The Impact of Outcrossing on Yields of ‘Hass’ Avocado

‘Hass’ avocado (Persea americana Mill.) is characterized by excessive flower and fruit abscission, resulting in extremely low fruit set. Low outcrossing rates might be a factor contributing to low yields. It is hypothesized that self-fertilized flowers and resulting fruit abscise at a much higher rate than fruit that are the product of outcrossing. However, significant relationships between outcrossing rates and yields have only been established in a few avocado studies. The objective of this research was to investigate the importance of outcrossing to yield in a commercial ‘Hass’ orchard containing ‘Bacon’, an effective pollinizer of ‘Hass’. Microsatellite markers were used to determine the rate of outcrossing of fruit persisting to harvest on ‘Hass’ trees. Experiments were conducted during sequential on-and off-crop years. During both years, outcrossing rates were not related to yield or alternate bearing. These results indicate that outcrossing was not the primary factor affecting flower and fruit persistence and ultimately yield in this orchard for the two sequential years of this research

Single-cell analysis of human MAIT cell transcriptional, functional and clonal diversity

Mucosal-associated invariant T (MAIT) cells are innate-like T cells that recognize microbial metabolites through a semi-invariant T cell receptor (TCR). Major questions remain regarding the extent of human MAIT cell functional and clonal diversity. To address these, we analyzed the single-cell transcriptome and TCR repertoire of blood and liver MAIT cells and developed functional RNA-sequencing, a method to integrate function and TCR clonotype at single-cell resolution. MAIT cell clonal diversity was comparable to conventional memory T cells, with private TCR repertoires shared across matched tissues. Baseline functional diversity was low and largely related to tissue site. MAIT cells showed stimulus-specific transcriptional responses in vitro, with cells positioned along gradients of activation. Clonal identity influenced resting and activated transcriptional profiles but intriguingly was not associated with the capacity to produce IL-17. Overall, MAIT cells show phenotypic and functional diversity according to tissue localization, stimulation environment and clonotype

Assessment of reproducibility of matrix-assisted laser desorption ionization - Time of flight mass spectrometry for bacterial and yeast identification

Matrix-assisted laser desorption ionization–time of flight (MALDI-TOF) mass spectrometry (MS) has revolutionized the identification of clinical bacterial and yeast isolates. However, data describing the reproducibility of MALDI-TOF MS for microbial identification are scarce. In this study, we show that MALDI-TOF MS-based microbial identification is highly reproducible and can tolerate numerous variables, including differences in testing environments, instruments, operators, reagent lots, and sample positioning patterns. Finally, we reveal that samples of bacterial and yeast isolates prepared for MALDI-TOF MS identification can be repeatedly analyzed without compromising organism identification