Genome cloning and genetic diversity of Apple chlorotic leaf spot virus

514-519Apple chlorotic leaf spot virus (ACLSV) with a wide distribution and variability is great threat to apple yield and quality. The systematic research on the occurrence, genetic structure and evolutionary mechanism is important for the prevention of ACLSV. In this study, 360 apple leaf samples were collected from Shanxi province and tested by RT-PCR, and the result showed that the incidence of ACLSV in Shanxi was ranged from 43.59% in Linfen to 68.18% in Wanrong. One new ACLSV isolate (shanxi14-MK368727) was collected from the positive samples, of which the genome (including the 5' and 3' ends) was 7507 bp and encoded 2536 amino acids. Compared with online database, the highest nd identity was between shanxi14 and KJ522693.1, and the lowest was shanxi14 and M58152.1. Phylogenetic analyzed based on genome showed that 25 isolated of ACLSV were divided two groups (Group I and II), which showed that was no significant correlation with geographic location. The selection pressures of POL, MP and CP were tested, the result proved the three genes were under negative selection pressure. The knowledge presented in this study will be useful in for the design of long-term, sustainable management strategies for controlling these viruses

2-Chloro-5-chloro­meth­yl-1,3-thia­zole

In the title compound, C4H3Cl2NS, the chloro­methyl C and 2-position Cl atoms lie close to the mean plane of the thia­zole ring [deviations = 0.0568 (2) and 0.0092 (1) Å, respectively]. No classical hydrogen bonds are found in the crystal structure

Correlated two-photon imaging with true thermal light

We report the first experimental demonstration of two-photon correlated imaging with true thermal light from a hollow cathode lamp. The coherence time of the source is much shorter than that of previous experiments using random scattered light from a laser. A two-pinhole mask was used as object, and the corresponding thin lens equation was well satisfied. Since thermal light sources are easier to obtain and measure than entangled light it is conceivable that they may be used in special imaging applications.Comment: 3 pages, 5 figures, accepted by Optics Letter

Numerical Study on the Dynamic Process of Single Plume Flow in Thermal Convection with Polymers

A direct numerical simulation of single plume flow in thermal convection with polymers was carried out in a domain with 1:3 as the width to height ratio. The heat transport ability is weakened by adding polymers within the here-investigated governing parameter range. However, it is promoted when the maximum polymer extension L is increased. The distribution of vertical velocity and temperature indicates that the plume in the polymer solution case is speeded up and widens bigger as compared to that in the Newtonian fluid case. Inside the plume, polymer chains tend to release energy at the position where the velocity is decelerated. The ratio of Nusselt numbers (Nu/NuNew) shows the power-law scaling relation with the governing parameter L2/Wi in polymer solution cases, which is only applicable for moderate Wi and small L. The present study can give direct insight into the observation about plumes in turbulent thermal convection experiments. It is therefore useful for the analysis of heat transport in thermal convection with polymers

N-(2,6-Dichloro­phen­yl)-5-methyl-1,2-oxazole-4-carboxamide monohydrate

In the title compound, C11H8Cl2N2O2·H2O, the dihedral angle between the benzene and isoxazole rings is 59.10 (7)°. In the crystal, the components are linked by N—H⋯O and O—H⋯O hydrogen bonds into a three-dimensional network. The crystal structure is further stabilized by π–π stacking inter­actions [centroid–centroid distance = 3.804 (2) Å]

Superresolution Reconstruction of Single Image for Latent features

In recent years, Deep Learning has shown good results in the Single Image Superresolution Reconstruction (SISR) task, thus becoming the most widely used methods in this field. The SISR task is a typical task to solve an uncertainty problem. Therefore, it is often challenging to meet the requirements of High-quality sampling, fast Sampling, and diversity of details and texture after Sampling simultaneously in a SISR task.It leads to model collapse, lack of details and texture features after Sampling, and too long Sampling time in High Resolution (HR) image reconstruction methods. This paper proposes a Diffusion Probability model for Latent features (LDDPM) to solve these problems. Firstly, a Conditional Encoder is designed to effectively encode Low-Resolution (LR) images, thereby reducing the solution space of reconstructed images to improve the performance of reconstructed images. Then, the Normalized Flow and Multi-modal adversarial training are used to model the denoising distribution with complex Multi-modal distribution so that the Generative Modeling ability of the model can be improved with a small number of Sampling steps. Experimental results on mainstream datasets demonstrate that our proposed model reconstructs more realistic HR images and obtains better PSNR and SSIM performance compared to existing SISR tasks, thus providing a new idea for SISR tasks

Cholesteryl ester transfer protein TaqIB polymorphism and its association with serum lipid levels and longevity in Chinese Bama Zhuang population

<p>Abstract</p> <p>Background</p> <p><it>Taq</it>IB polymorphism in the cholesteryl ester transfer protein (CETP) gene has been reported to be associated with serum high-density lipoprotein cholesterol (HDL-C) levels and longevity in several populations, but controversial results also arose probably due to racial/ethnic diversity. Bama is a remote and mountainous county located in the northwest of Guangxi, People's Republic of China, which has been well known for its longevity for centuries. The current study was to investigate the possible association of CETP <it>Taq</it>IB polymorphism with serum lipid levels and longevity in the Bama Zhuang population.</p> <p>Methods</p> <p>The CETP <it>Taq</it>IB genotypes were determined by polymerase chain reaction and restriction fragment length polymorphism in 523 long-lived inhabitants (long-lived group, LG; aged 90-107 years) and 498 healthy controls without longevity family history (non-long-lived group, non-LG; aged 40-69 years) residing in Bama County.</p> <p>Results</p> <p>The levels of total cholesterol (TC), high-density lipoprotein cholesterol (HDL-C), and low-density lipoprotein cholesterol (LDL-C) were higher but TG, HDL-C/LDL-C ratio and the prevalence of dyslipidemia were lower in LG than in non-LG (<it>P </it>< 0.001 for all). There were no differences in the allelic and genotypic frequencies between the two groups (<it>P </it>> 0.05). Serum HDL-C levels and HDL-C/LDL-C ratio in LG were different among the genotypes (<it>P </it>< 0.01 for each), the subjects with B2B2 and B1B2 genotyes had higher HDL-C levels and HDL-C/LDL-C ratio than the subjects with B1B1genotye, whereas the levels of TC and HDL-C in non-LG were different among/between the genotypes (<it>P </it>< 0.01 for each), the B2 allele carriers had lower TC and higher HDL-C levels than the B2 allele noncarriers. Serum TG and HDL-C levels and HDL-C/LDL-C ratio were correlated with genotypes in LG, whereas serum TC and HDL-C levels were associated with genotypes in non-LG (<it>P </it>< 0.05-0.001).</p> <p>Conclusions</p> <p>The association of CETP <it>Taq</it>IB polymorphism and serum lipid profiles is different between LG and non-LG in the Chinese Bama Zhuang population. CETP <it>Taq</it>IB polymorphism might be one of the longevity-related genetic factors in this population.</p

Prediction of the potentially suitable areas of Ligularia virgaurea and Ligularia sagitta on the Qinghai–Tibet Plateau based on future climate change using the MaxEnt model

Ligularia virgaurea and Ligularia sagitta are two species of poisonous plants with strong invasiveness in natural grasslands in China that have caused considerable harm to animal husbandry and the ecological environment. However, little is known about their suitable habitats and the key environmental factors affecting their distribution. Although some studies have reported the distributions of poisonous plants on the Qinghai–Tibet Plateau (QTP) and predicted their potential distributions at local scales in some regions under climate change, there have been few studies on the widespread distributions of L. virgaurea and L. sagitta. In this study, we recorded 276 and 118 occurrence points of L. virgaurea and L. sagitta on the QTP using GPS, and then used the MaxEnt model to predict the distribution of suitable habitats. Results showed that (1) under current climate conditions, L. virgaurea and L. sagitta are mainly distributed in southern Gansu, eastern Qinghai, northwestern Sichuan, eastern Tibet, and southwestern Yunnan, accounting for approximately 34.9% and 39.8% of the total area of the QTP, respectively; (2) the main environmental variables affecting the distribution of suitable habitats for L. virgaurea and L. sagitta are the Human Footprint Index (52.8%, 42.2%), elevation (11%, 4.4%), soil total nitrogen (18.9%, 4.2%), and precipitation seasonality (5.1%, 7.3%); and (3) in the future, in the 2050s and 2070s, the area of habitat of intermediate suitability for L. virgaurea will spread considerably in northwest Sichuan, while that of high suitability for L. sagitta will spread to eastern Tibet and western Sichuan