Genetic variation in Rhabdomys pumilio (Sparrman 1784) - an allozyme study

The striped-mouse, Rhabdomys pumilio, is widely distributed throughout southern Africa. It prefers grasslands but is also found in vlei areas and dry river beds and its attraction to cultivated land has resulted in extensive damage to plants. An allozyme study of R. pumilio populations in different regions of southern Africa was undertaken to evaluate the genetic structure within and between 23 populations and to draw conclusions about the taxonomic status of populations within this species. Fifteen of the 26 loci examined were polymorphic. The mean heterozygosity (0.073) was high for a mammal, although relatively low heterozygosities (0.036–0.054) were recorded for three localities from the peninsular region of the Western Cape. The high mean value for local genetic differentiation (Fst) of 0.459 and the low mean value for the effective number of migrants (Nm) of 0.179 indicated low levels of gene flow between the different localities of R. pumilio.The negative, near zero Fis value of -0.01 indicated a balance between heterozygotes and homozygotes. Rogers (1972) genetic similarity ranged between 0.796 and 0.988, and Nei's (1978) unbiased genetic distance varied between 0.000 and 0.189 between the samples of R. pumilio. The phenogram based on Nei's (1978) unbiased genetic distance showed some degree of geographical subgrouping. The Mantel test indicated a significant relationship between the Fst values and the geographical distances between sample pairs, supporting an isolation by distance model for R. pumilio. Although the genetic evidence for geographical divergence does suggest the possible existence of subspecies, this remains to be substantiated

A 25-year review of fertilizer consumption and plant nutrient removal in the prairie provinces

Non-Peer ReviewedNutrient removal I replacement ratios were calculated in Manitoba, Saskatchewan, and Alberta from 1965 to 1989 by dividing total fertilizer (N, P, and K) sales by the total crop removal of plant nutrients. The nutrient removal I replacement ratios revealed that significant depletions of soil reserves of N, P, and K have taken place over the past 25 years. The average negative balance of N, P2O5, and K2O on the prairies is estimated at 640, 125, and 490 thousand tonnes. Even with the substantial increase in the use of fertilizers in the past five years compared to the 25 year average, the nutrient deficit continues to be unacceptably high for nitrogen (485,000 tonnes), only modest for phosphorus (86,000 tonnes), and as could be expected for potassium, has increased significantly to 570,000 tonnes. Overall, the calculations suggest that Manitoba is very close to nitrogen and phosphorus balance. Alberta has a relatively close balance, while Saskatchewan has not only experienced an unacceptably high N and P deficit for the past 25 years, but continues to do so at the present time

Electronic polarization in pentacene crystals and thin films

Electronic polarization is evaluated in pentacene crystals and in thin films on a metallic substrate using a self-consistent method for computing charge redistribution in non-overlapping molecules. The optical dielectric constant and its principal axes are reported for a neutral crystal. The polarization energies P+ and P- of a cation and anion at infinite separation are found for both molecules in the crystal's unit cell in the bulk, at the surface, and at the organic-metal interface of a film of N molecular layers. We find that a single pentacene layer with herring-bone packing provides a screening environment approaching the bulk. The polarization contribution to the transport gap P=(P+)+(P-), which is 2.01 eV in the bulk, decreases and increases by only ~ 10% at surfaces and interfaces, respectively. We also compute the polarization energy of charge-transfer (CT) states with fixed separation between anion and cation, and compare to electroabsorption data and to submolecular calculations. Electronic polarization of ~ 1 eV per charge has a major role for transport in organic molecular systems with limited overlap.Comment: 10 revtex pages, 6 PS figures embedde

The shock compression of microorganism-loaded broths and emulsions: Experiments and simulations

By carefully selecting flyer plate thickness and the geometry of a target capsule for bacterial broths and emulsions, we have successfully subjected the contents of the capsule to simultaneous shock and dynamic compression when subjected to a flyer-plate impact experiment. The capsules were designed to be recovered intact so that post experimental analysis could be done on the contents. ANSYS® AUTODYN hydrocode simulations were carried out to interrogate the deformation of the cover plate and the wave propagation in the fluid. Accordingly, we have shown that microorganisms such as Escherichia coli, Enterococcus faecalis and Zygosaccharomyces bailii are not affected by this type of loading regime. However, by introducing a cavity behind the broth we were able to observe limited kill in the yeast sample. Further, on using this latter technique with emulsions it was shown that greater emulsification of an oil-based emulsion occurred due to the cavitation that was introduced

Thermal Starch Properties in Corn Belt and Exotic Corn Inbred Lines and Their Crosses

More knowledge is needed about variability of starch functional traits in adapted and exotic germplasm and possible genetic effects of these traits before conducting rigorous inheritance studies and breeding programs for starch quality. We studied and compared the range of variability for starch functional traits in a set of Corn Belt inbred lines with a set of exotic inbred lines from Argentina, Uruguay, and South Africa. Reciprocal hybrids of some of the lines within each set were compared with their parents. Functional traits were examined by using differential scanning calorimetry on starch extracted from single kernels of genotypes. The set of Corn Belt lines had a wider range of values for most traits than did the set of exotic lines. For both sets of lines, the maximum value for peak height index was as high as that previously reported for the waxy endosperm mutant. Although the Corn Belt lines exhibited a wider range of values for range of retrogradation than the exotic lines, the exotic lines showed a wider range of values for percentage retrogradation. Hybrid values were not consistently higher, lower, midpoint, or similar with respect to the values of their parents. This was true regardless of germplasm type or functional trait. Reciprocal cross values showed trends suggesting reciprocal differences, although there was no trend suggesting greater effect of the female parent. These traits seem to be controlled by many modifying effects in addition to major effects. Results indicate that sufficient variability exists in Corn Belt germplasm to conduct breeding and inheritance studies effectively and that there should be potential for breeding for functional traits

A Mechanism-Based Explanation of the Institutionalization of Semantic Technologies in the Financial Industry

Part 3: Creating Value through ApplicationsInternational audienceThis paper explains how the financial industry is solving its data, risk management, and associated vocabulary problems using semantic technologies. The paper is the first to examine this phenomenon and to identify the social and institutional mechanisms being applied to socially construct a standard common vocabulary using ontology-based models. This standardized ontology-based common vocabulary will underpin the design of next generation of semantically-enabled information systems (IS) for the financial industry. The mechanisms that are helping institutionalize this common vocabulary are identified using a longitudinal case study, whose embedded units of analysis focus on central agents of change—the Enterprise Data Management Council and the Object Management Group. All this has important implications for society, as it is intended that semantically-enabled IS will, for example, provide stakeholders, such as regulators, with better transparency over systemic risks to national and international financial systems, thereby mitigating or avoiding future financial crises

General Relativity as an Attractor in Scalar-Tensor Stochastic Inflation

Quantum fluctuations of scalar fields during inflation could determine the very large-scale structure of the universe. In the case of general scalar-tensor gravity theories these fluctuations lead to the diffusion of fundamental constants like the Planck mass and the effective Brans--Dicke parameter, $\omega$. In the particular case of Brans--Dicke gravity, where $\omega$ is constant, this leads to runaway solutions with infinitely large values of the Planck mass. However, in a theory with variable $\omega$ we find stationary probability distributions with a finite value of the Planck mass peaked at exponentially large values of $\omega$ after inflation. We conclude that general relativity is an attractor during the quantum diffusion of the fields.Comment: LaTeX (with RevTex) 11 pages, 2 uuencoded figures appended, also available on WWW via http://star.maps.susx.ac.uk/index.htm

A new photon recoil experiment: towards a determination of the fine structure constant

We report on progress towards a measurement of the fine structure constant to an accuracy of $5\times 10^{-10}$ or better by measuring the ratio of the Planck constant to the mass of the cesium atom. Compared to similar experiments, ours is improved in three significant ways: (i) simultaneous conjugate interferometers, (ii) multi-photon Bragg diffraction between same internal states, and (iii) an about 1000 fold reduction of laser phase noise to -138 dBc/Hz. Combining that with a new method to simultaneously stabilize the phases of four frequencies, we achieve 0.2 mrad effective phase noise at the location of the atoms. In addition, we use active stabilization to suppress systematic effects due to beam misalignment.Comment: 12 pages, 9 figure

Long-lived oscillons from asymmetric bubbles

The possibility that extremely long-lived, time-dependent, and localized field configurations (``oscillons'') arise during the collapse of asymmetrical bubbles in 2+1 dimensional phi^4 models is investigated. It is found that oscillons can develop from a large spectrum of elliptically deformed bubbles. Moreover, we provide numerical evidence that such oscillons are: a) circularly symmetric; and b) linearly stable against small arbitrary radial and angular perturbations. The latter is based on a dynamical approach designed to investigate the stability of nonintegrable time-dependent configurations that is capable of probing slowly-growing instabilities not seen through the usual ``spectral'' method.Comment: RevTeX 4, 9 pages, 11 figures. Revised version with a new approach to stability. Accepted to Phys. Rev.

Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder

Patterns of daily human activity are controlled by an intrinsic circadian clock that promotes ∼24 hr rhythms in many behavioral and physiological processes. This system is altered in delayed sleep phase disorder (DSPD), a common form of insomnia in which sleep episodes are shifted to later times misaligned with the societal norm. Here, we report a hereditary form of DSPD associated with a dominant coding variation in the core circadian clock gene CRY1, which creates a transcriptional inhibitor with enhanced affinity for circadian activator proteins Clock and Bmal1. This gain-of-function CRY1 variant causes reduced expression of key transcriptional targets and lengthens the period of circadian molecular rhythms, providing a mechanistic link to DSPD symptoms. The allele has a frequency of up to 0.6%, and reverse phenotyping of unrelated families corroborates late and/or fragmented sleep patterns in carriers, suggesting that it affects sleep behavior in a sizeable portion of the human population. © 2017 Elsevier Inc