Parallel 3-D marine controlled-source electromagnetic modelling using high-order tetrahedral Nédélec elements

We present a parallel and high-order Nédélec finite element solution for the marine controlled-source electromagnetic (CSEM) forward problem in 3-D media with isotropic conductivity. Our parallel Python code is implemented on unstructured tetrahedral meshes, which support multiple-scale structures and bathymetry for general marine 3-D CSEM modelling applications. Based on a primary/secondary field approach, we solve the diffusive form of Maxwell’s equations in the low-frequency domain. We investigate the accuracy and performance advantages of our new high-order algorithm against a low-order implementation proposed in our previous work. The numerical precision of our high-order method has been successfully verified by comparisons against previously published results that are relevant in terms of scale and geological properties. A convergence study confirms that high-order polynomials offer a better trade-off between accuracy and computation time. However, the optimum choice of the polynomial order depends on both the input model and the required accuracy as revealed by our tests. Also, we extend our adaptive-meshing strategy to high-order tetrahedral elements. Using adapted meshes to both physical parameters and high-order schemes, we are able to achieve a significant reduction in computational cost without sacrificing accuracy in the modelling. Furthermore, we demonstrate the excellent performance and quasi-linear scaling of our implementation in a state-of-the-art high-performance computing architecture.This project has received funding from the European Union's Horizon 2020 programme under the Marie Sklodowska-Curie grant agreement No. 777778. Furthermore, the research leading to these results has received funding from the European Union's Horizon 2020 programme under the ChEESE Project (https://cheese-coe.eu/ ), grant agreement No. 823844. In addition, the authors would also like to thank the support of the Ministerio de Educación y Ciencia (Spain) under Projects TEC2016-80386-P and TIN2016-80957-P. The authors would like to thank the Editors-in-Chief and to both reviewers, Dr. Martin Cuma and Dr. Raphael Rochlitz, for their valuable comments and suggestions which helped to improve the quality of the manuscript. This work benefited from the valuable suggestions, comments, and proofreading of Dr. Otilio Rojas (BSC). Last but not least, Octavio Castillo-Reyes thanks Natalia Gutierrez (BSC) for her support in CSEM modeling with BSIT.Peer ReviewedPostprint (author's final draft

Selection, tinkering and emergence in complex networks: crossing the land of tinkering

Complex biological networks have very different origins than technologic ones. The latter involve extensive design and, as engineered structures, include a high level of optimization. The former involve (in principle) contingency and structural constraints, with new structures being incorporated through tinkering with previously evolved modules or units. However, the observation of the topological features of different biological nets suggests that nature can have a limited repertoire of ”attractors” that essentially optimize communication under some basic constraints of cost and architecture or that allow the biological nets to reach a high degree of homeostasis. Conversely, the topological features exhibited by some technology graphs indicate that tinkering and internal constraints play a key role, in spite of the ”designed” nature of these structures. Previous scenarios suggested to explain the overall trends of evolution are re-analyzed in light of topological patterns.Peer ReviewedPostprint (author's final draft

Pressure and velocity distributions in plunge pools

Presented at the Protections 2016: 2nd international seminar on dam protection against overtopping: concrete dams, embankment dams, levees, tailings dams held on 7th-9th September, 2016, at Colorado State University in Fort Collins, Colorado, USA. The increasing demand for dam and levee safety and flood protection has motivated new research and advancements and a greater need for cost-effective measures in overtopping protection as a solution for overtopping concerns at levees and dams. This seminar will bring together leading experts from practice, research, development, and implementation for two days of knowledge exchange followed by a technical tour of the Colorado State University Hydraulic Laboratory with overtopping flume and wave simulator. This seminar will focus on: Critical issues related to levees and dams; New developments and advanced tools; Overtopping protection systems; System design and performance; Applications and innovative solutions; Case histories of overtopping events; Physical modeling techniques and recent studies; and Numerical modeling methods.Includes bibliographical references.When dam overtopping produces rectangular free jets that discharge into plunge pool basins below the dam, the pressure and velocity distributions of the flow in the plunge pool must be estimated to evaluate potential scour that might destabilize the dam. The high turbulence and aeration phenomena that appear in falling jets and dissipation basins make it difficult to carry out studies based only on classical methodologies. This work addresses plunge pool flows, and compares numerical results against our own experiments. Instantaneous pressures, velocities and air entrainment were obtained with the use of piezoresistive transducers, Acoustic Doppler Velocimeter and optical fiber, respectively. Mean velocity field and turbulence kinetic energy profiles were determined. To identify the level of reliability of models, numerical simulations were carried out by using the "homogeneous" model of ANSYS CFX, together with different turbulence closures. The numerical results fall fairly close to the values measured in the laboratory, and with expressions for submerged hydraulic jumps and horizontal wall jets. The observations can be well predicted for horizontal velocities greater than 40% of the maximum velocity in each profile, and when the ratio of the water cushion depth to the jet thickness is lower than 20

Futura desarrollo urbano : proyecto México Ciudad Futura

1 archivo PDF (Tipo: Presentación) : principalmente ilustraciones en color ; 61 diapositivas.Imágenes del proyecto de rescate de la ciudad lacustre, es decir, de recuperación del lago de Texcoco el cual generará un sistema de lagos contiguos e interconectados por infraestructuras urbanas. SUIUNU

Evaluation of the Role of Functional Constraints on the Integrity of an Ultraconserved Region in the Genus Drosophila

Why gene order is conserved over long evolutionary timespans remains elusive. A common interpretation is that gene order conservation might reflect the existence of functional constraints that are important for organismal performance. Alteration of the integrity of genomic regions, and therefore of those constraints, would result in detrimental effects. This notion seems especially plausible in those genomes that can easily accommodate gene reshuffling via chromosomal inversions since genomic regions free of constraints are likely to have been disrupted in one or more lineages. Nevertheless, no empirical test has been performed to this notion. Here, we disrupt one of the largest conserved genomic regions of the Drosophila genome by chromosome engineering and examine the phenotypic consequences derived from such disruption. The targeted region exhibits multiple patterns of functional enrichment suggestive of the presence of constraints. The carriers of the disrupted collinear block show no defects in their viability, fertility, and parameters of general homeostasis, although their odorant perception is altered. This change in odorant perception does not correlate with modifications of the level of expression and sex bias of the genes within the genomic region disrupted. Our results indicate that even in highly rearranged genomes, like those of Diptera, unusually high levels of gene order conservation cannot be systematically attributed to functional constraints, which raises the possibility that other mechanisms can be in place and therefore the underpinnings of the maintenance of gene organization might be more diverse than previously thought