility of phytoremediation as a sustainable remediation technology for the management of metals-contaminated sites. Therefore, this paper provides an in-depth review on both the conventional and novel phytoremediation approaches, evaluate their efficacy to remove toxic metals from our natural environment, explore current scientific progresses, field experiences and sustainability issues and revise world over trends in phytoremediation research for its wider recognition and public acceptance as a sustainable remediation technology for the management of contaminated sites in 21st century
Effects of salinity and drought on growth, ionic relations, compatible solutes and activation of antioxidant systems in oleander (Nerium oleander L.)
[EN] Nerium
oleander
is an
ornamental
species
of high
aesthetic
value,
grown
in arid
and
semi-
arid
regions
because
of its
drought
tolerance,
which
is also
considered
as
relatively
resistant
to salt;
yet
the
biochemical
and
molecular
mechanisms
underlying
oleander¿s
stress
toler-
ance
remain
largely
unknown.
To
investigate
these
mechanisms,
one-year-old
oleander
seedlings
were
exposed
to 15
and
30
days
of treatment
with
increasing
salt
concentratio
ns,
up
to 800
mM
NaCl,
and
to complete
withholding
of irrigation;
growth
parameters
and
bio-
chemical
markers
characteristic
of conserved
stress-response
pathways
were
then
deter-
mined
in stressed
and
control
plants.
Strong
water
deficit
and
salt
stress
both
caused
inhibition
of growth,
degradation
of photosynthetic
pigments,
a slight
(but
statistically
signifi-
cant)
increase
in the
leaf
levels
of specific
osmolytes,
and
induction
of oxidative
stress¿as
indicated
by
the
accumulation
of malondialdehyde
(MDA),
a reliable
oxidative
stress
marker
¿accompanied
by
increases
in the
levels
of total
phenolic
compounds
and
antioxidant
fla-
vonoids
and
in the
specific
activities
of ascorbate
peroxidase
(APX)
and
glutathione
reduc-
tase
(GR).
High
salinity,
in addition,
induced
accumulation
of Na
+
and
Cl
-
in roots
and
leaves
and
the
activation
of superoxide
dismutase
(SOD)
and
catalase
(CAT)
activities.
Apart
from
anatomical
adaptations
that
protect
oleander
from
leaf
dehydration
at moderate
levels
of
stress,
our
results
indicate
that
tolerance
of this
species
to salinity
and
water
deficit
is based
on
the
constitutive
accumulation
in leaves
of high
concentratio
ns
of soluble
carbohydrates
and,
to a lesser
extent,
of glycine
betaine,
and
in the
activation
of the
aforementioned
antiox-
idant
systems.
Moreover,
regarding
specifically
salt
stress,
mechanisms
efficiently
blocking
transport
of toxic
ions
from
the
roots
to the
aerial
parts
of the
plant
appear
to contribute
to a
large
extent
to tolerance
in
Nerium
oleanderThis work was financed by internal funds of the Polytechnic University of Valencia to Monica Boscaiu and Oscar Vicente. Dinesh Kumar’s stay in Valencia was financed by a NAMASTE fellowship from the European Union, and Mohamad Al Hassan was a recipient of an Erasmus Mundus pre-doctoral scholarship financed by the European Commission (Welcome Consortium).Kumar, D.; Al Hassan, M.; Naranjo Olivero, MA.; Agrawal, V.; Boscaiu, M.; Vicente, O. (2017). Effects of salinity and drought on growth, ionic relations, compatible solutes and activation of antioxidant systems in oleander (Nerium oleander L.). PLoS ONE. 12(9). doi:10.1371/journal.pone.0185017Se018501712
Complete depletion of primordial germ cells in an All-female fish leads to Sex-biased gene expression alteration and sterile All-male occurrence
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