2,762 research outputs found

    Review of The Undiscovered C. S. Lewis: Essays in Memory of Christopher W. Mitchell

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    Review of Bruce R. Johnson, ed., The Undiscovered C. S. Lewis: Essays in Memory of Christopher W. Mitchell (Hamden, CT: Winged Lion Press, 2021). 389 pages. $24.99. ISBN 978193568813

    Mechanisms by which circadian rhythm disruption may lead to cancer

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    Humans have evolved in a rhythmic environment and display daily (circadian) rhythms in physiology, metabolism and behaviour that are in synchrony with the solar day. Modern lifestyles have compromised the exposure to bright light during the day and dark nights, resulting in the desynchronisation of endogenously generated circadian rhythms from the external environment and loss of coordination between rhythms within the body. This has detrimental effects on physical and mental health, due to the misregulation and uncoupling of important cellular and physiological processes. Long-term shift workers who are exposed to bright light at night experience the greatest disruption of their circadian rhythms. Studies have shown an association between exposure to light at night, circadian rhythm disruption and an increased risk of cancer. Previous reviews have explored the relevance of light and melatonin in cancer, but here we explore the correlation of circadian rhythm disruption and cancer in terms of molecular mechanisms affecting circadian gene expression and melatonin secretion

    Using machine learning techniques to automate sky survey catalog generation

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    We describe the application of machine classification techniques to the development of an automated tool for the reduction of a large scientific data set. The 2nd Palomar Observatory Sky Survey provides comprehensive photographic coverage of the northern celestial hemisphere. The photographic plates are being digitized into images containing on the order of 10(exp 7) galaxies and 10(exp 8) stars. Since the size of this data set precludes manual analysis and classification of objects, our approach is to develop a software system which integrates independently developed techniques for image processing and data classification. Image processing routines are applied to identify and measure features of sky objects. Selected features are used to determine the classification of each object. GID3* and O-BTree, two inductive learning techniques, are used to automatically learn classification decision trees from examples. We describe the techniques used, the details of our specific application, and the initial encouraging results which indicate that our approach is well-suited to the problem. The benefits of the approach are increased data reduction throughput, consistency of classification, and the automated derivation of classification rules that will form an objective, examinable basis for classifying sky objects. Furthermore, astronomers will be freed from the tedium of an intensely visual task to pursue more challenging analysis and interpretation problems given automatically cataloged data

    Some Properties of the Exchange Operator with respect to Structured Matrices defined by Indefinite Scalar Product Spaces

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    The properties of the exchange operator on some types of matrices are explored in this paper. In particular, the properties of exc(A,p,q), where A is a given structured matrix of size (p+q)Ã(p+q) and exc : M ÃNÃN â M is the exchange operator are studied. This paper is a generalization of one of the results in [N.J. Higham. J-orthogonal matrices: Properties and generation. SIAM Review, 45:504â519, 2003.]

    Data-Mining a Large Digital Sky Survey: From the Challenges to the Scientific Results

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    The analysis and an efficient scientific exploration of the Digital Palomar Observatory Sky Survey (DPOSS) represents a major technical challenge. The input data set consists of 3 Terabytes of pixel information, and contains a few billion sources. We describe some of the specific scientific problems posed by the data, including searches for distant quasars and clusters of galaxies, and the data-mining techniques we are exploring in addressing them. Machine-assisted discovery methods may become essential for the analysis of such multi-Terabyte data sets. New and future approaches involve unsupervised classification and clustering analysis in the Giga-object data space, including various Bayesian techniques. In addition to the searches for known types of objects in this data base, these techniques may also offer the possibility of discovering previously unknown, rare types of astronomical objects.Comment: Invited paper, to appear in Applications of Digital Image Processing XX, ed. A. Tescher, Proc. S.P.I.E. vol. 3164, in press; 10 pages, a self-contained TeX file, and 3 separate postscript figure

    Suppression of quantum oscillations and the dependence on site energies in electronic excitation transfer in the Fenna-Matthews-Olson trimer

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    Energy transfer in the photosynthetic complex of the Green Sulfur Bacteria known as the Fenna-Matthews-Olson (FMO) complex is studied theoretically taking all three subunits (monomers) of the FMO trimer and the recently found eighth bacteriochlorophyll (BChl) molecule into account. We find that in all considered cases there is very little transfer between the monomers. Since it is believed that the eighth BChl is located near the main light harvesting antenna we look at the differences in transfer between the situation when BChl 8 is initially excited and the usually considered case when BChl 1 or 6 is initially excited. We find strong differences in the transfer dynamics, both qualitatively and quantitatively. When the excited state dynamics is initialized at site eight of the FMO complex, we see a slow exponential-like decay of the excitation. This is in contrast to the oscillations and a relatively fast transfer that occurs when only seven sites or initialization at sites 1 and 6 is considered. Additionally we show that differences in the values of the electronic transition energies found in the literature lead to a large difference in the transfer dynamics

    Protocol: precision engineering of plant gene loci by homologous recombination cloning in Escherichia coli.

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    Plant genome sequence data now provide opportunities to conduct molecular genetic studies at the level of the whole gene locus and above. Such studies will be greatly facilitated by adopting and developing further the new generation of genetic engineering tools, based on homologous recombination cloning in Escherichia coli, which are free from the constraints imposed by the availability of suitably positioned restriction sites. Here we describe the basis for homologous recombination cloning in E. coli, the available tools and resources, together with a protocol for long range cloning and manipulation of an Arabidopsis thaliana gene locus, to create constructs co-ordinately driven by locus-specific regulatory elements.RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are
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