Stability and slow-fast oscillation in fractional-order Belousov-Zhabotinsky reaction with two time scales

The fractional-order Belousov-Zhabotinsky (BZ) reaction with different time scales is investigated in this paper. Based on the stability theory of fractional-order differential equation, the critical condition of Hopf bifurcation with two parameters in fractional-order BZ reaction is discussed. By comparison of the fractional-order and integer-order systems, it is found that they will behave in different stabilities under some parameter intervals, and the parameter intervals may become larger with the variation of fractional order. Furthermore, slow-fast effect is firstly studied in fractional-order BZ reaction with two time scales coupled, and the Fold/Fold type slow-fast oscillation with jumping behavior is found, whose generation mechanism is explained by using the slow-fast dynamical analysis method. The influences of different fractional orders on the slow-fast oscillation behavior as well as the internal mechanism are both analyzed

Look-Around Before You Leap: High-Frequency Injected Transformer for Image Restoration

Transformer-based approaches have achieved superior performance in image restoration, since they can model long-term dependencies well. However, the limitation in capturing local information restricts their capacity to remove degradations. While existing approaches attempt to mitigate this issue by incorporating convolutional operations, the core component in Transformer, i.e., self-attention, which serves as a low-pass filter, could unintentionally dilute or even eliminate the acquired local patterns. In this paper, we propose HIT, a simple yet effective High-frequency Injected Transformer for image restoration. Specifically, we design a window-wise injection module (WIM), which incorporates abundant high-frequency details into the feature map, to provide reliable references for restoring high-quality images. We also develop a bidirectional interaction module (BIM) to aggregate features at different scales using a mutually reinforced paradigm, resulting in spatially and contextually improved representations. In addition, we introduce a spatial enhancement unit (SEU) to preserve essential spatial relationships that may be lost due to the computations carried out across channel dimensions in the BIM. Extensive experiments on 9 tasks (real noise, real rain streak, raindrop, motion blur, moir\'e, shadow, snow, haze, and low-light condition) demonstrate that HIT with linear computational complexity performs favorably against the state-of-the-art methods. The source code and pre-trained models will be available at https://github.com/joshyZhou/HIT.Comment: 19 pages, 7 figure

Harmonizing Light and Darkness: A Symphony of Prior-guided Data Synthesis and Adaptive Focus for Nighttime Flare Removal

Intense light sources often produce flares in captured images at night, which deteriorates the visual quality and negatively affects downstream applications. In order to train an effective flare removal network, a reliable dataset is essential. The mainstream flare removal datasets are semi-synthetic to reduce human labour, but these datasets do not cover typical scenarios involving multiple scattering flares. To tackle this issue, we synthesize a prior-guided dataset named Flare7K*, which contains multi-flare images where the brightness of flares adheres to the laws of illumination. Besides, flares tend to occupy localized regions of the image but existing networks perform flare removal on the entire image and sometimes modify clean areas incorrectly. Therefore, we propose a plug-and-play Adaptive Focus Module (AFM) that can adaptively mask the clean background areas and assist models in focusing on the regions severely affected by flares. Extensive experiments demonstrate that our data synthesis method can better simulate real-world scenes and several models equipped with AFM achieve state-of-the-art performance on the real-world test dataset

Seeing the Unseen: A Frequency Prompt Guided Transformer for Image Restoration

How to explore useful features from images as prompts to guide the deep image restoration models is an effective way to solve image restoration. In contrast to mining spatial relations within images as prompt, which leads to characteristics of different frequencies being neglected and further remaining subtle or undetectable artifacts in the restored image, we develop a Frequency Prompting image restoration method, dubbed FPro, which can effectively provide prompt components from a frequency perspective to guild the restoration model address these differences. Specifically, we first decompose input features into separate frequency parts via dynamically learned filters, where we introduce a gating mechanism for suppressing the less informative elements within the kernels. To propagate useful frequency information as prompt, we then propose a dual prompt block, consisting of a low-frequency prompt modulator (LPM) and a high-frequency prompt modulator (HPM), to handle signals from different bands respectively. Each modulator contains a generation process to incorporate prompting components into the extracted frequency maps, and a modulation part that modifies the prompt feature with the guidance of the decoder features. Experimental results on commonly used benchmarks have demonstrated the favorable performance of our pipeline against SOTA methods on 5 image restoration tasks, including deraining, deraindrop, demoir\'eing, deblurring, and dehazing. The source code and pre-trained models will be available at https://github.com/joshyZhou/FPro.Comment: 18 pages, 10 figrue

Consensus Rules in Variant Detection from Next-Generation Sequencing Data

A critical step in detecting variants from next-generation sequencing data is post hoc filtering of putative variants called or predicted by computational tools. Here, we highlight four critical parameters that could enhance the accuracy of called single nucleotide variants and insertions/deletions: quality and deepness, refinement and improvement of initial mapping, allele/strand balance, and examination of spurious genes. Use of these sequence features appropriately in variant filtering could greatly improve validation rates, thereby saving time and costs in next-generation sequencing projects

PDANet: Polarity-consistent Deep Attention Network for Fine-grained Visual Emotion Regression

Existing methods on visual emotion analysis mainly focus on coarse-grained emotion classification, i.e. assigning an image with a dominant discrete emotion category. However, these methods cannot well reflect the complexity and subtlety of emotions. In this paper, we study the fine-grained regression problem of visual emotions based on convolutional neural networks (CNNs). Specifically, we develop a Polarity-consistent Deep Attention Network (PDANet), a novel network architecture that integrates attention into a CNN with an emotion polarity constraint. First, we propose to incorporate both spatial and channel-wise attentions into a CNN for visual emotion regression, which jointly considers the local spatial connectivity patterns along each channel and the interdependency between different channels. Second, we design a novel regression loss, i.e. polarity-consistent regression (PCR) loss, based on the weakly supervised emotion polarity to guide the attention generation. By optimizing the PCR loss, PDANet can generate a polarity preserved attention map and thus improve the emotion regression performance. Extensive experiments are conducted on the IAPS, NAPS, and EMOTIC datasets, and the results demonstrate that the proposed PDANet outperforms the state-of-the-art approaches by a large margin for fine-grained visual emotion regression. Our source code is released at: https://github.com/ZizhouJia/PDANet.Comment: Accepted by ACM Multimedia 201

Biochar has no effect on soil respiration across Chinese agricultural soils

This work was supported by NSFC (41371298 and 41371300), Ministry of Science and Technology (2013GB23600666 and 2013BAD11B00), and Ministry of Education of China (20120097130003). The international cooperation was funded under a “111” project by the State Agency of Foreign Expert Affairs of China and jointly supported under a grant for Priority Disciplines in Higher Education by the Department of Education, Jiangsu Province, China; The work was also a contribution to the cooperation project of “Estimates of Future Agricultural GHG Emissions and Mitigation in China” under the UK-China Sustainable Agriculture Innovation Network (SAIN). Pete Smith contributed to this work under a UK BBSRC China Partnership Award. The authors are grateful to Yuming Liu, Bin Zhang, Xiao Li, Gang Wu, Jinjin Qu and Yinxin Ye and Dongqi Liu for their contribution to field experiments, and to Rongjun Bian and Qaiser Hussain for their participation in discussions of the data analysis and interpretation, and to Xinyan Yu and Jiafang Wang for their assistance in lab works.Peer reviewedPostprin

Whole exome sequencing identifies frequent somatic mutations in cell-cell adhesion genes in chinese patients with lung squamous cell carcinoma

Lung squamous cell carcinoma (SQCC) accounts for about 30% of all lung cancer cases. Understanding of mutational landscape for this subtype of lung cancer in Chinese patients is currently limited. We performed whole exome sequencing in samples from 100 patients with lung SQCCs to search for somatic mutations and the subsequent target capture sequencing in another 98 samples for validation. We identified 20 significantly mutated genes, including TP53, CDH10, NFE2L2 and PTEN. Pathways with frequently mutated genes included those of cell-cell adhesion/Wnt/Hippo in 76%, oxidative stress response in 21%, and phosphatidylinositol-3-OH kinase in 36% of the tested tumor samples. Mutations of Chromatin regulatory factor genes were identified at a lower frequency. In functional assays, we observed that knockdown of CDH10 promoted cell proliferation, soft-agar colony formation, cell migration and cell invasion, and overexpression of CDH10 inhibited cell proliferation. This mutational landscape of lung SQCC in Chinese patients improves our current understanding of lung carcinogenesis, early diagnosis and personalized therapy