646 research outputs found
Incommensuration Effects and Dynamics in Vortex Chains
We examine the motion of one-dimensional (1D) vortex matter embedded in a 2D
vortex system with weak pinning using numerical simulations. We confirm the
conjecture of Matsuda et al. [Science 294, 2136 (2001)] that the onset of the
temperature induced motion of the chain is due to an incommensuration effect of
the chain with the periodic potential created by the bulk vortices. In
addition, under an applied driving force we find a two stage depinning
transition, where the initial depinning of the vortex chain occurs through
soliton like pulses. When an ac drive is added to the dc drive, we observe
phase locking of the moving vortex chain.Comment: 4 pages, 4 postscript figure
Dynamic Vortex Phases and Pinning in Superconductors with Twin Boundaries
We investigate the pinning and driven dynamics of vortices interacting with
twin boundaries using large scale molecular dynamics simulations on samples
with near one million pinning sites. For low applied driving forces, the vortex
lattice orients itself parallel to the twin boundary and we observe the
creation of a flux gradient and vortex free region near the edges of the twin
boundary. For increasing drive, we find evidence for several distinct dynamical
flow phases which we characterize by the density of defects in the vortex
lattice, the microscopic vortex flow patterns, and orientation of the vortex
lattice. We show that these different dynamical phases can be directly related
to microscopically measurable voltage - current V(I) curves and voltage noise.
By conducting a series of simulations for various twin boundary parameters we
derive several vortex dynamic phase diagrams.Comment: 5 figures, to appear in Phys. Rev.
A dynamo model of Jupiter's magnetic field
Jupiter's dynamo is modelled using the anelastic convection-driven dynamo equations. The reference state model is taken from French et al. [2012]. Astrophys. J. Suppl. 202, 5, (11pp), which used density functional theory to compute the equation of state and the electrical conductivity in Jupiter's interior. Jupiter's magnetic field is approximately dipolar, but self-consistent dipolar dynamo models are rather rare when the large variation in density and the effective internal heating are taken into account. Jupiter-like dipolar magnetic fields were found here at small Prandtl number, Pr = 0.1. Strong differential rotation in the dynamo region tends to destroy a dominant dipolar component, but when the convection is sufficiently supercritical it generates a strong magnetic field, and the differential rotation in the electrically conducting region is suppressed by the Lorentz force. This allows a magnetic field to develop which is dominated by a steady dipolar component. This suggests that the strong zonal winds seen at Jupiter's surface cannot penetrate significantly into the dynamo region, which starts approximately 7000. km below the surface
Modeling DNA Structure, Elasticity and Deformations at the Base-pair Level
We present a generic model for DNA at the base-pair level. We use a variant
of the Gay-Berne potential to represent the stacking energy between neighboring
base-pairs. The sugar-phosphate backbones are taken into account by semi-rigid
harmonic springs with a non-zero spring length. The competition of these two
interactions and the introduction of a simple geometrical constraint leads to a
stacked right-handed B-DNA-like conformation. The mapping of the presented
model to the Marko-Siggia and the Stack-of-Plates model enables us to optimize
the free model parameters so as to reproduce the experimentally known
observables such as persistence lengths, mean and mean squared base-pair step
parameters. For the optimized model parameters we measured the critical force
where the transition from B- to S-DNA occurs to be approximately . We
observe an overstretched S-DNA conformation with highly inclined bases that
partially preserves the stacking of successive base-pairs.Comment: 15 pages, 25 figures. submitted to PR
Personalised service? Changing the role of the government librarian
Investigates the feasibility of personalised information service in a government department. A qualitative methodology explored stakeholder opinions on the remit, marketing, resourcing and measurement of the service. A questionnaire and interviews gathered experiences of personalised provision across the government sector. Potential users were similarly surveyed to discuss how the service could meet their needs. Data were analysed using coding techniques to identify emerging theory. Lessons learned from government librarians centred on clarifying requirements, balancing workloads and selective marketing. The user survey showed low usage and awareness of existing specialist services, but high levels of need and interest in services repackaged as a tailored offering. Fieldwork confirmed findings from the literature on the scope for adding value through information management advice, information skills training and substantive research assistance and the need to understand business processes and develop effective partnerships. Concluding recommendations focus on service definition, strategic marketing, resource utilisation and performance measurement
FGF receptor genes and breast cancer susceptibility: results from the Breast Cancer Association Consortium
Background:Breast cancer is one of the most common malignancies in women. Genome-wide association studies have identified FGFR2 as a breast cancer susceptibility gene. Common variation in other fibroblast growth factor (FGF) receptors might also modify risk. We tested this hypothesis by studying genotyped single-nucleotide polymorphisms (SNPs) and imputed SNPs in FGFR1, FGFR3, FGFR4 and FGFRL1 in the Breast Cancer Association Consortium.
Methods:Data were combined from 49 studies, including 53 835 cases and 50 156 controls, of which 89 050 (46 450 cases and 42 600 controls) were of European ancestry, 12 893 (6269 cases and 6624 controls) of Asian and 2048 (1116 cases and 932 controls) of African ancestry. Associations with risk of breast cancer, overall and by disease sub-type, were assessed using unconditional logistic regression.
Results:Little evidence of association with breast cancer risk was observed for SNPs in the FGF receptor genes. The strongest evidence in European women was for rs743682 in FGFR3; the estimated per-allele odds ratio was 1.05 (95 confidence interval=1.02-1.09, P=0.0020), which is substantially lower than that observed for SNPs in FGFR2.
Conclusion:Our results suggest that common variants in the other FGF receptors are not associated with risk of breast cancer to the degree observed for FGFR2. © 2014 Cancer Research UK
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