Evidence for behavioural interventions addressing condom use fit and feel issues to improve condom use : A Systematic Review

© CSIRO 2019. Open Access Article (CC BY-NC-ND)Continuing high rates of sexually transmissible infections (STIs) in many countries highlight the need to identify effective behavioural interventions. Consistent and correct use of male condoms is a key strategy for the prevention of STIs. However, some men report problems with condom fit (e.g. the size and shape of the condom) and feel (e.g. tightness, irritation, sensitivity), which inhibits their use. We conducted a systematic review to identify existing interventions addressing condom use fit and feel problems. We searched electronic databases for peer-reviewed articles and searched reference lists of retrieved studies. Five studies met the inclusion criteria. These were generally small-scale pilot studies evaluating behavioural interventions to promote safer sex with men aged under 30 years, addressing, among other things, barriers to condom use relating to fit and feel. There were significant increases in the reported use of condoms, including condom use with no errors and problems. Improvements in some condom use mediators were reported, such as condom use self-efficacy, knowledge, intentions and condom use experience. There were mixed findings in terms of the ability of interventions to reduce STI acquisition. Behavioural interventions addressing condom fit and feel are promising in terms of effectiveness but require further evaluation.Peer reviewe

Allelic spectrum of the natural variation in CRP

With the recent completion of the International HapMap Project, many tools are in hand for genetic association studies seeking to test the common variant/common disease hypothesis. In contrast, very few tools and resources are in place for genotype–phenotype studies hypothesizing that rare variation has a large impact on the phenotype of interest. To create these tools for rare variant/common disease studies, much interest is being generated towards investing in re-sequencing either large sample sizes of random chromosomes or smaller sample sizes of patients with extreme phenotypes. As a case study for rare variant discovery in random chromosomes, we have re-sequenced ~1,000 chromosomes representing diverse populations for the gene C-reactive protein (CRP). CRP is an important gene in the fields of cardiovascular and inflammation genetics, and its size (~2 kb) makes it particularly amenable medical or deep re-sequencing. With these data, we explore several issues related to the present-day candidate gene association study including the benefits of complete SNP discovery, the effects of tagSNP selection across diverse populations, and completeness of dbSNP for CRP. Also, we show that while deep re-sequencing uncovers potentially medically relevant coding SNPs, these SNPs are fleetingly rare when genotyped in a population-based survey of 7,000 Americans (NHANES III). Collectively, these data suggest that several different types re-sequencing and genotyping approaches may be required to fully understand the complete spectrum of alleles that impact human phenotypes. ELECTRONIC SUPPLEMENTARY MATERIAL: Supplementary material is available for this article at http://dx.doi.org/10.1007/s00439-006-0160-y and is accessible for authorized users

Variation in LPA Is Associated with Lp(a) Levels in Three Populations from the Third National Health and Nutrition Examination Survey

The distribution of lipoprotein(a) [Lp(a)] levels can differ dramatically across diverse racial/ethnic populations. The extent to which genetic variation in LPA can explain these differences is not fully understood. To explore this, 19 LPA tagSNPs were genotyped in 7,159 participants from the Third National Health and Nutrition Examination Survey (NHANES III). NHANES III is a diverse population-based survey with DNA samples linked to hundreds of quantitative traits, including serum Lp(a). Tests of association between LPA variants and transformed Lp(a) levels were performed across the three different NHANES subpopulations (non-Hispanic whites, non-Hispanic blacks, and Mexican Americans). At a significance threshold of p<0.0001, 15 of the 19 SNPs tested were strongly associated with Lp(a) levels in at least one subpopulation, six in at least two subpopulations, and none in all three subpopulations. In non-Hispanic whites, three variants were associated with Lp(a) levels, including previously known rs6919246 (p = 1.18×10−30). Additionally, 12 and 6 variants had significant associations in non-Hispanic blacks and Mexican Americans, respectively. The additive effects of these associated alleles explained up to 11% of the variance observed for Lp(a) levels in the different racial/ethnic populations. The findings reported here replicate previous candidate gene and genome-wide association studies for Lp(a) levels in European-descent populations and extend these findings to other populations. While we demonstrate that LPA is an important contributor to Lp(a) levels regardless of race/ethnicity, the lack of generalization of associations across all subpopulations suggests that specific LPA variants may be contributing to the observed Lp(a) between-population variance

Large sub-regional differences of ammonia seasonal patterns over India reveal inventory discrepancies

International audienceAmmonia (NH3) is a key precursor of haze particles and fine particulate matter (PM2.5) and its spatiotemporal variabilities are poorly constrained. In this study, we present measurements of NH3 over the Indian subcontinent region from the Infrared Atmospheric Sounder Interferometer (IASI) and Cross-track Infrared Sounder (CrIS) satellite instruments. This region exhibits a complex emission profile due to the number of varied sources, including crop burning, fossil fuel combustion, fertilizer application, livestock and industrial sources. Observations from the CrIS and IASI instruments are oversampled to a resolution of 0.02◦ × 0.02◦. Five regions with distinct spatiotemporal NH3 profiles are determined using k-means clustering. Maximum NH3 columns are seen in July over the western India with column densities of 6.2 × 1017 mol cm−2 and7.2 × 1017 mol cm−2 respectively for IASI and CrIS. The seasonality of measured NH3 columns show annual maxima occurring in spring in Eastern India and Bangladesh and in mid-summer for the western Indo-Gangetic plain. Our observational constraints suggest that the impact of local farming practices on NH3 emissions is not well captured in emission inventories such as Coupled Model Intercomparison Project Phase 6 (CMIP6), which exhibits peaks in the late spring and autumn. The spatial variability in the seasonal patterns of NH3 is also not captured by the single emissions profile used in CMIP6 for India. The high-resolution maps obtained from these measurements can be used to improve NH3 emission inventories in order to understand its sources for more accurate predictions of air quality in the Indian subcontinent. Our study points to the need for regionally specific emissions inventories for short-lived species such as NH3 that have heterogeneous emissions profiles due to specific agricultural practices and other emission source characteristics