Mapping density, diversity and species-richness of the Amazon tree flora

Using 2.046 botanically-inventoried tree plots across the largest tropical forest on Earth, we mapped tree species-diversity and tree species-richness at 0.1-degree resolution, and investigated drivers for diversity and richness. Using only location, stratified by forest type, as predictor, our spatial model, to the best of our knowledge, provides the most accurate map of tree diversity in Amazonia to date, explaining approximately 70% of the tree diversity and species-richness. Large soil-forest combinations determine a significant percentage of the variation in tree species-richness and tree alpha-diversity in Amazonian forest-plots. We suggest that the size and fragmentation of these systems drive their large-scale diversity patterns and hence local diversity. A model not using location but cumulative water deficit, tree density, and temperature seasonality explains 47% of the tree species-richness in the terra-firme forest in Amazonia. Over large areas across Amazonia, residuals of this relationship are small and poorly spatially structured, suggesting that much of the residual variation may be local. The Guyana Shield area has consistently negative residuals, showing that this area has lower tree species-richness than expected by our models. We provide extensive plot meta-data, including tree density, tree alpha-diversity and tree species-richness results and gridded maps at 0.1-degree resolution

Consistent patterns of common species across tropical tree communities

Trees structure the Earth’s most biodiverse ecosystem, tropical forests. The vast number of tree species presents a formidable challenge to understanding these forests, including their response to environmental change, as very little is known about most tropical tree species. A focus on the common species may circumvent this challenge. Here we investigate abundance patterns of common tree species using inventory data on 1,003,805 trees with trunk diameters of at least 10 cm across 1,568 locations1,2,3,4,5,6 in closed-canopy, structurally intact old-growth tropical forests in Africa, Amazonia and Southeast Asia. We estimate that 2.2%, 2.2% and 2.3% of species comprise 50% of the tropical trees in these regions, respectively. Extrapolating across all closed-canopy tropical forests, we estimate that just 1,053 species comprise half of Earth’s 800 billion tropical trees with trunk diameters of at least 10 cm. Despite differing biogeographic, climatic and anthropogenic histories7, we find notably consistent patterns of common species and species abundance distributions across the continents. This suggests that fundamental mechanisms of tree community assembly may apply to all tropical forests. Resampling analyses show that the most common species are likely to belong to a manageable list of known species, enabling targeted efforts to understand their ecology. Although they do not detract from the importance of rare species, our results open new opportunities to understand the world’s most diverse forests, including modelling their response to environmental change, by focusing on the common species that constitute the majority of their trees

Microalgae as a potential ingredient for partial fish meal replacement in aquafeeds: nutrient stability under different storage conditions

Aquaculture provides half of the fish for human consumption, and the trend is on a significant rise over the coming decades. However, the soaring price of traditional ingredients used in aquafeeds is becoming prohibitive, especially in the case of capture fishery derivatives. Therefore, new alternative ingredients and additives are required in order to substitute fish meal and fish oil in aquaculture feeds. Microalgae are a reliable alternative to these as they are potential stabilizing agents against nutrient oxidation. In the present study, three experimental aquafeeds were elaborated with 15% microalgae biomass (Isochrysis galbana, Nannochloropsis gaditana, and Scenedesmus almeriensis); these were then stored under different temperature and light conditions for 15 months in order to analyze the stability of proteins, lipids, fatty acids, and carotenoids. The antioxidant activity of the natural pigments present in microalgae allowed frozen microalgae-based aquafeeds to maintain stable quality over 9 months of storage. Nannochloropsis- and Isochrysis-supplemented feeds had higher eicosapentaenoic and docosahexaenoic acid contents than the microalgae-free control feed. However, longer storage times led to a drop in protein and carotenoid levels

Data on the Amphidinium carterae Dn241EHU isolation and morphological and molecular characterization

We present the data corresponding to the isolation and morphological and molecular characterization of a strain of Amphidinium carterae, isolated in Mallorca Island waters and now deposited in the microalgae culture collection of the Plant Biology and Ecology Department of the University of the Basque Country under the reference Dn241Ehu. The morphological characterization was made using two different techniques of microscopy and the molecular characterization by using the 28S rDNA sequences of D1 and D2 domains. This strain has been used for a culture study in an indoor LED-lighted pilot-scale raceway to determine its production of carotenoids and fatty acids, “Long-term culture of the marine dinoflagellate microalga Amphidinium carterae in an indoor LED-lighted raceway photobioreactor: Production of carotenoids and fatty acids.” (Molina-Miras et al., 2018) [1]

Effects of dietary use of two lipid extracts from the microalga Nannochloropsis gaditana (Lubián, 1982) alone and in combination on growth and muscle composition in juvenile gilthead seabream, Sparus aurata

Microalgae are a source of diverse high-value compounds, such as carotenoids and fatty acids, which have a potential application in aquafeeds. Some microalgae species present complex cell wall structures, which make them poorly digestible, thus limiting their use as a feed ingredient. Consequently, applying extracted compounds to aquafeeds instead of using the whole algal biomass is advantageous as this is expected to increase the bioavailability of these nutrients. The aim of this study was to evaluate the effect of the dietary inclusion (2%) of two extracts obtained from the microalga Nannochloropsis gaditana (one composed of saponifiable lipids and the other of non-saponifiable lipids), alone or in combination, on growth, muscle composition, skin color and lipid oxidation in juvenile gilthead seabream, Sparus aurata, following a 39-day trial. Overall, the inclusion of 2% of the saponifiable lipid extract did not affect the growth performance but fish muscle presented a lower percentage of docosahexaenoic acid (DHA) and a higher eicosapentaenoic acid (EPA) than that of the fish fed the diets lacking this lipidic fraction. Despite no effect being observed in fish growth performance, the inclusion of 2% of the non-saponifiable lipid extract enhanced the carotenoid content of the fish muscle, which prevented lipid oxidation, and modulated the skin pigmentation towards a yellow-greenish color. The present study confirms the success of applying both high-value microalgae lipidic extracts, alone or in combination, as feed additives for practical diets in juvenile gilthead seabream

Growth performance, body composition, and digestive functionality of senegalese sole (solea senegalensis kaup, 1858) juveniles fed diets including microalgae freeze-dried biomass

Senegalese sole is one of the most promising fish species cultivated in the Southern European countries. This study was aimed at assessing the effects of microalgae biomass added to diets for Senegalese sole juveniles on fish growing and condition status. Three isoproteic (52%) and isolipidic (10%) were formulated containing 15% Tisochrysis lutea (TISO), Nannochloropsis gaditana (NAN), or Scenedesmus almeriensis (SCE) biomass, respectively. An experimental microalgae-free diet (CT) and a commercial diet (COM) were used as controls. Fish were fed at 3% of their body weight for 85 days. Final body weight of fish fed microalgae-supplemented diets did not differ from group fed CT diet. Fish-fed CT, TISO, NAN, and SCE showed higher growth performance and nutrient utilization figures than specimen-fed COM diet. The highest carcass lipid content was found in COM group (141 g kg−1 ), and no differences were observed in tein content. .....