Acanthodians from the Silurian–Devonian boundary beds of Novaya Zemlya Archipelago, Russia

© 2018, © 2018 Geologiska Föreningen. An acanthodian assemblage is reported for the first time from the Silurian–Devonian boundary beds of Novaya Zemlya Archipelago, Russia. The acanthodian scales and rare other vertebrate microremains were in a sample collected from the Reliktovoe Formation of the western coast of Inostantzev Bay, North Island. The assemblage includes Gomphonchus mediocostatus, Gomphonchoporus hoppei taxa previously described from the Pridoli–Lochkovian of Laurussia, and Taimyrolepis composita occurred in the Lochkovian of Siberia. Gomphonchus mediocostatus and Gomphonchoporus hoppei are widely distributed in the Baltica palaeogeographic province, and Taimyrolepis is known from the Siberia province, indicating connection between those provinces

Over half of breakpoints in gene pairs involved in cancer-specific recurrent translocations are mapped to human chromosomal fragile sites.

Gene rearrangements such as chromosomal translocations have been shown to contribute to cancer development. Human chromosomal fragile sites are regions of the genome especially prone to breakage, and have been implicated in various chromosome abnormalities found in cancer. However, there has been no comprehensive and quantitative examination of the location of fragile sites in relation to all chromosomal aberrations

Culture-adapted Plasmodium falciparum isolates from UK travellers: in vitro drug sensitivity, clonality and drug resistance markers.

BACKGROUND: The screening of lead compounds against in vitro parasite cultures is an essential step in the development of novel anti-malarial drugs, but currently relies on laboratory parasite lines established in vitro during the last century. This study sought to establish in continuous culture a series of recent Plasmodium falciparum isolates to represent the current parasite populations in Africa, all of which are now exposed to artemisinin combination therapy. METHODS: Pre-treatment P. falciparum isolates were obtained in EDTA, and placed into continuous culture after sampling of DNA. One post-treatment blood sample was also collected for each donor to monitor parasite clonality during clearance in vivo. IC₅₀ estimates were obtained for 11 anti-malarial compounds for each established parasite line, clonal multiplicity measured in vivo and in vitro, and polymorphic sites implicated in parasite sensitivity to drugs were investigated at the pfmdr1, pfcrt, pfdhfr, pfdhps and pfap2mu loci before and after treatment, and in the cultured lines. RESULTS: Plasmodium falciparum isolates from seven malaria patients with recent travel to three West African and two East African countries were successfully established in long-term culture. One of these, HL1211, was from a patient with recrudescent parasitaemia 14 days after a full course of artemether-lumefantrine. All established culture lines were shown to be polyclonal, reflecting the in vivo isolates from which they were derived, and at least two lines reliably produce gametocytes in vitro. Two lines displayed high chloroquine IC₅₀ estimates, and carried the CVIET haplotype at codons 72-76, whereas the remaining five lines carried the CVMNK haplotype and were sensitive in vitro. All were sensitive to the endoperoxides dihydroartemisinin and OZ277, but IC₅₀ estimates for lumefantrine varied, with the least sensitive parasites carrying pfmdr1 alleles encoding Asn at codon 86. CONCLUSIONS: This study describes the establishment in continuous culture, in vitro drug sensitivity testing and molecular characterization of a series of multiclonal P. falciparum isolates taken directly from UK malaria patients following recent travel to various malaria-endemic countries in Africa. These "HL" isolates are available as an open resource for studies of drug response, antigenic diversity and other aspects of parasite biology

The Mu subunit of Plasmodium falciparum clathrin-associated adaptor protein 2 modulates in vitro parasite response to artemisinin and quinine.

The emergence of drug-resistant parasites is a serious threat faced by malaria control programs. Understanding the genetic basis of resistance is critical to the success of treatment and intervention strategies. A novel locus associated with antimalarial resistance, ap2-mu (encoding the mu chain of the adaptor protein 2 [AP2] complex), was recently identified in studies on the rodent malaria parasite Plasmodium chabaudi (pcap2-mu). Furthermore, analysis in Kenyan malaria patients of polymorphisms in the Plasmodium falciparum ap2-mu homologue, pfap2-mu, found evidence that differences in the amino acid encoded by codon 160 are associated with enhanced parasite survival in vivo following combination treatments which included artemisinin derivatives. Here, we characterize the role of pfap2-mu in mediating the in vitro antimalarial drug response of P. falciparum by generating transgenic parasites constitutively expressing codon 160 encoding either the wild-type Ser (Ser160) or the Asn mutant (160Asn) form of pfap2-mu. Transgenic parasites carrying the pfap2-mu 160Asn allele were significantly less sensitive to dihydroartemisinin using a standard 48-h in vitro test, providing direct evidence of an altered parasite response to artemisinin. Our data also provide evidence that pfap2-mu variants can modulate parasite sensitivity to quinine. No evidence was found that pfap2-mu variants contribute to the slow-clearance phenotype exhibited by P. falciparum in Cambodian patients treated with artesunate monotherapy. These findings provide compelling evidence that pfap2-mu can modulate P. falciparum responses to multiple drugs. We propose that this gene should be evaluated further as a potential molecular marker of antimalarial resistance

Neutrino - nucleon reaction rates in the supernova core in the relativistic random phase approximation

In view of the application to supernova simulations, we calculate neutrino reaction rates with nucleons via the neutral and charged currents in the supernova core in the relativistic random phase approximation (RPA) and study their effects on the opacity of the supernova core. The formulation is based on the Lagrangian employed in the calculation of nuclear equation of state (EOS) in the relativistic mean field theory (RMF). The nonlinear meson terms are treated appropriately so that the consistency of the density correlation derived in RPA with the thermodynamic derivative obtained from EOS by RMF is satisfied in the static and long wave length limit. We employ pion and rho meson exchange interactions together with the phenomenological Landau-Migdal parameters for the isospin-dependent nuclear interactions. We find that both the charged and neutral current reaction rates are suppressed from the standard Bruenn's approximate formula considerably in the high density regime. In the low density regime, on the other hand, the vector current contribution to the neutrino-nucleon scattering rate is enhanced in the vicinity of the boundary of the liquid-gas phase transition, while the other contributions are moderately suppressed there also. In the high temperature regime or in the regime where electrons have a large chemical potential, the latter of which is important only for the electron capture process and its inverse process, the recoil of nucleons cannot be neglected and further reduces the reaction rates with respect to the standard approximate formula which discards any energy transfer in the processes. These issues could have a great impact on the neutrino heating mechanism of collapse-driven supernovae.Comment: 16pages, 19figures, submitted to PR

Atom Interferometry for Dark Contents of the Vacuum Searches

A cold atom interferometer is being developed using 85Rb atoms towards a search for the dark contents of the vacuum, and as a test stand for inertial sensing applications. Here we outline the current status of the experiment and report the observation of Ramsey interference fringes in the apparatus

Polarization-selective modulation of supercavity resonances originating from bound states in the continuum

Bound states in the continuum (BICs) are widely studied for their ability to confine light, produce sharp resonances for sensing applications and serve as avenues for lasing action with topological characteristics. Primarily, the formation of BICs in periodic photonic band gap structures are driven by symmetry incompatibility; structural manipulation or variation of incidence angle from incoming light. In this work, we report two modalities for driving the formation of BICs in terahertz metasurfaces. At normal incidence, we experimentally confirm polarization driven symmetry-protected BICs by the variation of the linear polarization state of light. In addition, we demonstrate through strong coupling of two radiative modes the formation of capacitively-driven Freidrich-Wintgen BICs, exotic modes which occur in off-Γ points not accessible by symmetry-protected BICs. The capacitance-mediated strong coupling at 0° polarization is verified to have a normalized coupling strength ratio of 4.17% obtained by the Jaynes-Cummings model. Furthermore, when the polarization angle is varied from 0° to 90° (0° ≤ ϕ \u3c 90°), the Freidrich-Wintgen BIC is modulated until it is completely switched off at 90°

Absolute configuration of clemateol

The present study reports the determination of absolute stereochemistry of clemateol, an irregular monoterpene containing an epoxy group, which was isolated as the main component from the essential oil of Calea clematidea (Asteraceae). Its absolute stereochemistry was unambiguously established on the basis of detailed nuclear magnetic resonance (NMR) spectroscopic evidence (3JH-H analysis, derivatization as Mosher's esters and nuclear Overhauser effect (NOESY) spectrum) and also by resonance scattering effects in the single crystal X-ray diffraction (XRD) resolution of its (R)-mandelic acid ester derivative.Fil: Pedroso, Marcelo. Universidade Federal de Santa Maria; BrasilFil: Gehn, Adriana Z.. Universidade Federal de Santa Maria; BrasilFil: Stivanin, Mateus L.. Universidade Federal de Santa Maria; BrasilFil: Larghi, Enrique Leandro. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Química Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Bioquímicas y Farmacéuticas. Instituto de Química Rosario; ArgentinaFil: Burrow, Robert A.. Universidade Federal de Santa Maria; BrasilFil: Resende, Jackson A. L. C.. Universidade Federal Fluminense; BrasilFil: Da Silva, Ubiratan F.. Universidade Federal de Santa Maria; BrasilFil: Mostardeiro, Marco A.. Universidade Federal de Santa Maria; BrasilFil: Dalcol, Ionara I.. Universidade Federal de Santa Maria; BrasilFil: Morel, Ademir F.. Universidade Federal de Santa Maria; Brasi