D-Brane Dynamics and NS5 Rings

We consider the classical motion of a probe D-brane moving in the background geometry of a ring of NS5 branes, assuming that the latter are non-dynamical. We analyse the solutions to the Dirac-Born-Infield (DBI) action governing the approximate dynamics of the system. In the near horizon (throat) approximation we find several exact solutions for the probe brane motion. These are compared to numerical solutions obtained in more general cases. One solution of particular interest is when the probe undergoes oscillatory motion through the centre of the ring (and perpendicular to it). By taking the ring radius sufficiently large, this solution should remain stable to any stringy corrections coming from open-strings stretching between the probe and the NS5-branes along the ring.Comment: 17 pages, Latex, 8 figures; References adde

Dielectric (p,q) Strings in a Throat

We calculate the (p,q) string spectrum in a warped deformed conifold using the dielectric brane method. The spectrum is shown to have the same functional form as in the dual picture of a wrapped D3-brane with electric and magnetic fluxes on its world volume. The agreement is exact in the limit where q is large. We also calculate the dielectric spectrum in the S-dual picture. The spectrum in the S-dual picture has the same form as in the original picture but it is not exactly S-dual invariant due to an interchange of Casimirs of the non-Abelian gauge symmetries. We argue that in order to restore S-duality invariance the non-Abelian brane action should be refined, probably by a better prescription for the non-Abelian trace operation

A Method to Estimate the Boson Mass and to Optimise Sensitivity to Helicity Correlations of tau+tau- Final States

In proton-proton collisions at LHC energies, Z and low mass Higgs bosons would be produced with high and predominantly longitudinal boost with respect to the beam axis. This note describes a new analysis tool devised to handle this situation in cases when such bosons decay to a pair of tau-leptons. The tool reconstructs the rest frame of the tau+tau- pair by finding the boost that minimises the acollinearity between the visible tau decay products. In most cases this gives a reasonable approximation to the rest frame of the decaying boson. It is shown how the reconstructed rest frame allows for a new method of mass estimation. Also a considerable gain in sensitivity to helicity correlations is obtained by analysing the tau-jets in the reconstructed frame instead of using the laboratory momenta and energies, particularly when both tau-leptons decay hadronically.Comment: 13 pages, method extended with 3D boost finde

Geometrical Tachyon Kinks and NS5 Branes

We further investigate the $NS$5 ring background using the tachyon map. Mapping the radion fields to the rolling tachyon helps to explain the motion of a probe $Dp$-brane in this background. It turns out that the radion field becomes tachyonic when the brane is confined to one dimensional motion inside the ring. We find explicit solutions for the geometrical tachyon field that describe stable kink solutions which are similar to those of the open string tachyon. Interestingly in the case of the geometric tachyon, the dynamics is controlled by a cosine potential. In addition, we couple a constant electric field to the probe-brane, but find that the only stable kink solutions occur when there is zero electric field or a critical field value. We also investigate the behaviour of Non-BPS branes in this background, and find that the end state of any probe brane is that of tachyonic matter 'trapped' around the interior of the ring. We conclude by considering compactification of the ring solution in one of the transverse directions.Comment: Latex, 24 pages, 1 eps fig; clarifying comments added to Section 2; typos correcte

Fuzzy Sphere Dynamics and Non-Abelian DBI in Curved Backgrounds

We consider the non-Abelian action for the dynamics of $N Dp'$-branes in the background of $M Dp$-branes, which parameterises a fuzzy sphere using the SU(2) algebra. We find that the curved background leads to collapsing solutions for the fuzzy sphere except when we have $D0$ branes in the $D6$ background, which is a realisation of the gravitational Myers effect. Furthermore we find the equations of motion in the Abelian and non-Abelian theories are identical in the large $N$ limit. By picking a specific ansatz we find that we can incorporate angular momentum into the action, although this imposes restriction upon the dimensionality of the background solutions. We also consider the case of non-Abelian non-BPS branes, and examine the resultant dynamics using world-volume symmetry transformations. We find that the fuzzy sphere always collapses but the solutions are sensitive to the combination of the two conserved charges and we can find expanding solutions with turning points. We go on to consider the coincident $NS$5-brane background, and again construct the non-Abelian theory for both BPS and non-BPS branes. In the latter case we must use symmetry arguments to find additional conserved charges on the world-volumes to solve the equations of motion. We find that in the Non-BPS case there is a turning solution for specific regions of the tachyon and radion fields. Finally we investigate the more general dynamics of fuzzy $\mathbb{S}^{2k}$ in the $Dp$-brane background, and find collapsing solutions in all cases.Comment: 49 pages, 3 figures, Latex; Version to appear in JHE

A 3D searchable database of transgenic zebrafish gal4 and cre lines for functional neuroanatomy studies

Citation: Marquart, G. D., Tabor, K. M., Brown, M., Strykowski, J. L., Varshney, G. K., LaFave, M. C., . . . Burgess, H. A. (2015). A 3D searchable database of transgenic zebrafish gal4 and cre lines for functional neuroanatomy studies. Frontiers in Neural Circuits, 9(November), 1-17. doi:10.3389/fncir.2015.00078Transgenic methods enable the selective manipulation of neurons for functional mapping of neuronal circuits. Using confocal microscopy, we have imaged the cellular-level expression of 109 transgenic lines in live 6 day post fertilization larvae, including 80 Gal4 enhancer trap lines, 9 Cre enhancer trap lines and 20 transgenic lines that express fluorescent proteins in defined gene-specific patterns. Image stacks were acquired at single micron resolution, together with a broadly expressed neural marker, which we used to align enhancer trap reporter patterns into a common 3-dimensional reference space. To facilitate use of this resource, we have written software that enables searching for transgenic lines that label cells within a selectable 3-dimensional region of interest (ROI) or neuroanatomical area. This software also enables the intersectional expression of transgenes to be predicted, a feature which we validated by detecting cells with co-expression of Cre and Gal4. Many of the imaged enhancer trap lines show intrinsic brain-specific expression. However, to increase the utility of lines that also drive expression in non-neuronal tissue we have designed a novel UAS reporter, that suppresses expression in heart, muscle, and skin through the incorporation of microRNA binding sites in a synthetic 3? untranslated region. Finally, we mapped the site of transgene integration, thus providing molecular identification of the expression pattern for most lines. Cumulatively, this library of enhancer trap lines provides genetic access to 70% of the larval brain and is therefore a powerful and broadly accessible tool for the dissection of neural circuits in larval zebrafish. © 2015 Marquart, Tabor, Brown, Strykowski, Varshney, LaFave, Mueller, Burgess, Higashijima and Burgess

Characterisation of serum IgG(T) responses to potential diagnostic antigens for equine cyathostominosis

Cyathostomins are ubiquitous parasitic nematodes of horses. These worms spend substantial periods as intestinal wall stage encysted larvae, which can comprise up to 90% of the total burden. Several million larvae have been reported in individuals. Emergence of these larvae from the gut wall can lead to life-threatening colitis. Faecal egg count tests, increasingly used by horse owners to inform anthelmintic treatments, do not correlate with the intra-host burden of cyathostomins; this represents a key gap in the diagnostic toolbox. Previously, a cyathostomin Gut Associated Larval Antigen was identified as a promising marker for the intra-host stages of infection. Here, cyathostomin Gut Associated Larval Antigen and an additional protein, Cyathostomin Immuno-diagnostic antigen, were investigated to examine their value in providing information on cyathostomin burden. ELISA analyses examined serum IgG(T) responses to recombinant proteins derived from individual cyathostomin species. Receiver Operator Characteristic curve analysis was performed on the ELISA data; proteins with the highest Area Under the Curve values were selected to test protein combinations to investigate which were the most informative in identifying the infection status of individuals. Three cocktail combinations were tested, comprising: (a) Cy-GALA proteins from two species and a Cy-CID protein from a third species (CT3), (b) Cy-GALA proteins from five species (CT5), and (c) all CT5 components, plus a Cy-CID protein from an additional species (CT6). The best predictive values for infection were obtained using CT3 and CT6, with similar values achieved for both. Proteins in CT3 are derived from the most commonly reported species, Cyathostomum catinatum, Cylicocyclus nassatus and Cylicostephanus longibursatus. This combination was selected for future development since it represents a more commercially viable format for a diagnostic test

Transverse Polarization Signatures of Extra Dimensions at Linear Colliders

If significant longitudinal polarization of both the electrons and positrons becomes feasible at a future linear collider(LC), it may be possible to use spin rotators to produce transversely polarized beams. Using the transverse polarization of both beams, new azimuthal spin asymmetries can be formed which will be sensitive probes for new physics beyond the Standard Model. Here we demonstrate that these asymmetries are particularly sensitive to the exchange of Kaluza-Klein towers of gravitons, or other spin-2 fields, that are predicted to exist in higher dimensional theories which address the hierarchy problem. These new asymmetries are shown to be able to extend the search reach for such new physics by more than a factor of two, provide an additional tool for isolating the signatures for spin-2 exchange up to mass scales in excess of $10\sqrt s$, and can be used to help differentiate among the proposed solutions to the hierarchy problem below the production threshold for new particles.Comment: 22 pages, 6 figs. LaTe

An Inflaton Mass Problem in String Inflation from Threshold Corrections to Volume Stabilization

Inflationary models whose vacuum energy arises from a D-term are believed not to suffer from the supergravity eta problem of F-term inflation. That is, D-term models have the desirable property that the inflaton mass can naturally remain much smaller than the Hubble scale. We observe that this advantage is lost in models based on string compactifications whose volume is stabilized by a nonperturbative superpotential: the F-term energy associated with volume stabilization causes the eta problem to reappear. Moreover, any shift symmetries introduced to protect the inflaton mass will typically be lifted by threshold corrections to the volume-stabilizing superpotential. Using threshold corrections computed by Berg, Haack, and Kors, we illustrate this point in the example of the D3-D7 inflationary model, and conclude that inflation is possible, but only for fine-tuned values of the stabilized moduli. More generally, we conclude that inflationary models in stable string compactifications, even D-term models with shift symmetries, will require a certain amount of fine-tuning to avoid this new contribution to the eta problem.Comment: 25 page

Inflation with improved D3-brane potential and the fine tunings associated with the model

We investigate brane-antibrane inflation in a warped deformed conifold background that includes contributions to the potential arising from imaginary anti-self-dual (IASD) fluxes including the term with irrational scaling dimension discovered recently. We find that the model can give rise to required number of e-foldings; observational constraint on COBE normalization is easily satisfied and low value of the tensor to scalar ratio of perturbations is achieved. We observe that these corrections to the effective potential help in relaxing the severe fine tunings associated with the earlier analysis.Comment: 8 pages, 4 figures; typos corrected, minor clarifications and new refs added, to appear in epj