Lava flow field emplacement studies of Mauna Ulu (Kilauea Volcano, Hawai'i, USA) and Venus, using field and remote sensing analyses

This work examines lava emplacement processes by characterizing surface units using field and remote sensing analyses in order to understand the development of lava flow fields. Specific study areas are the 1969-1974 Mauna Ulu compound flow field, (Kilauea Volcano, Hawai'i, USA), and five lava flow fields on Venus: Turgmam Fluctus, Zipaltonal Fluctus, the Tuli Mons/Uilata Fluctus flow complex, the Var Mons flow field, and Mylitta Fluctus.Lava surface units have been examined in the field and with visible-, thermal-, and radar-wavelength remote sensing datasets for Mauna Ulu, and with radar data for the Venusian study areas. For the Mauna Ulu flow field, visible characteristics are related to color, glass abundance, and dm- to m-scale surface irregularities, which reflect the lava flow regime, cooling, and modification due to processes such as coalescence and inflation. Thermal characteristics are primarily affected by the abundance of glass and small-scale roughness elements (such as vesicles), and reflect the history of cooling, vesiculation and degassing, and crystallization of the lava. Radar characteristics are primarily affected by unit topography and fracturing, which are related to flow inflation, remobilization, and collapse, and reflect the local supply of lava during and after unit emplacement. Mauna Ulu surface units are correlated with pre-eruption topography, lack a simple relationship to the main feeder lava tubes, and are distributed with respect to their position within compound flow lobes and with distance from the vent.The Venusian lava flow fields appear to have developed through emplacement of numerous, thin, simple and compound flows, presumably over extended periods of time, and show a wider range of radar roughness than is observed at Mauna Ulu. A potential correlation is suggested between flow rheology and surface roughness. Distributary flow morphologies may result from tube-fed flows, and flow inflation is consistent with observed surface characteristics. Furthermore, the significance of inflation at Mauna Ulu and comparison of radar characteristics indicates that inflation may, in fact, be more prevalent on Venus than at Mauna Ulu. Although the Venusian flow fields display morphologies similar to those observed within terrestrial flow fields, the Venusian flow units are significantly larger

Immune-mediated loss of transgene expression from virally transduced brain cells is irreversible, mediated by IFNγ, perforin, and TNFα, and due to the elimination of transduced cells

The adaptive immune response to viral vectors reduces vector-mediated transgene expression from the brain. It is unknown, however, whether this loss is caused by functional downregulation of transgene expression or death of transduced cells. Herein, we demonstrate that during the elimination of transgene expression, the brain becomes infiltrated with CD4 and CD8 T cells and that these T cells are necessary for transgene elimination. Further, the loss of transgene-expressing brain cells fails to occur in the absence of IFNγ, perforin, and TNFα receptor. Two methods to induce severe immune suppression in immunized animals also fail to restitute transgene expression, demonstrating the irreversibility of this process. The need for cytotoxic molecules and the irreversibility of the reduction in transgene expression suggested to us that elimination of transduced cells is responsible for the loss of transgene expression. A new experimental paradigm that discriminates between downregulation of transgene expression and the elimination of transduced cells demonstrates that transduced cells are lost from the brain upon the induction of a specific antiviral immune response. We conclude that the anti-adenoviral immune response reduces transgene expression in the brain through loss of transduced cellsFil: Zirger, Jeffrey M.. Cedars Sinai Medical Center; Estados Unidos. University of California at Los Angeles. School of Medicine; Estados UnidosFil: Puntel, Mariana. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados Unidos. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Bergeron, Josee. Cedars Sinai Medical Center; Estados Unidos. University of California at Los Angeles. School of Medicine; Estados UnidosFil: Wibowo, Mia. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados UnidosFil: Moridzadeh, Rameen. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados UnidosFil: Bondale, Niyati. Cedars Sinai Medical Center; Estados Unidos. University of California at Los Angeles. School of Medicine; Estados UnidosFil: Barcia, Carlos. Cedars Sinai Medical Center; Estados Unidos. University of California at Los Angeles. School of Medicine; Estados UnidosFil: Kroeger, Kurt M.. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados UnidosFil: Liu, Chunyan. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados UnidosFil: Castro, Maria Graciela. University of California at Los Angeles. School of Medicine; Estados Unidos. Cedars Sinai Medical Center; Estados Unidos. University of Michigan; Estados UnidosFil: Lowenstein, Pedro R.. Cedars Sinai Medical Center; Estados Unidos. University of California at Los Angeles. School of Medicine; Estados Unidos. University of Michigan; Estados Unido

RBM47 regulates intestinal injury and tumorigenesis by modifying proliferation, oxidative response, and inflammatory pathways

RNA-binding protein 47 (RBM47) is required for embryonic endoderm development, but a role in adult intestine is unknown. We studied intestine-specific Rbm47-knockout mice (Rbm47-IKO) following intestinal injury and made crosses into ApcMin/+ mice to examine alterations in intestinal proliferation, response to injury, and tumorigenesis. We also interrogated human colorectal polyps and colon carcinoma tissue. Rbm47-IKO mice exhibited increased proliferation and abnormal villus morphology and cellularity, with corresponding changes in Rbm47-IKO organoids. Rbm47-IKO mice adapted to radiation injury and were protected against chemical-induced colitis, with Rbm47-IKO intestine showing upregulation of antioxidant and Wnt signaling pathways as well as stem cell and developmental genes. Furthermore, Rbm47-IKO mice were protected against colitis-associated cancer. By contrast, aged Rbm47-IKO mice developed spontaneous polyposis, and Rbm47-IKO ApcMin/+ mice manifested an increased intestinal polyp burden. RBM47 mRNA was decreased in human colorectal cancer versus paired normal tissue, along with alternative splicing of tight junction protein 1 mRNA. Public databases revealed stage-specific reduction in RBM47 expression in colorectal cancer associated independently with decreased overall survival. These findings implicate RBM47 as a cell-intrinsic modifier of intestinal growth, inflammatory, and tumorigenic pathways

Genome-wide identification and phenotypic characterization of seizure-associated copy number variations in 741,075 individuals

Copy number variants (CNV) are established risk factors for neurodevelopmental disorders with seizures or epilepsy. With the hypothesis that seizure disorders share genetic risk factors, we pooled CNV data from 10,590 individuals with seizure disorders, 16,109 individuals with clinically validated epilepsy, and 492,324 population controls and identified 25 genome-wide significant loci, 22 of which are novel for seizure disorders, such as deletions at 1p36.33, 1q44, 2p21-p16.3, 3q29, 8p23.3-p23.2, 9p24.3, 10q26.3, 15q11.2, 15q12-q13.1, 16p12.2, 17q21.31, duplications at 2q13, 9q34.3, 16p13.3, 17q12, 19p13.3, 20q13.33, and reciprocal CNVs at 16p11.2, and 22q11.21. Using genetic data from additional 248,751 individuals with 23 neuropsychiatric phenotypes, we explored the pleiotropy of these 25 loci. Finally, in a subset of individuals with epilepsy and detailed clinical data available, we performed phenome-wide association analyses between individual CNVs and clinical annotations categorized through the Human Phenotype Ontology (HPO). For six CNVs, we identified 19 significant associations with specific HPO terms and generated, for all CNVs, phenotype signatures across 17 clinical categories relevant for epileptologists. This is the most comprehensive investigation of CNVs in epilepsy and related seizure disorders, with potential implications for clinical practice

Assessing Groundwater Accessibility in the Kharga Basin, Egypt: A Remote Sensing Approach

We used multi-map analysis of remote sensing and ancillary data to identify potentially accessible sites for groundwater resources in the Kharga Basin in the Western Desert of Egypt. This basin is dominated by Cretaceous sandstone formations and extends within the Nubian Sandstone Aquifer. It is dissected by N-S and E-W trending faults, possibly acting as conduits for upward migration of groundwater. Analysis of paleo-drainage using Digital Elevation Model (DEM) generated from the Shuttle Radar Topography Mission (SRTM) data shows that the Kharga was a closed basin that might have been the site of a paleo-lake. Lake water recharged the Nubian Sandstone Aquifer during the wetter Holocene time. We generated the following layers for the multi-map analysis: (1) Fracture density map from the interpretation of Landsat Operational Land Imager (OLI), SRTM DEM, and RADARSAT data. (2) Thermal Inertia (TI) map (for moisture content imaging) from the Moderate Resolution Imaging Spectroradiometer (MODIS) data. (3) Hydraulic conductivity map from mapping lithological units using the Landsat OLI and previously published data. (4) Aquifer thickness map from previously published data. We quantitatively ranked the Kharga Basin by considering that regions of high fracture density, high TI, thicker aquifer, and high hydraulic conductivity have higher potential for groundwater accessibility. Our analysis shows that part of the southern Kharga Basin is suitable for groundwater extraction. This region is where N-S and E-W trending faults intersect, has relatively high TI and it is underlain by thick aquifer. However, the suitability of this region for groundwater use will be reduced significantly when considering the changes in land suitability and economic depth to groundwater extraction in the next 50 years