Contributions in the field of palaeopalynology at the Bernard Price Institute, past, present and future

Main articleA brief chronological summary of the palynological research carried out by students and past members of the staff at the Bernard Price Institute for Palaeontological Research is presented. The contribution that each of these studies has made to the understanding of stratigraphic relationships in the southern African region is highlighted. A correlation chart of palynological biozones documented from South African localities is presented (Table 1).Non

Evaluation of enzyme immunoassays in the diagnosis of camel (Camelus dromedarius) trypanosomiasis:a preliminary investigation

Three enzyme immunoassays were used for the serodiagnosis of Trypanosoma evansi in camels in the Sudan in order to evaluate their ability to discriminate between infected and non-infected animals. Two assays were used for the detection of trypanosomal antibodies, one using specific anti-camel IgG conjugate and another using a non-specific Protein A conjugate. The third assay detected the presence of trypanosomal antigens using anti-T. evansi antibodies in a double antibody sandwich assay. Inspection of the frequency distribution of assay results suggested that the ELISA for circulating trypanosomal antibodies using specific antisera and the ELISA for circulating antigens can distinguish between non-infected camels and infected camels exhibiting patent infections or not. The ELISA using Protein A conjugate to bind non-specifically to camel immunoglobulin did not appear to discriminate between infected and non-infected animals

Using an ontology for interoperability and browsing of museum, library and archive information

Ontologies play an important part in the development of the future ‘semantic web’; the CIDOC conceptual reference model (CRM) is an ontology aimed at the cultural heritage domain. This paper describes a Concept Browser, developed for the EU/IST-funded SCULPTEUR project (semantic and content-based multimedia exploitation for European benefit environment (programme IST-2001-no. 35372); May 2002 to May 2005), which is able to access different museum information systems through a common ontology, the CRM. The development of this Concept Browser has required mappings from the legacy museum database systems to the CRM. The crucial process of creating the mappings is described, using the C2RMF catalogue (EROS) and library databases as a case study

Precise calculation of transition frequencies of hydrogen and deuterium based on a least-squares analysis

We combine a limited number of accurately measured transition frequencies in hydrogen and deuterium, recent quantum electrodynamics (QED) calculations, and, as an essential additional ingredient, a generalized least-squares analysis, to obtain precise and optimal predictions for hydrogen and deuterium transition frequencies. Some of the predicted transition frequencies have relative uncertainties more than an order of magnitude smaller than that of the g-factor of the electron, which was previously the most accurate prediction of QED.Comment: 4 pages, RevTe

Size-Selective Personal Air Sampling: A New Approach Using Porous Foams

Simultaneous sampling of three dust fractions (inhalable, thoracic, respirable) has been achieved using porous polyurethane foams, which serve both as selecting and sampling media. The particle penetration was measured in laboratory tests. Foam geometries were predicted using a semi-empirical model. Prototype samplers were constructed based on the IOM and GSP inhalable personal samplers. Weighing and chemical analysis procedures were checked for the foam

Pattern Synonyms

Pattern matching has proven to be a convenient, expressive way of inspecting data. Yet this language feature, in its traditional form, is limited: patterns must be data constructors of concrete data types. No computation or abstraction is allowed. The data type in question must be concrete, with no ability to enforce any invariants. Any change in this data type requires all clients to update their code. This paper introduces pattern synonyms, which allow programmers to abstract over patterns, painting over all the shortcomings listed above. Pattern synonyms are assigned types, enabling a compiler to check the validity of a synonym independent of its definition. These types are intricate; detailing how to assign a type to a pattern synonym is a key contribution of this work. We have implemented pattern synonyms in the Glasgow Haskell Compiler, where they have enjoyed immediate popularity, but we believe this feature could easily be exported to other languages that support pattern matching

The impact of loss to follow-up in the Dutch organised HPV-based cervical cancer screening programme

Loss to follow-up (LTFU) within cervical screening programmes can result in missed clinically relevant lesions, potentially reducing programme effectiveness. To examine the health impact of losing women during the screening process, we determined the proportion of women LTFU per step of the Dutch hrHPV-based screening programme. We then determined the probability of being LTFU by age, screening history and sampling method (self- or clinician-sampled) using logistic regression analysis. Finally, we estimated the number of missed CIN2+/3+ lesions per LTFU moment by using the CIN-risk in women compliant with follow-up. Data from the Dutch nationwide pathology databank (Palga) was used. Women eligible for screening in 2017 and 2018 were included (N = 840,428). For clinician collected (CC) samples, the highest proportion LTFU was found following ‘referral advice for colposcopy’ (5.5% after indirect referral; 3.8% after direct referral). For self-sampling, the highest proportions LTFU were found following the advice for repeat cytology (13.6%) and after referral advice for colposcopy (8.2% after indirect referral; 4.3% after direct referral). Self-sampling users and women with no screening history had a higher LTFU-risk (OR: 3.87, CI: 3.55–4.23; OR: 1.39, CI: 1.20–1.61) compared to women that used CC sampling and women that have been screened before, respectively. Of all women LTFU in 2017/18, the total number of potentially missed CIN2+ was 844 (21% of women LTFU). Most lesions were missed after ‘direct referral for colposcopy’ (N = 462, 11.5% of women LTFU). So, this indicates a gap between the screening programme and clinical care which requires further attention, by improving monitoring of patients after referral.</p

The impact of loss to follow-up in the Dutch organised HPV-based cervical cancer screening programme

Loss to follow-up (LTFU) within cervical screening programmes can result in missed clinically relevant lesions, potentially reducing programme effectiveness. To examine the health impact of losing women during the screening process, we determined the proportion of women LTFU per step of the Dutch hrHPV-based screening programme. We then determined the probability of being LTFU by age, screening history and sampling method (self- or clinician-sampled) using logistic regression analysis. Finally, we estimated the number of missed CIN2+/3+ lesions per LTFU moment by using the CIN-risk in women compliant with follow-up. Data from the Dutch nationwide pathology databank (Palga) was used. Women eligible for screening in 2017 and 2018 were included (N = 840,428). For clinician collected (CC) samples, the highest proportion LTFU was found following ‘referral advice for colposcopy’ (5.5% after indirect referral; 3.8% after direct referral). For self-sampling, the highest proportions LTFU were found following the advice for repeat cytology (13.6%) and after referral advice for colposcopy (8.2% after indirect referral; 4.3% after direct referral). Self-sampling users and women with no screening history had a higher LTFU-risk (OR: 3.87, CI: 3.55–4.23; OR: 1.39, CI: 1.20–1.61) compared to women that used CC sampling and women that have been screened before, respectively. Of all women LTFU in 2017/18, the total number of potentially missed CIN2+ was 844 (21% of women LTFU). Most lesions were missed after ‘direct referral for colposcopy’ (N = 462, 11.5% of women LTFU). So, this indicates a gap between the screening programme and clinical care which requires further attention, by improving monitoring of patients after referral.</p

Control theory for principled heap sizing

We propose a new, principled approach to adaptive heap sizing based on control theory. We review current state-of-the-art heap sizing mechanisms, as deployed in Jikes RVM and HotSpot. We then formulate heap sizing as a control problem, apply and tune a standard controller algorithm, and evaluate its performance on a set of well-known benchmarks. We find our controller adapts the heap size more responsively than existing mechanisms. This responsiveness allows tighter virtual machine memory footprints while preserving target application throughput, which is ideal for both embedded and utility computing domains. In short, we argue that formal, systematic approaches to memory management should be replacing ad-hoc heuristics as the discipline matures. Control-theoretic heap sizing is one such systematic approach